RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 KCNA1Q09470 495 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 NOLC1Q14978 699 aaKnown RBP eCLIP9.68□□□□□ -0.86
ATG4A-205ENST00000394892 SLC39A14Q15043 492 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 ENOX2Q16206 610 aaKnown RBP9.68□□□□□ -0.86
ATG4A-205ENST00000394892 CCDC149Q6ZUS6 474 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 SMG7Q92540 1137 aaKnown RBP9.68□□□□□ -0.86
ATG4A-205ENST00000394892 LARP4BQ92615 738 aaKnown RBP9.68□□□□□ -0.86
ATG4A-205ENST00000394892 CDK5RAP3Q96JB5 506 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 TCHPQ9BT92 498 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 RPP25Q9BUL9 199 aaKnown RBP9.68□□□□□ -0.86
ATG4A-205ENST00000394892 KCNK12Q9HB15 430 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 HCFC1R1Q9NWW0 138 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 ANKFY1Q9P2R3 1169 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 ODF2LQ9ULJ1 636 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 MORC2Q9Y6X9 1032 aaPredicted RBP9.68□□□□□ -0.86
ATG4A-205ENST00000394892 A0A0B4J269 797 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 PRR23AA6NEV1 266 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 CLDN3O15551 220 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 TRAK2O60296 914 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 SEC24AO95486 1093 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 NPR3P17342 541 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 ADSSP30520 456 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 NASPP49321 788 aaPredicted RBP9.67□□□□□ -0.86
ATG4A-205ENST00000394892 SMTNP53814 917 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 PKP1Q13835 747 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 VARS2Q5ST30 1063 aaKnown RBP9.67□□□□□ -0.86
ATG4A-205ENST00000394892 SLC8B1Q6J4K2 584 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 CRELD2Q6UXH1 353 aaPredicted RBP9.67□□□□□ -0.86
ATG4A-205ENST00000394892 OTOP3Q7RTS5 596 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 ASCL5Q7RTU5 278 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 ERMP1Q7Z2K6 904 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 SFR1Q86XK3 245 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 MAP4K3Q8IVH8 894 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 MYCT1Q8N699 235 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 TMEM105Q8N8V8 129 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 FLCNQ8NFG4 579 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 ITFG1Q8TB96 612 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 SNX21Q969T3 373 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 CALML4Q96GE6 196 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 FAM84AQ96KN4 292 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 UROC1Q96N76 676 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 PANK2Q9BZ23 570 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 PARVGQ9HBI0 331 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 ZDHHC7Q9NXF8 308 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 LARSQ9P2J5 1176 aaKnown RBP9.67□□□□□ -0.86
ATG4A-205ENST00000394892 EPS15L1Q9UBC2 864 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 FBXL21Q9UKT6 434 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 BACE2Q9Y5Z0 518 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 CDY1Q9Y6F8 540 aa9.67□□□□□ -0.86
ATG4A-205ENST00000394892 PLXNA3P51805 1871 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 WDR27A2RRH5 827 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 ANHXE9PGG2 379 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 K7ENM7 598 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 SPTLC1O15269 473 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 CCL16O15467 120 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 PI15O43692 258 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 STX6O43752 255 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 ABLIM3O94929 683 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 FAM13AO94988 1023 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 C8AP07357 584 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 CLTAP09496 248 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 LAMP2P13473 410 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 PDCP20941 246 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 RFX1P22670 979 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 LRPAP1P30533 357 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 AARSP49588 968 aaKnown RBP eCLIP9.66□□□□□ -0.86
ATG4A-205ENST00000394892 CASP5P51878 434 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 YARSP54577 528 aaKnown RBP9.66□□□□□ -0.86
ATG4A-205ENST00000394892 ROR1Q01973 937 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 ELAVL2Q12926 359 aaKnown RBP9.66□□□□□ -0.86
ATG4A-205ENST00000394892 STRN3Q13033 797 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 AXDND1Q5T1B0 1012 aaPredicted RBP9.66□□□□□ -0.86
ATG4A-205ENST00000394892 CWF19L1Q69YN2 538 aaKnown RBP9.66□□□□□ -0.86
ATG4A-205ENST00000394892 ELMSAN1Q6PJG2 1045 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 CYP26C1Q6V0L0 522 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 DYMQ7RTS9 669 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 ZNF720Q7Z2F6 126 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 GRASPQ7Z6J2 395 aaPredicted RBP9.66□□□□□ -0.86
ATG4A-205ENST00000394892 FRMD5Q7Z6J6 570 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 SLC44A3Q8N4M1 653 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 LINC00301Q8NCQ3 95 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 GLIS3Q8NEA6 775 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 SLC7A14Q8TBB6 771 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 DDX12PQ92771 950 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 CHAMP1Q96JM3 812 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 SUSD3Q96L08 255 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 RTP3Q9BQQ7 232 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 ST6GALNAC4Q9H4F1 302 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 TOPORSQ9NS56 1045 aaPredicted RBP9.66□□□□□ -0.86
ATG4A-205ENST00000394892 TFIP11Q9UBB9 837 aaKnown RBP9.66□□□□□ -0.86
ATG4A-205ENST00000394892 DNMT3BQ9UBC3 853 aaKnown RBP9.66□□□□□ -0.86
ATG4A-205ENST00000394892 CPSF3Q9UKF6 684 aaKnown RBP9.66□□□□□ -0.86
ATG4A-205ENST00000394892 TIMM13Q9Y5L4 95 aaPredicted RBP9.66□□□□□ -0.86
ATG4A-205ENST00000394892 STYXL1Q9Y6J8 313 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 DMDP11532 3685 aa9.66□□□□□ -0.86
ATG4A-205ENST00000394892 FRMD3A2A2Y4 597 aa9.65□□□□□ -0.86
ATG4A-205ENST00000394892 KRBA1A5PL33 1030 aa9.65□□□□□ -0.86
ATG4A-205ENST00000394892 STK25O00506 426 aa9.65□□□□□ -0.86
ATG4A-205ENST00000394892 OGTO15294 1046 aa9.65□□□□□ -0.86
ATG4A-205ENST00000394892 HNRNPA1P09651 372 aaKnown RBP eCLIP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms