RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 NAALADL1Q9UQQ1 740 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 SYNGAP1Q96PV0 1343 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 FER1L6Q2WGJ9 1857 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 TESPA1A2RU30 521 aaPredicted RBP9.35□□□□□ -0.91
RTN4-206ENST00000394611 DKC1O60832 514 aaKnown RBP eCLIP9.35□□□□□ -0.91
RTN4-206ENST00000394611 RALAP11233 206 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 MSX2P35548 267 aaPredicted RBP9.35□□□□□ -0.91
RTN4-206ENST00000394611 ARSEP51690 589 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 SEMA3FQ13275 785 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 AUHQ13825 339 aaKnown RBP9.35□□□□□ -0.91
RTN4-206ENST00000394611 PLCB4Q15147 1175 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 CNGA2Q16280 664 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 SLFN13Q68D06 897 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 IZUMO2Q6UXV1 221 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 LRRC55Q6ZSA7 311 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 NLRP9Q7RTR0 991 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 DGKHQ86XP1 1220 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 RHPN2Q8IUC4 686 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 MMTAG2Q9BU76 263 aaKnown RBP9.35□□□□□ -0.91
RTN4-206ENST00000394611 TBC1D10AQ9BXI6 508 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 VCX3BQ9H321 246 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 CLIC5Q9NZA1 410 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 ARAP2Q8WZ64 1704 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 PHF2O75151 1096 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 MYL1P05976 194 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 ARL1P40616 181 aaPredicted RBP9.35□□□□□ -0.91
RTN4-206ENST00000394611 NUMBP49757 651 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 DBN1Q16643 649 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 SEZ6Q53EL9 994 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 PPP6R3Q5H9R7 873 aaPredicted RBP9.35□□□□□ -0.91
RTN4-206ENST00000394611 LARGE2Q8N3Y3 721 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 SCG3Q8WXD2 468 aaKnown RBP9.35□□□□□ -0.91
RTN4-206ENST00000394611 DNAJC1Q96KC8 554 aaKnown RBP9.35□□□□□ -0.91
RTN4-206ENST00000394611 METTL14Q9HCE5 456 aaKnown RBP9.35□□□□□ -0.91
RTN4-206ENST00000394611 CD209Q9NNX6 404 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 BATF3Q9NR55 127 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 TOPORSQ9NS56 1045 aaPredicted RBP9.35□□□□□ -0.91
RTN4-206ENST00000394611 KDM3AQ9Y4C1 1321 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 COL4A5P29400 1685 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 HNRNPDLO14979 420 aaKnown RBP9.34□□□□□ -0.91
RTN4-206ENST00000394611 NOL4O94818 638 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 SEC24DO94855 1032 aaPredicted RBP9.34□□□□□ -0.91
RTN4-206ENST00000394611 PRLRP16471 622 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 CYP11B2P19099 503 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 CHRNA3P32297 505 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 MAPK10P53779 464 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 FUT2Q10981 343 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 MAP7Q14244 749 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 PKN2Q16513 984 aaKnown RBP9.34□□□□□ -0.91
RTN4-206ENST00000394611 RFWD3Q6PCD5 774 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 IYDQ6PHW0 289 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 ATP8B4Q8TF62 1192 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 IQCDQ96DY2 449 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 PARVGQ9HBI0 331 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 CHD4Q14839 1912 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 FAM47DPA6NHR8 397 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 PEX1O43933 1283 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 PDE5AO76074 875 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 RARAP10276 462 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 FOXD4Q12950 439 aaPredicted RBP9.34□□□□□ -0.91
RTN4-206ENST00000394611 SEPT2Q15019 361 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 TRIP10Q15642 601 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 SHROOM1Q2M3G4 852 aaPredicted RBP9.34□□□□□ -0.91
RTN4-206ENST00000394611 CBWD6Q4V339 395 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 XKR9Q5GH70 373 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 CBWD3Q5JTY5 395 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 CBWD5Q5RIA9 395 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 SH2D4BQ5SQS7 431 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 RCSD1Q6JBY9 416 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 CATSPER3Q86XQ3 398 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 FAM81BQ96LP2 452 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 FAM111AQ96PZ2 611 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 TRIM55Q9BYV6 548 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 ACSS2Q9NR19 701 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 CCDC88AQ3V6T2 1871 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 PODXLO00592 558 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 XPO1O14980 1071 aaKnown RBP9.34□□□□□ -0.91
RTN4-206ENST00000394611 COILP38432 576 aaPredicted RBP9.34□□□□□ -0.91
RTN4-206ENST00000394611 FMO5P49326 533 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 XRCC4Q13426 336 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 QRICH1Q2TAL8 776 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 KCNT1Q5JUK3 1230 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 SLC47A2Q86VL8 602 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 EGFL6Q8IUX8 553 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 ARID3BQ8IVW6 561 aaPredicted RBP9.34□□□□□ -0.91
RTN4-206ENST00000394611 ZNF513Q8N8E2 541 aaPredicted RBP9.34□□□□□ -0.91
RTN4-206ENST00000394611 ARL10Q8N8L6 244 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 WDR66Q8TBY9 1149 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 AGPAT1Q99943 283 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 MAGEF1Q9HAY2 307 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 RAB20Q9NX57 234 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 NOP56O00567 594 aaKnown RBP9.34□□□□□ -0.91
RTN4-206ENST00000394611 ECE2O60344 883 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 ZMPSTE24O75844 475 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 RASA1P20936 1047 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 ADRA1DP25100 572 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 MARK3P27448 753 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 SOX10P56693 466 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 ATP13A4Q4VNC1 1196 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 WDR44Q5JSH3 913 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms