RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 FAM20AQ96MK3 541 aa15.22■□□□□ 0.03
CLIP2-203ENST00000395060 FHDC1Q9C0D6 1143 aaPredicted RBP15.22■□□□□ 0.03
CLIP2-203ENST00000395060 NUMBLQ9Y6R0 609 aa15.22■□□□□ 0.03
CLIP2-203ENST00000395060 CDH16O75309 829 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 TPBGLP0DKB5 382 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 FGFR1P11362 822 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 PLS3P13797 630 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 CYP11B1P15538 503 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 SREBF1P36956 1147 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 PLCB3Q01970 1234 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 MDH1BQ5I0G3 518 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 AP1ARQ63HQ0 302 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 CNKSR1Q969H4 720 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 TSC22D3Q99576 134 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 TMEM109Q9BVC6 243 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 UNC45AQ9H3U1 944 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 TRABDQ9H4I3 376 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 SORBS3O60504 671 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 ADRB2P07550 413 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 MMP10P09238 476 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 CALB2P22676 271 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 IVDP26440 423 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 EFTUD2Q15029 972 aaKnown RBP eCLIP15.21■□□□□ 0.03
CLIP2-203ENST00000395060 HHATQ5VTY9 493 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 ANKS1BQ7Z6G8 1248 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 DAW1Q8N136 415 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 PRR11Q96HE9 360 aaPredicted RBP15.21■□□□□ 0.03
CLIP2-203ENST00000395060 DDX50Q9BQ39 737 aaKnown RBP15.21■□□□□ 0.03
CLIP2-203ENST00000395060 ZNF577Q9BSK1 485 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 HSPBP1Q9NZL4 362 aa15.21■□□□□ 0.03
CLIP2-203ENST00000395060 ITIH2P19823 946 aa15.21■□□□□ 0.02
CLIP2-203ENST00000395060 HOXA7P31268 230 aaPredicted RBP15.21■□□□□ 0.02
CLIP2-203ENST00000395060 PIK3CAP42336 1068 aa15.21■□□□□ 0.02
CLIP2-203ENST00000395060 MAGEA4P43358 317 aa15.21■□□□□ 0.02
CLIP2-203ENST00000395060 PEX3P56589 373 aa15.21■□□□□ 0.02
CLIP2-203ENST00000395060 JAG1P78504 1218 aa15.21■□□□□ 0.02
CLIP2-203ENST00000395060 AP3B2Q13367 1082 aa15.21■□□□□ 0.02
CLIP2-203ENST00000395060 Q4G0T1 1027 aa15.21■□□□□ 0.02
CLIP2-203ENST00000395060 KHDC1Q4VXA5 237 aaKnown RBP15.21■□□□□ 0.02
CLIP2-203ENST00000395060 SYDE2Q5VT97 1194 aa15.21■□□□□ 0.02
CLIP2-203ENST00000395060 PCNX4Q63HM2 1172 aa15.21■□□□□ 0.02
CLIP2-203ENST00000395060 DSTYKQ6XUX3 929 aa15.21■□□□□ 0.02
CLIP2-203ENST00000395060 C15orf52Q6ZUT6 534 aaKnown RBP15.21■□□□□ 0.02
CLIP2-203ENST00000395060 RNF217Q8TC41 542 aa15.21■□□□□ 0.02
CLIP2-203ENST00000395060 TAS1R2Q8TE23 839 aa15.21■□□□□ 0.02
CLIP2-203ENST00000395060 STK32AQ8WU08 396 aa15.21■□□□□ 0.02
CLIP2-203ENST00000395060 POMGNT1Q8WZA1 660 aa15.21■□□□□ 0.02
CLIP2-203ENST00000395060 NOCTQ9UK39 431 aaKnown RBP15.21■□□□□ 0.02
CLIP2-203ENST00000395060 CORO1CQ9ULV4 474 aaPredicted RBP15.21■□□□□ 0.02
CLIP2-203ENST00000395060 MAPK13O15264 365 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 EIF3DO15371 548 aaKnown RBP eCLIP15.2■□□□□ 0.02
CLIP2-203ENST00000395060 CFHP08603 1231 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 INHBEP58166 350 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 PADI6Q6TGC4 694 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 ZC3H18Q86VM9 953 aaKnown RBP15.2■□□□□ 0.02
CLIP2-203ENST00000395060 SCYL3Q8IZE3 742 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 PSPC1Q8WXF1 523 aaKnown RBP15.2■□□□□ 0.02
CLIP2-203ENST00000395060 CCDC77Q9BR77 488 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 LRRC19Q9H756 370 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 LRRD1A4D1F6 860 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 GH2P01242 217 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 T-ENOLP0DO92 83 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 ECE1P42892 770 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 SEPT7Q16181 437 aaKnown RBP15.2■□□□□ 0.02
CLIP2-203ENST00000395060 C1orf220Q5T0J3 134 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 SP8Q8IXZ3 490 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 ZBED8Q8IZ13 594 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 ANKRD35Q8N283 1001 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 C11orf70Q9BRQ4 267 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 TRAIPQ9BWF2 469 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 DCLK3Q9C098 648 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 DMAC2Q9NW81 257 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 CYP39A1Q9NYL5 469 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 WHRNQ9P202 907 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 ZFP69BQ9UJL9 534 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 ZNF148Q9UQR1 794 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 GAKO14976 1311 aa15.2■□□□□ 0.02
CLIP2-203ENST00000395060 ZBED4O75132 1171 aa15.19■□□□□ 0.02
CLIP2-203ENST00000395060 KRT36O76013 467 aa15.19■□□□□ 0.02
CLIP2-203ENST00000395060 CCNB1P14635 433 aa15.19■□□□□ 0.02
CLIP2-203ENST00000395060 HOXA10P31260 410 aaPredicted RBP15.19■□□□□ 0.02
CLIP2-203ENST00000395060 GAD2Q05329 585 aa15.19■□□□□ 0.02
CLIP2-203ENST00000395060 RHBDF2Q6PJF5 856 aa15.19■□□□□ 0.02
CLIP2-203ENST00000395060 STXBP4Q6ZWJ1 553 aa15.19■□□□□ 0.02
CLIP2-203ENST00000395060 SIAH1Q8IUQ4 282 aa15.19■□□□□ 0.02
CLIP2-203ENST00000395060 LMNTD2Q8IXW0 634 aa15.19■□□□□ 0.02
CLIP2-203ENST00000395060 SLC7A6OSQ96CW6 309 aaPredicted RBP15.19■□□□□ 0.02
CLIP2-203ENST00000395060 POLR3CQ9BUI4 534 aaPredicted RBP15.19■□□□□ 0.02
CLIP2-203ENST00000395060 TMX4Q9H1E5 349 aaPredicted RBP15.19■□□□□ 0.02
CLIP2-203ENST00000395060 KIAA1586Q9HCI6 787 aa15.19■□□□□ 0.02
CLIP2-203ENST00000395060 ARFGEF1Q9Y6D6 1849 aa15.19■□□□□ 0.02
CLIP2-203ENST00000395060 TCF4P15884 667 aa15.19■□□□□ 0.02
CLIP2-203ENST00000395060 DYNLT1P63172 113 aa15.19■□□□□ 0.02
CLIP2-203ENST00000395060 RCN2Q14257 317 aa15.19■□□□□ 0.02
CLIP2-203ENST00000395060 RCN1Q15293 331 aa15.19■□□□□ 0.02
CLIP2-203ENST00000395060 CYP1B1Q16678 543 aa15.19■□□□□ 0.02
CLIP2-203ENST00000395060 LVRNQ6Q4G3 990 aa15.19■□□□□ 0.02
CLIP2-203ENST00000395060 TEKT4Q8WW24 435 aa15.19■□□□□ 0.02
CLIP2-203ENST00000395060 CRYGNQ8WXF5 182 aa15.19■□□□□ 0.02
CLIP2-203ENST00000395060 DNAJC9Q8WXX5 260 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms