RNA–Protein interactions for RNA: ENST00000390606.3

IGHV3-20-201, Transcript of immunoglobulin heavy variable 3-20, humanhuman

APPRIS P1 BASIC

Gene IGHV3-20, Length 415 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-20-201ENST00000390606 CHMP5Q9NZZ3 219 aa23.95■■□□□ 1.42
IGHV3-20-201ENST00000390606 UBQLN1Q9UMX0 589 aaKnown RBP23.95■■□□□ 1.42
IGHV3-20-201ENST00000390606 A0A0C4DFX4 3053 aa23.95■■□□□ 1.42
IGHV3-20-201ENST00000390606 TCF20Q9UGU0 1960 aaKnown RBP23.94■■□□□ 1.42
IGHV3-20-201ENST00000390606 UBE4BO95155 1302 aa23.94■■□□□ 1.42
IGHV3-20-201ENST00000390606 TEX28O15482 410 aa23.94■■□□□ 1.42
IGHV3-20-201ENST00000390606 TGFB1I1O43294 461 aa23.94■■□□□ 1.42
IGHV3-20-201ENST00000390606 MBTPS2O43462 519 aa23.94■■□□□ 1.42
IGHV3-20-201ENST00000390606 IL9P15248 144 aa23.94■■□□□ 1.42
IGHV3-20-201ENST00000390606 LRPAP1P30533 357 aa23.94■■□□□ 1.42
IGHV3-20-201ENST00000390606 BRCC3P46736 316 aa23.94■■□□□ 1.42
IGHV3-20-201ENST00000390606 JADE1Q6IE81 842 aa23.94■■□□□ 1.42
IGHV3-20-201ENST00000390606 ANKRD54Q6NXT1 300 aa23.94■■□□□ 1.42
IGHV3-20-201ENST00000390606 SYCE2Q6PIF2 218 aa23.94■■□□□ 1.42
IGHV3-20-201ENST00000390606 FMR1NBQ8N0W7 255 aaPredicted RBP23.94■■□□□ 1.42
IGHV3-20-201ENST00000390606 TMEM87AQ8NBN3 555 aa23.94■■□□□ 1.42
IGHV3-20-201ENST00000390606 ADAMTS19Q8TE59 1207 aa23.94■■□□□ 1.42
IGHV3-20-201ENST00000390606 RIN2Q8WYP3 895 aaPredicted RBP23.94■■□□□ 1.42
IGHV3-20-201ENST00000390606 CASP10Q92851 521 aa23.94■■□□□ 1.42
IGHV3-20-201ENST00000390606 FAM212AQ96EL1 285 aa23.94■■□□□ 1.42
IGHV3-20-201ENST00000390606 SAAL1Q96ER3 474 aa23.94■■□□□ 1.42
IGHV3-20-201ENST00000390606 TTPALQ9BTX7 342 aa23.94■■□□□ 1.42
IGHV3-20-201ENST00000390606 ASB7Q9H672 318 aa23.94■■□□□ 1.42
IGHV3-20-201ENST00000390606 NFICP08651 508 aa23.93■■□□□ 1.42
IGHV3-20-201ENST00000390606 EPCAMP16422 314 aa23.93■■□□□ 1.42
IGHV3-20-201ENST00000390606 FGFR3P22607 806 aa23.93■■□□□ 1.42
IGHV3-20-201ENST00000390606 KLRC2P26717 231 aa23.93■■□□□ 1.42
IGHV3-20-201ENST00000390606 GUCY2FP51841 1108 aa23.93■■□□□ 1.42
IGHV3-20-201ENST00000390606 DPYDQ12882 1025 aa23.93■■□□□ 1.42
IGHV3-20-201ENST00000390606 STK4Q13043 487 aa23.93■■□□□ 1.42
IGHV3-20-201ENST00000390606 SMAD4Q13485 552 aaKnown RBP23.93■■□□□ 1.42
IGHV3-20-201ENST00000390606 SPATA1Q5VX52 437 aa23.93■■□□□ 1.42
IGHV3-20-201ENST00000390606 ARMCX5Q6P1M9 558 aa23.93■■□□□ 1.42
IGHV3-20-201ENST00000390606 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.93■■□□□ 1.42
IGHV3-20-201ENST00000390606 PPFIBP1Q86W92 1011 aa23.93■■□□□ 1.42
IGHV3-20-201ENST00000390606 KIAA0895Q8NCT3 520 aa23.93■■□□□ 1.42
IGHV3-20-201ENST00000390606 ENGASEQ8NFI3 743 aa23.93■■□□□ 1.42
IGHV3-20-201ENST00000390606 PIK3R5Q8WYR1 880 aa23.93■■□□□ 1.42
IGHV3-20-201ENST00000390606 FAM213AQ9BRX8 229 aa23.93■■□□□ 1.42
IGHV3-20-201ENST00000390606 PCIF1Q9H4Z3 704 aa23.93■■□□□ 1.42
IGHV3-20-201ENST00000390606 EXOC1Q9NV70 894 aa23.93■■□□□ 1.42
IGHV3-20-201ENST00000390606 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.93■■□□□ 1.42
IGHV3-20-201ENST00000390606 GOLGA6L4A6NEF3 574 aa23.92■■□□□ 1.42
IGHV3-20-201ENST00000390606 LDHAP00338 332 aaKnown RBP23.92■■□□□ 1.42
IGHV3-20-201ENST00000390606 SRGAP2BP0DMP2 458 aa23.92■■□□□ 1.42
IGHV3-20-201ENST00000390606 CLCN4P51793 760 aa23.92■■□□□ 1.42
IGHV3-20-201ENST00000390606 WNT7BP56706 349 aa23.92■■□□□ 1.42
IGHV3-20-201ENST00000390606 SNW1Q13573 536 aaKnown RBP23.92■■□□□ 1.42
IGHV3-20-201ENST00000390606 PRSS55Q6UWB4 352 aaPredicted RBP23.92■■□□□ 1.42
IGHV3-20-201ENST00000390606 CEP57Q86XR8 500 aa23.92■■□□□ 1.42
IGHV3-20-201ENST00000390606 BRSK2Q8IWQ3 736 aa23.92■■□□□ 1.42
IGHV3-20-201ENST00000390606 NELFCDQ8IXH7 590 aa23.92■■□□□ 1.42
IGHV3-20-201ENST00000390606 LNX1Q8TBB1 728 aaPredicted RBP23.92■■□□□ 1.42
IGHV3-20-201ENST00000390606 S1PR5Q9H228 398 aa23.92■■□□□ 1.42
IGHV3-20-201ENST00000390606 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.92■■□□□ 1.42
IGHV3-20-201ENST00000390606 FNIP2Q9P278 1114 aa23.92■■□□□ 1.42
IGHV3-20-201ENST00000390606 DERAQ9Y315 318 aa23.92■■□□□ 1.42
IGHV3-20-201ENST00000390606 VWA8A3KMH1 1905 aa23.92■■□□□ 1.42
IGHV3-20-201ENST00000390606 ANK1P16157 1881 aa23.92■■□□□ 1.42
IGHV3-20-201ENST00000390606 GOLGA8IPA6NC78 632 aa23.91■■□□□ 1.42
IGHV3-20-201ENST00000390606 GOLGA8JA6NMD2 632 aa23.91■■□□□ 1.42
IGHV3-20-201ENST00000390606 I3L4J1 428 aa23.91■■□□□ 1.42
IGHV3-20-201ENST00000390606 KIAA0391O15091 583 aaKnown RBP23.91■■□□□ 1.42
IGHV3-20-201ENST00000390606 XPOTO43592 962 aaKnown RBP23.91■■□□□ 1.42
IGHV3-20-201ENST00000390606 EXTL3O43909 919 aa23.91■■□□□ 1.42
IGHV3-20-201ENST00000390606 RPN1P04843 607 aaKnown RBP23.91■■□□□ 1.42
IGHV3-20-201ENST00000390606 ADH1AP07327 375 aa23.91■■□□□ 1.42
IGHV3-20-201ENST00000390606 PSMD2Q13200 908 aa23.91■■□□□ 1.42
IGHV3-20-201ENST00000390606 NECAB3Q96P71 396 aaPredicted RBP23.91■■□□□ 1.42
IGHV3-20-201ENST00000390606 AGPAT3Q9NRZ7 376 aa23.91■■□□□ 1.42
IGHV3-20-201ENST00000390606 C2CD2Q9Y426 696 aa23.91■■□□□ 1.42
IGHV3-20-201ENST00000390606 VCANP13611 3396 aa23.9■■□□□ 1.42
IGHV3-20-201ENST00000390606 TRAPPC3O43617 180 aa23.9■■□□□ 1.42
IGHV3-20-201ENST00000390606 IL18RAPO95256 599 aa23.9■■□□□ 1.42
IGHV3-20-201ENST00000390606 HOXB8P17481 243 aaPredicted RBP23.9■■□□□ 1.42
IGHV3-20-201ENST00000390606 RPL17P18621 184 aaKnown RBP23.9■■□□□ 1.42
IGHV3-20-201ENST00000390606 TKTP29401 623 aaKnown RBP23.9■■□□□ 1.42
IGHV3-20-201ENST00000390606 TMEM132DQ14C87 1099 aa23.9■■□□□ 1.42
IGHV3-20-201ENST00000390606 SMAD2Q15796 467 aaKnown RBP23.9■■□□□ 1.42
IGHV3-20-201ENST00000390606 EFCAB13Q8IY85 973 aa23.9■■□□□ 1.42
IGHV3-20-201ENST00000390606 GPD1LQ8N335 351 aa23.9■■□□□ 1.42
IGHV3-20-201ENST00000390606 UHRF1Q96T88 793 aaPredicted RBP23.9■■□□□ 1.42
IGHV3-20-201ENST00000390606 TTC28Q96AY4 2481 aa23.89■■□□□ 1.42
IGHV3-20-201ENST00000390606 RHOBTB3O94955 611 aa23.89■■□□□ 1.41
IGHV3-20-201ENST00000390606 SNRPFP62306 86 aaKnown RBP23.89■■□□□ 1.41
IGHV3-20-201ENST00000390606 FAM160A1Q05DH4 1040 aa23.89■■□□□ 1.41
IGHV3-20-201ENST00000390606 PSMD5Q16401 504 aa23.89■■□□□ 1.41
IGHV3-20-201ENST00000390606 KNOP1Q1ED39 458 aaKnown RBP23.89■■□□□ 1.41
IGHV3-20-201ENST00000390606 KANK3Q6NY19 840 aa23.89■■□□□ 1.41
IGHV3-20-201ENST00000390606 BEST2Q8NFU1 509 aa23.89■■□□□ 1.41
IGHV3-20-201ENST00000390606 SUSD6Q92537 303 aa23.89■■□□□ 1.41
IGHV3-20-201ENST00000390606 SUSD3Q96L08 255 aa23.89■■□□□ 1.41
IGHV3-20-201ENST00000390606 FBXL18Q96ME1 805 aa23.89■■□□□ 1.41
IGHV3-20-201ENST00000390606 CLSTN3Q9BQT9 956 aa23.89■■□□□ 1.41
IGHV3-20-201ENST00000390606 HSPBP1Q9NZL4 362 aa23.89■■□□□ 1.41
IGHV3-20-201ENST00000390606 USP15Q9Y4E8 981 aaPredicted RBP23.89■■□□□ 1.41
IGHV3-20-201ENST00000390606 NUB1Q9Y5A7 615 aa23.89■■□□□ 1.41
IGHV3-20-201ENST00000390606 DLL1O00548 723 aa23.88■■□□□ 1.41
IGHV3-20-201ENST00000390606 PPEF2O14830 753 aa23.88■■□□□ 1.41
IGHV3-20-201ENST00000390606 AARSP49588 968 aaKnown RBP eCLIP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms