RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 TBC1D7Q9P0N9 293 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 CACNG4Q9UBN1 327 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 HPSEQ9Y251 543 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 REV3LO60673 3130 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 TRIP11Q15643 1979 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 ANKRD63C9JTQ0 380 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 SYN3O14994 580 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 MEFVO15553 781 aaPredicted RBP13.78□□□□□ -0.2
GGPS1-203ENST00000391855 MYBP10242 640 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 PFKFB1P16118 471 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 EPCAMP16422 314 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 FGFR3P22607 806 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 LRPAP1P30533 357 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 TNFSF9P41273 254 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 MTHFRP42898 656 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 CBX2Q14781 532 aaPredicted RBP13.78□□□□□ -0.2
GGPS1-203ENST00000391855 ENOX2Q16206 610 aaKnown RBP13.78□□□□□ -0.2
GGPS1-203ENST00000391855 PSMD5Q16401 504 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 RTP2Q5QGT7 225 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 CYP26C1Q6V0L0 522 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 NT5DC4Q86YG4 428 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 BEST2Q8NFU1 509 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 RABGGTAQ92696 567 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 KIF12Q96FN5 646 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 CCDC34Q96HJ3 373 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 RIPOR3Q96MK2 946 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 NECAB3Q96P71 396 aaPredicted RBP13.78□□□□□ -0.2
GGPS1-203ENST00000391855 PHF7Q9BWX1 381 aaPredicted RBP13.78□□□□□ -0.2
GGPS1-203ENST00000391855 S1PR5Q9H228 398 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 ADAM7Q9H2U9 754 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 GOLGA2P5Q9HBQ8 144 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 C2CD2Q9Y426 696 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 NUB1Q9Y5A7 615 aa13.78□□□□□ -0.2
GGPS1-203ENST00000391855 C19orf67A6NJJ6 358 aa13.77□□□□□ -0.21
GGPS1-203ENST00000391855 IL18RAPO95256 599 aa13.77□□□□□ -0.21
GGPS1-203ENST00000391855 SSTR3P32745 418 aaPredicted RBP13.77□□□□□ -0.21
GGPS1-203ENST00000391855 CASP5P51878 434 aa13.77□□□□□ -0.21
GGPS1-203ENST00000391855 ZBTB6Q15916 424 aa13.77□□□□□ -0.21
GGPS1-203ENST00000391855 ANKS3Q6ZW76 656 aa13.77□□□□□ -0.21
GGPS1-203ENST00000391855 CMASQ8NFW8 434 aaPredicted RBP13.77□□□□□ -0.21
GGPS1-203ENST00000391855 RHOBTB2Q9BYZ6 727 aa13.77□□□□□ -0.21
GGPS1-203ENST00000391855 PLEKHA4Q9H4M7 779 aa13.77□□□□□ -0.21
GGPS1-203ENST00000391855 MTRRQ9UBK8 725 aa13.77□□□□□ -0.21
GGPS1-203ENST00000391855 TUBGCP4Q9UGJ1 667 aa13.77□□□□□ -0.21
GGPS1-203ENST00000391855 SERTAD1Q9UHV2 236 aa13.77□□□□□ -0.21
GGPS1-203ENST00000391855 BACE2Q9Y5Z0 518 aa13.77□□□□□ -0.21
GGPS1-203ENST00000391855 A0A1B0GVL5 298 aa13.76□□□□□ -0.21
GGPS1-203ENST00000391855 LACTBL1A8MY62 500 aa13.76□□□□□ -0.21
GGPS1-203ENST00000391855 ACTN4O43707 911 aaKnown RBP13.76□□□□□ -0.21
GGPS1-203ENST00000391855 PRPF6O94906 941 aaKnown RBP13.76□□□□□ -0.21
GGPS1-203ENST00000391855 ADSSP30520 456 aa13.76□□□□□ -0.21
GGPS1-203ENST00000391855 SYKP43405 635 aa13.76□□□□□ -0.21
GGPS1-203ENST00000391855 AFMP43652 599 aa13.76□□□□□ -0.21
GGPS1-203ENST00000391855 SNRPFP62306 86 aaKnown RBP13.76□□□□□ -0.21
GGPS1-203ENST00000391855 EHHADHQ08426 723 aa13.76□□□□□ -0.21
GGPS1-203ENST00000391855 ZBTB41Q5SVQ8 909 aa13.76□□□□□ -0.21
GGPS1-203ENST00000391855 SPATA1Q5VX52 437 aa13.76□□□□□ -0.21
GGPS1-203ENST00000391855 CD300LGQ6UXG3 332 aa13.76□□□□□ -0.21
GGPS1-203ENST00000391855 C15orf39Q6ZRI6 1047 aa13.76□□□□□ -0.21
GGPS1-203ENST00000391855 CEP57Q86XR8 500 aa13.76□□□□□ -0.21
GGPS1-203ENST00000391855 BRSK2Q8IWQ3 736 aa13.76□□□□□ -0.21
GGPS1-203ENST00000391855 C3orf58Q8NDZ4 430 aa13.76□□□□□ -0.21
GGPS1-203ENST00000391855 LNX1Q8TBB1 728 aaPredicted RBP13.76□□□□□ -0.21
GGPS1-203ENST00000391855 C18orf25Q96B23 403 aaPredicted RBP13.76□□□□□ -0.21
GGPS1-203ENST00000391855 B3GALT6Q96L58 329 aa13.76□□□□□ -0.21
GGPS1-203ENST00000391855 MAN1C1Q9NR34 630 aa13.76□□□□□ -0.21
GGPS1-203ENST00000391855 CIZ1Q9ULV3 898 aaPredicted RBP13.76□□□□□ -0.21
GGPS1-203ENST00000391855 ARHGEF37A1IGU5 675 aa13.75□□□□□ -0.21
GGPS1-203ENST00000391855 TISP43B9A030 160 aa13.75□□□□□ -0.21
GGPS1-203ENST00000391855 H7C4K7 107 aa13.75□□□□□ -0.21
GGPS1-203ENST00000391855 MCM4P33991 863 aa13.75□□□□□ -0.21
GGPS1-203ENST00000391855 BRCC3P46736 316 aa13.75□□□□□ -0.21
GGPS1-203ENST00000391855 ACOT2P49753 483 aa13.75□□□□□ -0.21
GGPS1-203ENST00000391855 KCNA1Q09470 495 aa13.75□□□□□ -0.21
GGPS1-203ENST00000391855 TMEM132DQ14C87 1099 aa13.75□□□□□ -0.21
GGPS1-203ENST00000391855 ATAT1Q5SQI0 421 aa13.75□□□□□ -0.21
GGPS1-203ENST00000391855 RARS2Q5T160 578 aaKnown RBP13.75□□□□□ -0.21
GGPS1-203ENST00000391855 ARMCX5Q6P1M9 558 aa13.75□□□□□ -0.21
GGPS1-203ENST00000391855 PRSS55Q6UWB4 352 aaPredicted RBP13.75□□□□□ -0.21
GGPS1-203ENST00000391855 EPM2AIP1Q7L775 607 aaPredicted RBP13.75□□□□□ -0.21
GGPS1-203ENST00000391855 FSIP1Q8NA03 581 aa13.75□□□□□ -0.21
GGPS1-203ENST00000391855 APPL2Q8NEU8 664 aa13.75□□□□□ -0.21
GGPS1-203ENST00000391855 ZNF507Q8TCN5 953 aa13.75□□□□□ -0.21
GGPS1-203ENST00000391855 CCDC47Q96A33 483 aaKnown RBP13.75□□□□□ -0.21
GGPS1-203ENST00000391855 FAM212AQ96EL1 285 aa13.75□□□□□ -0.21
GGPS1-203ENST00000391855 SUSD3Q96L08 255 aa13.75□□□□□ -0.21
GGPS1-203ENST00000391855 FGFBP2Q9BYJ0 223 aa13.75□□□□□ -0.21
GGPS1-203ENST00000391855 ZDHHC7Q9NXF8 308 aa13.75□□□□□ -0.21
GGPS1-203ENST00000391855 CGNQ9P2M7 1197 aaKnown RBP13.75□□□□□ -0.21
GGPS1-203ENST00000391855 EXTL3O43909 919 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 PAPLNO95428 1278 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 TKTP29401 623 aaKnown RBP13.74□□□□□ -0.21
GGPS1-203ENST00000391855 SPAG1Q07617 926 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 PSMD2Q13200 908 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 CUL4BQ13620 913 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 SURF1Q15526 300 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 BMT2Q1RMZ1 405 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 LIN9Q5TKA1 542 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 JADE1Q6IE81 842 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 LILRA6Q6PI73 481 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms