RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 APOL6Q9BWW8 343 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 NOP53Q9NZM5 478 aaKnown RBP11.2□□□□□ -0.62
CALD1-203ENST00000393118 PCSK1NQ9UHG2 260 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 GTF3C4Q9UKN8 822 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 ABCA3Q99758 1704 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 AGPSO00116 658 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 WEE2P0C1S8 567 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 PYGMP11217 842 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 POLR2BP30876 1174 aaKnown RBP11.19□□□□□ -0.62
CALD1-203ENST00000393118 ZBTB16Q05516 673 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 HHATQ5VTY9 493 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.19□□□□□ -0.62
CALD1-203ENST00000393118 SRRM1Q8IYB3 904 aaKnown RBP11.19□□□□□ -0.62
CALD1-203ENST00000393118 RBBP8NLQ8NC74 664 aaPredicted RBP11.19□□□□□ -0.62
CALD1-203ENST00000393118 PSPC1Q8WXF1 523 aaKnown RBP11.19□□□□□ -0.62
CALD1-203ENST00000393118 CYFIP2Q96F07 1278 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 ZBTB45Q96K62 511 aaPredicted RBP11.19□□□□□ -0.62
CALD1-203ENST00000393118 RIPK3Q9Y572 518 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 PCDHB2Q9Y5E7 798 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 PFDN1O60925 122 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 RNF8O76064 485 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 SNUPNO95149 360 aaKnown RBP11.19□□□□□ -0.62
CALD1-203ENST00000393118 YARSP54577 528 aaKnown RBP11.19□□□□□ -0.62
CALD1-203ENST00000393118 NOP14P78316 857 aaKnown RBP11.19□□□□□ -0.62
CALD1-203ENST00000393118 HADHQ16836 314 aaKnown RBP11.19□□□□□ -0.62
CALD1-203ENST00000393118 CDO1Q16878 200 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 ZNF699Q32M78 642 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 NUGGCQ68CJ6 796 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 CTAGE3PQ8IX95 158 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 EPS8L1Q8TE68 723 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 FAM81BQ96LP2 452 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 CNOT10Q9H9A5 744 aaKnown RBP11.19□□□□□ -0.62
CALD1-203ENST00000393118 ETAA1Q9NY74 926 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.19□□□□□ -0.62
CALD1-203ENST00000393118 ASTN2O75129 1339 aaPredicted RBP11.19□□□□□ -0.62
CALD1-203ENST00000393118 MAN1A1P33908 653 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 CCNHP51946 323 aaPredicted RBP11.19□□□□□ -0.62
CALD1-203ENST00000393118 NBPF20Q3BBV1 942 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 ALG3Q92685 438 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 HVCN1Q96D96 273 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 SAYSD1Q9NPB0 183 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 GGT7Q9UJ14 662 aa11.19□□□□□ -0.62
CALD1-203ENST00000393118 hCG_2014768A0A024R1R8 64 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 PIK3R2O00459 728 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 CNTN2Q02246 1040 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 CYP24A1Q07973 514 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 KYNUQ16719 465 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 TSNAXIP1Q2TAA8 658 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 DAB2IPQ5VWQ8 1189 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 ENOSF1Q7L5Y1 443 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 PALM2Q8IXS6 379 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 TMEM35BQ8NCS4 154 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.18□□□□□ -0.622e-6■■□□□ 12.4
CALD1-203ENST00000393118 ARHGEF2Q92974 986 aaKnown RBP11.18□□□□□ -0.62
CALD1-203ENST00000393118 GPRASP2Q96D09 838 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 SIX2Q9NPC8 291 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 NR2E1Q9Y466 385 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 SCINQ9Y6U3 715 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 EXOC1LA0A1B0GW35 172 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 ATP2A2P16615 1042 aaKnown RBP11.18□□□□□ -0.62
CALD1-203ENST00000393118 PSMA2P25787 234 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 FLT3P36888 993 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 COILP38432 576 aaPredicted RBP11.18□□□□□ -0.62
CALD1-203ENST00000393118 RASIP1Q5U651 963 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 ACAD10Q6JQN1 1059 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 PPP1R21Q6ZMI0 780 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 SESTD1Q86VW0 696 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 VSIG1Q86XK7 387 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 RFX6Q8HWS3 928 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 APOBEC3FQ8IUX4 373 aaKnown RBP11.18□□□□□ -0.62
CALD1-203ENST00000393118 CCDC60Q8IWA6 550 aaPredicted RBP11.18□□□□□ -0.62
CALD1-203ENST00000393118 RHOT1Q8IXI2 618 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 VCXQ9H320 206 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 SEMA4AQ9H3S1 761 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 UBIAD1Q9Y5Z9 338 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 PEX10O60683 326 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 LUC7L3O95232 432 aaKnown RBP11.18□□□□□ -0.62
CALD1-203ENST00000393118 CCNE2O96020 404 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 RALAP11233 206 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 HSPA9P38646 679 aaKnown RBP11.18□□□□□ -0.62
CALD1-203ENST00000393118 PTENP60484 403 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 PTGISQ16647 500 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 DAW1Q8N136 415 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 ELP3Q9H9T3 547 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 TMBIM4Q9HC24 238 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.18□□□□□ -0.62
CALD1-203ENST00000393118 MYH1P12882 1939 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 GJB6O95452 261 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 CHN1P15882 459 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 YWHAEP62258 255 aaKnown RBP11.18□□□□□ -0.62
CALD1-203ENST00000393118 BASP1P80723 227 aaKnown RBP11.18□□□□□ -0.62
CALD1-203ENST00000393118 SETDB1Q15047 1291 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 BSPRYQ5W0U4 402 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 LRIG3Q6UXM1 1119 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 ANO5Q75V66 913 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 PPP1R14CQ8TAE6 165 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 HSPH1Q92598 858 aa11.18□□□□□ -0.62
CALD1-203ENST00000393118 RPF1Q9H9Y2 349 aaKnown RBP11.18□□□□□ -0.62
CALD1-203ENST00000393118 EXTL3O43909 919 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 EGFRP00533 1210 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms