RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 ZBTB8OSQ8IWT0 167 aa27.38■■□□□ 1.97
SMARCD3-203ENST00000392811 ZDHHC14Q8IZN3 488 aa27.38■■□□□ 1.97
SMARCD3-203ENST00000392811 PRELID2Q8N945 189 aa27.38■■□□□ 1.97
SMARCD3-203ENST00000392811 L3MBTL3Q96JM7 780 aaPredicted RBP27.38■■□□□ 1.97
SMARCD3-203ENST00000392811 RAB17Q9H0T7 212 aa27.38■■□□□ 1.97
SMARCD3-203ENST00000392811 ANAPC7Q9UJX3 599 aa27.38■■□□□ 1.97
SMARCD3-203ENST00000392811 PHF2O75151 1096 aa27.37■■□□□ 1.97
SMARCD3-203ENST00000392811 TBXAS1P24557 533 aaPredicted RBP27.37■■□□□ 1.97
SMARCD3-203ENST00000392811 ACTN2P35609 894 aa27.37■■□□□ 1.97
SMARCD3-203ENST00000392811 GJA5P36382 358 aa27.37■■□□□ 1.97
SMARCD3-203ENST00000392811 CENPCQ03188 943 aa27.37■■□□□ 1.97
SMARCD3-203ENST00000392811 CD302Q8IX05 232 aa27.37■■□□□ 1.97
SMARCD3-203ENST00000392811 TRAPPC12Q8WVT3 735 aa27.37■■□□□ 1.97
SMARCD3-203ENST00000392811 CYFIP2Q96F07 1278 aa27.37■■□□□ 1.97
SMARCD3-203ENST00000392811 CFHP08603 1231 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 MYBL1P10243 752 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 TXNP10599 105 aaKnown RBP27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 RRM1P23921 792 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 MAPK4P31152 587 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 FLT3P36888 993 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 DHX34Q14147 1143 aaKnown RBP27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 MAPK6Q16659 721 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 DPY19L2Q6NUT2 758 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 ARMC9Q7Z3E5 817 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 EXOC8Q8IYI6 725 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 LRRC45Q96CN5 670 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 TRIM31Q9BZY9 425 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 PDGFCQ9NRA1 345 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 CNTN6Q9UQ52 1028 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 MROH7Q68CQ1 1323 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 FAM187AA6NFU0 413 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 HSD17B3P37058 310 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 NSFP46459 744 aaKnown RBP27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 PHLDB2Q86SQ0 1253 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 WDR49Q8IV35 697 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 RBBP8NLQ8NC74 664 aaPredicted RBP27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 C18orf8Q96DM3 657 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 TRIM11Q96F44 468 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 TRIM7Q9C029 511 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 PLAAQ9Y263 795 aa27.36■■□□□ 1.97
SMARCD3-203ENST00000392811 ABLIM1O14639 778 aa27.35■■□□□ 1.97
SMARCD3-203ENST00000392811 GNA15P30679 374 aa27.35■■□□□ 1.97
SMARCD3-203ENST00000392811 RWDD2BP57060 319 aa27.35■■□□□ 1.97
SMARCD3-203ENST00000392811 GRM1Q13255 1194 aa27.35■■□□□ 1.97
SMARCD3-203ENST00000392811 C2CD6Q53TS8 623 aa27.35■■□□□ 1.97
SMARCD3-203ENST00000392811 DUPD1Q68J44 220 aa27.35■■□□□ 1.97
SMARCD3-203ENST00000392811 MON1BQ7L1V2 547 aa27.35■■□□□ 1.97
SMARCD3-203ENST00000392811 JAMLQ86YT9 394 aa27.35■■□□□ 1.97
SMARCD3-203ENST00000392811 RHPN2Q8IUC4 686 aa27.35■■□□□ 1.97
SMARCD3-203ENST00000392811 ERP44Q9BS26 406 aa27.35■■□□□ 1.97
SMARCD3-203ENST00000392811 C2orf40Q9H1Z8 148 aa27.35■■□□□ 1.97
SMARCD3-203ENST00000392811 TCRBV7S2A1N4TA0A589 114 aa27.34■■□□□ 1.97
SMARCD3-203ENST00000392811 OGTO15294 1046 aa27.34■■□□□ 1.97
SMARCD3-203ENST00000392811 CHRNA3P32297 505 aa27.34■■□□□ 1.97
SMARCD3-203ENST00000392811 AP3M2P53677 418 aa27.34■■□□□ 1.97
SMARCD3-203ENST00000392811 MCL1Q07820 350 aa27.34■■□□□ 1.97
SMARCD3-203ENST00000392811 UAP1Q16222 522 aaPredicted RBP27.34■■□□□ 1.97
SMARCD3-203ENST00000392811 LLGL2Q6P1M3 1020 aa27.34■■□□□ 1.97
SMARCD3-203ENST00000392811 SLC13A5Q86YT5 568 aaPredicted RBP27.34■■□□□ 1.97
SMARCD3-203ENST00000392811 PASD1Q8IV76 773 aa27.34■■□□□ 1.97
SMARCD3-203ENST00000392811 ABRAQ8N0Z2 381 aa27.34■■□□□ 1.97
SMARCD3-203ENST00000392811 SYT17Q9BSW7 474 aa27.34■■□□□ 1.97
SMARCD3-203ENST00000392811 SMARCAD1Q9H4L7 1026 aa27.34■■□□□ 1.97
SMARCD3-203ENST00000392811 CST3P01034 146 aaPredicted RBP27.34■■□□□ 1.97
SMARCD3-203ENST00000392811 GJB1P08034 283 aa27.34■■□□□ 1.97
SMARCD3-203ENST00000392811 PTGIRP43119 386 aa27.34■■□□□ 1.97
SMARCD3-203ENST00000392811 HNRNPH2P55795 449 aaKnown RBP27.34■■□□□ 1.97
SMARCD3-203ENST00000392811 ZSCAN26Q16670 478 aa27.34■■□□□ 1.97
SMARCD3-203ENST00000392811 TRIM72Q6ZMU5 477 aa27.34■■□□□ 1.97
SMARCD3-203ENST00000392811 LEKR1Q6ZMV7 388 aa27.34■■□□□ 1.97
SMARCD3-203ENST00000392811 MAGOHBQ96A72 148 aaKnown RBP27.34■■□□□ 1.97
SMARCD3-203ENST00000392811 EFCC1Q9HA90 598 aa27.34■■□□□ 1.97
SMARCD3-203ENST00000392811 CYP2C8P10632 490 aa27.33■■□□□ 1.97
SMARCD3-203ENST00000392811 SSTR3P32745 418 aaPredicted RBP27.33■■□□□ 1.97
SMARCD3-203ENST00000392811 SLC26A2P50443 739 aa27.33■■□□□ 1.97
SMARCD3-203ENST00000392811 TTC27Q6P3X3 843 aa27.33■■□□□ 1.97
SMARCD3-203ENST00000392811 FAM212AQ96EL1 285 aa27.33■■□□□ 1.97
SMARCD3-203ENST00000392811 ZNF668Q96K58 619 aaPredicted RBP27.33■■□□□ 1.97
SMARCD3-203ENST00000392811 IMPG2Q9BZV3 1241 aa27.33■■□□□ 1.97
SMARCD3-203ENST00000392811 MTMR12Q9C0I1 747 aa27.33■■□□□ 1.97
SMARCD3-203ENST00000392811 CPSF3Q9UKF6 684 aaKnown RBP27.33■■□□□ 1.97
SMARCD3-203ENST00000392811 ASS1P00966 412 aaKnown RBP27.33■■□□□ 1.96
SMARCD3-203ENST00000392811 NOMO3P69849 1222 aa27.33■■□□□ 1.96
SMARCD3-203ENST00000392811 SNAPC2Q13487 334 aa27.33■■□□□ 1.96
SMARCD3-203ENST00000392811 TTLL4Q14679 1199 aa27.33■■□□□ 1.96
SMARCD3-203ENST00000392811 SHCBP1Q8NEM2 672 aa27.33■■□□□ 1.96
SMARCD3-203ENST00000392811 ZBTB10Q96DT7 871 aa27.33■■□□□ 1.96
SMARCD3-203ENST00000392811 JPH2Q9BR39 696 aaPredicted RBP27.33■■□□□ 1.96
SMARCD3-203ENST00000392811 PCYOX1Q9UHG3 505 aa27.33■■□□□ 1.96
SMARCD3-203ENST00000392811 LDLRAD1Q5T700 205 aa27.32■■□□□ 1.96
SMARCD3-203ENST00000392811 TMC3Q7Z5M5 1100 aa27.32■■□□□ 1.96
SMARCD3-203ENST00000392811 UBR7Q8N806 425 aa27.32■■□□□ 1.96
SMARCD3-203ENST00000392811 NLRP4Q96MN2 994 aa27.32■■□□□ 1.96
SMARCD3-203ENST00000392811 THAP12O43422 761 aa27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 HBP1O60381 514 aa27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 SIX1Q15475 284 aaPredicted RBP27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 KCTD16Q68DU8 428 aa27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 LRIG3Q6UXM1 1119 aa27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 SH2D3CQ8N5H7 860 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms