RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 MRFAP1Q9Y605 127 aa20.79■□□□□ 0.92
LMNB1-202ENST00000395354 A0A087X0T9 212 aa20.78■□□□□ 0.92
LMNB1-202ENST00000395354 ACKR2O00590 384 aa20.78■□□□□ 0.92
LMNB1-202ENST00000395354 CLDN3O15551 220 aa20.78■□□□□ 0.92
LMNB1-202ENST00000395354 PARNO95453 639 aaKnown RBP20.78■□□□□ 0.92
LMNB1-202ENST00000395354 FAM228BP0C875 321 aa20.78■□□□□ 0.92
LMNB1-202ENST00000395354 GPNMBQ14956 572 aa20.78■□□□□ 0.92
LMNB1-202ENST00000395354 FAM187BQ17R55 369 aa20.78■□□□□ 0.92
LMNB1-202ENST00000395354 C15orf39Q6ZRI6 1047 aa20.78■□□□□ 0.92
LMNB1-202ENST00000395354 TSHZ1Q6ZSZ6 1077 aa20.78■□□□□ 0.92
LMNB1-202ENST00000395354 SV2AQ7L0J3 742 aa20.78■□□□□ 0.92
LMNB1-202ENST00000395354 FAM228AQ86W67 206 aa20.78■□□□□ 0.92
LMNB1-202ENST00000395354 FNBP1Q96RU3 617 aa20.78■□□□□ 0.92
LMNB1-202ENST00000395354 UBE2TQ9NPD8 197 aaPredicted RBP20.78■□□□□ 0.92
LMNB1-202ENST00000395354 RAB20Q9NX57 234 aa20.78■□□□□ 0.92
LMNB1-202ENST00000395354 ADAMTS1Q9UHI8 967 aa20.78■□□□□ 0.92
LMNB1-202ENST00000395354 ST3GAL5Q9UNP4 418 aa20.78■□□□□ 0.92
LMNB1-202ENST00000395354 GPR182O15218 404 aa20.77■□□□□ 0.92
LMNB1-202ENST00000395354 NBNO60934 754 aa20.77■□□□□ 0.92
LMNB1-202ENST00000395354 ERLIN2O94905 339 aa20.77■□□□□ 0.92
LMNB1-202ENST00000395354 EDN1P05305 212 aa20.77■□□□□ 0.92
LMNB1-202ENST00000395354 CD52P31358 61 aa20.77■□□□□ 0.92
LMNB1-202ENST00000395354 MATR3P43243 847 aaKnown RBP eCLIP20.77■□□□□ 0.92
LMNB1-202ENST00000395354 MFAP3P55082 362 aa20.77■□□□□ 0.92
LMNB1-202ENST00000395354 MCL1Q07820 350 aa20.77■□□□□ 0.92
LMNB1-202ENST00000395354 NCBP1Q09161 790 aaKnown RBP20.77■□□□□ 0.92
LMNB1-202ENST00000395354 NFX1Q12986 1120 aaKnown RBP20.77■□□□□ 0.92
LMNB1-202ENST00000395354 PRPF4BQ13523 1007 aaKnown RBP20.77■□□□□ 0.92
LMNB1-202ENST00000395354 AMHR2Q16671 573 aa20.77■□□□□ 0.92
LMNB1-202ENST00000395354 TRIM58Q8NG06 486 aa20.77■□□□□ 0.92
LMNB1-202ENST00000395354 ZBTB45Q96K62 511 aaPredicted RBP20.77■□□□□ 0.92
LMNB1-202ENST00000395354 RBAKQ9NYW8 714 aaPredicted RBP20.77■□□□□ 0.92
LMNB1-202ENST00000395354 PADI3Q9ULW8 664 aa20.77■□□□□ 0.92
LMNB1-202ENST00000395354 NENFQ9UMX5 172 aa20.77■□□□□ 0.92
LMNB1-202ENST00000395354 ANO9A1A5B4 782 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 BTNL10A8MVZ5 291 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 B4GALT5O43286 388 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 DLATP10515 647 aaKnown RBP20.76■□□□□ 0.91
LMNB1-202ENST00000395354 AP3M2P53677 418 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 PAK2Q13177 524 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 NAB2Q15742 525 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 MFSD5Q6N075 450 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 ARHGEF19Q8IW93 802 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 NT5C1BQ96P26 610 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 POP1Q99575 1024 aaKnown RBP20.76■□□□□ 0.91
LMNB1-202ENST00000395354 ANKFY1Q9P2R3 1169 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 TFR2Q9UP52 801 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 TTLL13PA6NNM8 815 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 TSPAN1O60635 241 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 TACC1O75410 805 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 PROZP22891 400 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 ACOT2P49753 483 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 SURF1Q15526 300 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 ENOSF1Q7L5Y1 443 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 GPIHBP1Q8IV16 184 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 TMEM199Q8N511 208 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 SEMA4DQ92854 862 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 CGRRF1Q99675 332 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 ERVK-5Q9HDB9 667 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 CDC23Q9UJX2 597 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 NAGPAQ9UK23 515 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 INTUQ9ULD6 942 aa20.76■□□□□ 0.91
LMNB1-202ENST00000395354 FOXN3O00409 490 aaPredicted RBP20.75■□□□□ 0.91
LMNB1-202ENST00000395354 ABLIM1O14639 778 aa20.75■□□□□ 0.91
LMNB1-202ENST00000395354 OGTO15294 1046 aa20.75■□□□□ 0.91
LMNB1-202ENST00000395354 ARF4P18085 180 aaPredicted RBP20.75■□□□□ 0.91
LMNB1-202ENST00000395354 RFC2P35250 354 aa20.75■□□□□ 0.91
LMNB1-202ENST00000395354 ENOX2Q16206 610 aaKnown RBP20.75■□□□□ 0.91
LMNB1-202ENST00000395354 ARHGAP44Q17R89 818 aa20.75■□□□□ 0.91
LMNB1-202ENST00000395354 TMEM132AQ24JP5 1023 aa20.75■□□□□ 0.91
LMNB1-202ENST00000395354 ZACNQ401N2 412 aa20.75■□□□□ 0.91
LMNB1-202ENST00000395354 DEFB128Q7Z7B8 93 aa20.75■□□□□ 0.91
LMNB1-202ENST00000395354 BRSK2Q8IWQ3 736 aa20.75■□□□□ 0.91
LMNB1-202ENST00000395354 SLC30A5Q8TAD4 765 aa20.75■□□□□ 0.91
LMNB1-202ENST00000395354 TAS1R2Q8TE23 839 aa20.75■□□□□ 0.91
LMNB1-202ENST00000395354 SYT11Q9BT88 431 aa20.75■□□□□ 0.91
LMNB1-202ENST00000395354 PTPRHQ9HD43 1115 aa20.75■□□□□ 0.91
LMNB1-202ENST00000395354 TOPORSQ9NS56 1045 aaPredicted RBP20.75■□□□□ 0.91
LMNB1-202ENST00000395354 DUSP10Q9Y6W6 482 aa20.75■□□□□ 0.91
LMNB1-202ENST00000395354 FAM189A1O60320 539 aa20.74■□□□□ 0.91
LMNB1-202ENST00000395354 CXCL10P02778 98 aa20.74■□□□□ 0.91
LMNB1-202ENST00000395354 C4BPAP04003 597 aaKnown RBP20.74■□□□□ 0.91
LMNB1-202ENST00000395354 CSF2RAP15509 400 aa20.74■□□□□ 0.91
LMNB1-202ENST00000395354 SYN1P17600 705 aa20.74■□□□□ 0.91
LMNB1-202ENST00000395354 HOXA11P31270 313 aaPredicted RBP20.74■□□□□ 0.91
LMNB1-202ENST00000395354 ALKBH5Q6P6C2 394 aaKnown RBP20.74■□□□□ 0.91
LMNB1-202ENST00000395354 MPZL3Q6UWV2 235 aa20.74■□□□□ 0.91
LMNB1-202ENST00000395354 HELQQ8TDG4 1101 aa20.74■□□□□ 0.91
LMNB1-202ENST00000395354 ZNF516Q92618 1163 aa20.74■□□□□ 0.91
LMNB1-202ENST00000395354 CPB2Q96IY4 423 aa20.74■□□□□ 0.91
LMNB1-202ENST00000395354 ALS2CR12Q96Q35 445 aa20.74■□□□□ 0.91
LMNB1-202ENST00000395354 TCHPQ9BT92 498 aa20.74■□□□□ 0.91
LMNB1-202ENST00000395354 PCDH10Q9P2E7 1040 aa20.74■□□□□ 0.91
LMNB1-202ENST00000395354 ZMYND8Q9ULU4 1186 aaPredicted RBP20.74■□□□□ 0.91
LMNB1-202ENST00000395354 TNFSF13BQ9Y275 285 aa20.74■□□□□ 0.91
LMNB1-202ENST00000395354 NR2E3Q9Y5X4 410 aa20.74■□□□□ 0.91
LMNB1-202ENST00000395354 CNTNAP2Q9UHC6 1331 aa20.74■□□□□ 0.91
LMNB1-202ENST00000395354 SCN5AQ14524 2016 aa20.73■□□□□ 0.91
LMNB1-202ENST00000395354 A0A1B0GUA9 196 aa20.73■□□□□ 0.91
LMNB1-202ENST00000395354 MACROD2A1Z1Q3 448 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms