RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 ENPEPQ07075 957 aa16.14■□□□□ 0.17
GPC3-202ENST00000394299 ENOSF1Q7L5Y1 443 aa16.14■□□□□ 0.17
GPC3-202ENST00000394299 VIPAS39Q9H9C1 493 aa16.14■□□□□ 0.17
GPC3-202ENST00000394299 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.14■□□□□ 0.17
GPC3-202ENST00000394299 ADAM21Q9UKJ8 722 aa16.14■□□□□ 0.17
GPC3-202ENST00000394299 GTF3C4Q9UKN8 822 aa16.14■□□□□ 0.17
GPC3-202ENST00000394299 TCRBV7S2A1N4TA0A589 114 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 OGTO15294 1046 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 PYGMP11217 842 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 PEX5P50542 639 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 GPS2Q13227 327 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 ATF7IP2Q5U623 682 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 ZNF771Q7L3S4 317 aaPredicted RBP16.13■□□□□ 0.17
GPC3-202ENST00000394299 EFCAB13Q8IY85 973 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 MCOLN2Q8IZK6 566 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 NEUROG2Q9H2A3 272 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 FZD8Q9H461 694 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 IFT122Q9HBG6 1241 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 PTPRHQ9HD43 1115 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 ERAP1Q9NZ08 941 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 CPSF3Q9UKF6 684 aaKnown RBP16.13■□□□□ 0.17
GPC3-202ENST00000394299 A0A087WZ62 844 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 GJB6O95452 261 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 SCP2P22307 547 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 CCNA1P78396 465 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 MBTD1Q05BQ5 628 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 MCL1Q07820 350 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 C11orf63Q6NUN7 778 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 DPP9Q86TI2 863 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 MSL3Q8N5Y2 521 aaKnown RBP16.13■□□□□ 0.17
GPC3-202ENST00000394299 RBBP8NLQ8NC74 664 aaPredicted RBP16.13■□□□□ 0.17
GPC3-202ENST00000394299 ZSWIM1Q9BR11 485 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 FDXACB1Q9BRP7 624 aaPredicted RBP16.13■□□□□ 0.17
GPC3-202ENST00000394299 TRIM31Q9BZY9 425 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 KATNBL1Q9H079 304 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 CARD9Q9H257 536 aa16.13■□□□□ 0.17
GPC3-202ENST00000394299 GPR25O00155 361 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 ACKR2O00590 384 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 SPOPO43791 374 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 WEE2P0C1S8 567 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 GNA15P30679 374 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 GTF2A2P52657 109 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 PTENP60484 403 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 TCEAL1Q15170 157 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 ZNF568Q3ZCX4 644 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 HSP90B2PQ58FF3 399 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 GPR142Q7Z601 462 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 CD101Q93033 1021 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 CPB2Q96IY4 423 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 CALR3Q96L12 384 aaKnown RBP16.12■□□□□ 0.17
GPC3-202ENST00000394299 TRIM51Q9BSJ1 452 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 IVNS1ABPQ9Y6Y0 642 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 SIP14410 1827 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 ADCY6O43306 1168 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 CELF2O95319 508 aaKnown RBP16.12■□□□□ 0.17
GPC3-202ENST00000394299 HOXC6P09630 235 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 CXCL8P10145 99 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 TNFRSF8P28908 595 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 ECHS1P30084 290 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 IRX5P78411 483 aaPredicted RBP16.12■□□□□ 0.17
GPC3-202ENST00000394299 LAMC2Q13753 1193 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 PRAMEF19Q5SWL8 479 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 SCARA5Q6ZMJ2 495 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 TSHZ1Q6ZSZ6 1077 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 C11orf70Q9BRQ4 267 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 DPH5Q9H2P9 285 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 RRAGCQ9HB90 399 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 GBA2Q9HCG7 927 aaPredicted RBP16.12■□□□□ 0.17
GPC3-202ENST00000394299 ANAPC7Q9UJX3 599 aa16.12■□□□□ 0.17
GPC3-202ENST00000394299 GOLGA6BA6NDN3 693 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 MEFVO15553 781 aaPredicted RBP16.11■□□□□ 0.17
GPC3-202ENST00000394299 DAPK3O43293 454 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 THAP12O43422 761 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 RNF40O75150 1001 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 MTA2O94776 668 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 GH1P01241 217 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 SMPD1P17405 629 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 PROZP22891 400 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 FLT3P36888 993 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 AARSP49588 968 aaKnown RBP eCLIP16.11■□□□□ 0.17
GPC3-202ENST00000394299 POU5F1Q01860 360 aaKnown RBP16.11■□□□□ 0.17
GPC3-202ENST00000394299 HLTFQ14527 1009 aaKnown RBP eCLIP16.11■□□□□ 0.173e-11■□□□□ 10.6
GPC3-202ENST00000394299 EMBQ6PCB8 327 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 MPZL3Q6UWV2 235 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 C16orf70Q9BSU1 422 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 CDT1Q9H211 546 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 TTC7AQ9ULT0 858 aaPredicted RBP16.11■□□□□ 0.17
GPC3-202ENST00000394299 MROH7Q68CQ1 1323 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 GAS2O43903 313 aaKnown RBP16.11■□□□□ 0.17
GPC3-202ENST00000394299 ASS1P00966 412 aaKnown RBP16.11■□□□□ 0.17
GPC3-202ENST00000394299 CYP1A1P04798 512 aaPredicted RBP16.11■□□□□ 0.17
GPC3-202ENST00000394299 SLC26A2P50443 739 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 WDR49Q8IV35 697 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 NPLOC4Q8TAT6 608 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 RUBCNQ92622 972 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 CAVIN3Q969G5 261 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 RPS6KC1Q96S38 1066 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 C2orf40Q9H1Z8 148 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 AKT3Q9Y243 479 aa16.11■□□□□ 0.17
GPC3-202ENST00000394299 CCDC188H7C350 402 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms