RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 F8VZ95 297 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 MGEA5O60502 916 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 KRT19P08727 400 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 RAB27AP51159 221 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 ARID5AQ03989 594 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 TLE2Q04725 743 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 HELQQ8TDG4 1101 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 PAWRQ96IZ0 340 aaKnown RBP21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 FAM81BQ96LP2 452 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 ADAM2Q99965 735 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 CXCL16Q9H2A7 254 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 PRDM10Q9NQV6 1147 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 ITGA4P13612 1032 aa21.98■■□□□ 1.11
VCPKMT-202ENST00000395860 CAPN2P17655 700 aa21.98■■□□□ 1.11
VCPKMT-202ENST00000395860 SOX5P35711 763 aa21.98■■□□□ 1.11
VCPKMT-202ENST00000395860 KCNJ6P48051 423 aa21.98■■□□□ 1.11
VCPKMT-202ENST00000395860 MYL6P60660 151 aa21.98■■□□□ 1.11
VCPKMT-202ENST00000395860 NOP14P78316 857 aaKnown RBP21.98■■□□□ 1.11
VCPKMT-202ENST00000395860 FAAP100Q0VG06 881 aa21.98■■□□□ 1.11
VCPKMT-202ENST00000395860 SGSM1Q2NKQ1 1148 aa21.98■■□□□ 1.11
VCPKMT-202ENST00000395860 SPOPLQ6IQ16 392 aa21.98■■□□□ 1.11
VCPKMT-202ENST00000395860 RAD9BQ6WBX8 426 aa21.98■■□□□ 1.11
VCPKMT-202ENST00000395860 FMNL3Q8IVF7 1028 aa21.98■■□□□ 1.11
VCPKMT-202ENST00000395860 C1orf127Q8N9H9 656 aa21.98■■□□□ 1.11
VCPKMT-202ENST00000395860 TRAIPQ9BWF2 469 aa21.98■■□□□ 1.11
VCPKMT-202ENST00000395860 ATP11BQ9Y2G3 1177 aa21.98■■□□□ 1.11
VCPKMT-202ENST00000395860 ITGB3P05106 788 aa21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 GCNT1Q02742 428 aa21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 MTF1Q14872 753 aa21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 TDRD12Q587J7 1177 aaKnown RBP21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 GLRA4Q5JXX5 417 aa21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 SCARA3Q6AZY7 606 aa21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 ENOSF1Q7L5Y1 443 aa21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 KAT5Q92993 513 aa21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 ZMAT2Q96NC0 199 aaKnown RBP21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 GPR88Q9GZN0 384 aa21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 MCOLN1Q9GZU1 580 aa21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 HIPK3Q9H422 1215 aa21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 NHEJ1Q9H9Q4 299 aaPredicted RBP21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 DPP3Q9NY33 737 aa21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 R3HCC1Q9Y3T6 440 aaKnown RBP21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 GFPT2O94808 682 aa21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 ASS1P00966 412 aaKnown RBP21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 SERPING1P05155 500 aa21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 PNMA6AP0CW24 399 aaPredicted RBP21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 FERP16591 822 aa21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 KREMEN1Q96MU8 473 aa21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 TSPAN18Q96SJ8 248 aa21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 APOBEC3GQ9HC16 384 aaKnown RBP21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 ARHGAP20Q9P2F6 1191 aa21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 ITGA11Q9UKX5 1188 aa21.97■■□□□ 1.11
VCPKMT-202ENST00000395860 SCN5AQ14524 2016 aa21.96■■□□□ 1.11
VCPKMT-202ENST00000395860 UMODL1Q5DID0 1318 aa21.96■■□□□ 1.11
VCPKMT-202ENST00000395860 PLEKP08567 350 aaPredicted RBP21.96■■□□□ 1.11
VCPKMT-202ENST00000395860 SKIP12755 728 aa21.96■■□□□ 1.11
VCPKMT-202ENST00000395860 KLHL30Q0D2K2 578 aa21.96■■□□□ 1.11
VCPKMT-202ENST00000395860 XKR4Q5GH76 650 aa21.96■■□□□ 1.11
VCPKMT-202ENST00000395860 HGSNATQ68CP4 663 aa21.96■■□□□ 1.11
VCPKMT-202ENST00000395860 BEST2Q8NFU1 509 aa21.96■■□□□ 1.11
VCPKMT-202ENST00000395860 SIX4Q9UIU6 781 aa21.96■■□□□ 1.11
VCPKMT-202ENST00000395860 NUB1Q9Y5A7 615 aa21.96■■□□□ 1.11
VCPKMT-202ENST00000395860 A0A0U1RQF3 1178 aa21.95■■□□□ 1.1
VCPKMT-202ENST00000395860 SMIM28A0A1B0GU29 152 aa21.95■■□□□ 1.1
VCPKMT-202ENST00000395860 FOXN3O00409 490 aaPredicted RBP21.95■■□□□ 1.1
VCPKMT-202ENST00000395860 XPOTO43592 962 aaKnown RBP21.95■■□□□ 1.1
VCPKMT-202ENST00000395860 NBNO60934 754 aa21.95■■□□□ 1.1
VCPKMT-202ENST00000395860 ZNF623O75123 536 aa21.95■■□□□ 1.1
VCPKMT-202ENST00000395860 CCDC172P0C7W6 258 aa21.95■■□□□ 1.1
VCPKMT-202ENST00000395860 KCNE1P15382 129 aa21.95■■□□□ 1.1
VCPKMT-202ENST00000395860 GUCY2FP51841 1108 aa21.95■■□□□ 1.1
VCPKMT-202ENST00000395860 ZBTB6Q15916 424 aa21.95■■□□□ 1.1
VCPKMT-202ENST00000395860 ZNF699Q32M78 642 aa21.95■■□□□ 1.1
VCPKMT-202ENST00000395860 IRF2BP2Q7Z5L9 587 aa21.95■■□□□ 1.1
VCPKMT-202ENST00000395860 NECAB2Q7Z6G3 386 aa21.95■■□□□ 1.1
VCPKMT-202ENST00000395860 MRPL10Q7Z7H8 261 aaKnown RBP21.95■■□□□ 1.1
VCPKMT-202ENST00000395860 C17orf53Q8N3J3 647 aaPredicted RBP21.95■■□□□ 1.1
VCPKMT-202ENST00000395860 LPPQ93052 612 aa21.95■■□□□ 1.1
VCPKMT-202ENST00000395860 CCDC42Q96M95 316 aa21.95■■□□□ 1.1
VCPKMT-202ENST00000395860 PPP1R12CQ9BZL4 782 aa21.95■■□□□ 1.1
VCPKMT-202ENST00000395860 DEF6Q9H4E7 631 aa21.95■■□□□ 1.1
VCPKMT-202ENST00000395860 UBQLN1Q9UMX0 589 aaKnown RBP21.95■■□□□ 1.1
VCPKMT-202ENST00000395860 IBSPP21815 317 aaPredicted RBP21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 TBXAS1P24557 533 aaPredicted RBP21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 POLR2BP30876 1174 aaKnown RBP21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 CYLC1P35663 651 aaPredicted RBP21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 EIF4A3P38919 411 aaKnown RBP21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 USP8P40818 1118 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 TOGARAM2Q6ZUX3 1019 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 CCDC170Q8IYT3 715 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 TMEM130Q8N3G9 435 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 SHC3Q92529 594 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 TAF4BQ92750 862 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 PGBD4Q96DM1 585 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 FTHL17Q9BXU8 183 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 RGS18Q9NS28 235 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 RNF19AQ9NV58 838 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 AGAP1Q9UPQ3 857 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 GIT1Q9Y2X7 761 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 BZW2Q9Y6E2 419 aaKnown RBP21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 EPN1Q9Y6I3 576 aaPredicted RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms