RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 MGST3O14880 152 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 TEX33O43247 280 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 CLSTN1O94985 981 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 ESRRBO95718 433 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 GPANK1O95872 356 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 MT-CO1P00395 513 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 FCER1AP12319 257 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 C5AR1P21730 350 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 FBLP22087 321 aaKnown RBP4.59□□□□□ -1.67
TRAV40-201ENST00000390467 BLOC1S1P78537 153 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 MXRA7P84157 204 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 MPP3Q13368 585 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 CLUL1Q15846 466 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 CYP2A13Q16696 494 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 PRR16Q569H4 304 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 ARMC6Q6NXE6 501 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 RHOT1Q8IXI2 618 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 AMOTL1Q8IY63 956 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 C1orf162Q8NEQ5 155 aaPredicted RBP4.59□□□□□ -1.67
TRAV40-201ENST00000390467 JADE3Q92613 823 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 CYFIP2Q96F07 1278 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 MARS2Q96GW9 593 aaKnown RBP4.59□□□□□ -1.67
TRAV40-201ENST00000390467 REXO4Q9GZR2 422 aaKnown RBP4.59□□□□□ -1.67
TRAV40-201ENST00000390467 GSTO2Q9H4Y5 243 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 MANSC1Q9H8J5 431 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 GALNT9Q9HCQ5 603 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 TMEM74BQ9NUR3 256 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 SLC5A4Q9NY91 659 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 TESQ9UGI8 421 aaKnown RBP4.59□□□□□ -1.67
TRAV40-201ENST00000390467 MCM8Q9UJA3 840 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 NOX1Q9Y5S8 564 aa4.59□□□□□ -1.67
TRAV40-201ENST00000390467 KIAA0391O15091 583 aaKnown RBP4.58□□□□□ -1.68
TRAV40-201ENST00000390467 PCDHGA12O60330 932 aa4.58□□□□□ -1.68
TRAV40-201ENST00000390467 NDUFS2O75306 463 aa4.58□□□□□ -1.68
TRAV40-201ENST00000390467 WASP42768 502 aa4.58□□□□□ -1.68
TRAV40-201ENST00000390467 GEN1Q17RS7 908 aa4.58□□□□□ -1.68
TRAV40-201ENST00000390467 ABCB5Q2M3G0 1257 aa4.58□□□□□ -1.68
TRAV40-201ENST00000390467 SPDYE7PQ495Y7 208 aa4.58□□□□□ -1.68
TRAV40-201ENST00000390467 NECAB2Q7Z6G3 386 aa4.58□□□□□ -1.68
TRAV40-201ENST00000390467 SIMC1Q8NDZ2 872 aa4.58□□□□□ -1.68
TRAV40-201ENST00000390467 C7orf25Q9BPX7 421 aa4.58□□□□□ -1.68
TRAV40-201ENST00000390467 C11orf54Q9H0W9 315 aaPredicted RBP4.58□□□□□ -1.68
TRAV40-201ENST00000390467 UNKLQ9H9P5 680 aaKnown RBP4.58□□□□□ -1.68
TRAV40-201ENST00000390467 VSX1Q9NZR4 365 aaPredicted RBP4.58□□□□□ -1.68
TRAV40-201ENST00000390467 PCDHGA9Q9Y5G4 932 aaKnown RBP4.58□□□□□ -1.68
TRAV40-201ENST00000390467 PCDHGA8Q9Y5G5 932 aa4.58□□□□□ -1.68
TRAV40-201ENST00000390467 PCDHGA7Q9Y5G6 932 aa4.58□□□□□ -1.68
TRAV40-201ENST00000390467 PCDHGA6Q9Y5G7 932 aa4.58□□□□□ -1.68
TRAV40-201ENST00000390467 PCDHGA3Q9Y5H0 932 aa4.58□□□□□ -1.68
TRAV40-201ENST00000390467 ARHGEF17Q96PE2 2063 aaPredicted RBP4.58□□□□□ -1.68
TRAV40-201ENST00000390467 FZD9O00144 591 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 IGSF3O75054 1194 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 SBK3P0C264 359 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 CKBP12277 381 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 ALAS1P13196 640 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 CXCR5P32302 372 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 CDKN1CP49918 316 aaPredicted RBP4.57□□□□□ -1.68
TRAV40-201ENST00000390467 VAV2P52735 878 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 CTXN1P60606 82 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 C3orf36Q3SXR2 165 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 DACT2Q5SW24 774 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 STRIP1Q5VSL9 837 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 PGM2L1Q6PCE3 622 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 Q6ZNX1 250 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 FITM2Q8N6M3 262 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 Q8NA96 180 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 FAM98AQ8NCA5 519 aaKnown RBP4.57□□□□□ -1.68
TRAV40-201ENST00000390467 TBC1D15Q8TC07 691 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 IFI44Q8TCB0 444 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 VOPP1Q96AW1 172 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 BOD1Q96IK1 185 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 TLR10Q9BXR5 811 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 PUS7LQ9H0K6 701 aaKnown RBP4.57□□□□□ -1.68
TRAV40-201ENST00000390467 ATP8A1Q9Y2Q0 1164 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 PCDHA13Q9Y5I0 950 aa4.57□□□□□ -1.68
TRAV40-201ENST00000390467 COL11A2P13942 1736 aaPredicted RBP4.56□□□□□ -1.68
TRAV40-201ENST00000390467 EDNRBP24530 442 aa4.56□□□□□ -1.68
TRAV40-201ENST00000390467 SIM1P81133 766 aaPredicted RBP4.56□□□□□ -1.68
TRAV40-201ENST00000390467 MTMR1Q13613 665 aa4.56□□□□□ -1.68
TRAV40-201ENST00000390467 ACAP2Q15057 778 aa4.56□□□□□ -1.68
TRAV40-201ENST00000390467 FLYWCH1Q4VC44 716 aa4.56□□□□□ -1.68
TRAV40-201ENST00000390467 ZNF362Q5T0B9 420 aaPredicted RBP4.56□□□□□ -1.68
TRAV40-201ENST00000390467 RD3Q7Z3Z2 195 aa4.56□□□□□ -1.68
TRAV40-201ENST00000390467 FAM43AQ8N2R8 423 aa4.56□□□□□ -1.68
TRAV40-201ENST00000390467 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.56□□□□□ -1.68
TRAV40-201ENST00000390467 NUP133Q8WUM0 1156 aa4.56□□□□□ -1.68
TRAV40-201ENST00000390467 SSH1Q8WYL5 1049 aa4.56□□□□□ -1.68
TRAV40-201ENST00000390467 TMX3Q96JJ7 454 aa4.56□□□□□ -1.68
TRAV40-201ENST00000390467 AIFM2Q9BRQ8 373 aa4.56□□□□□ -1.68
TRAV40-201ENST00000390467 CCDC8Q9H0W5 538 aaPredicted RBP4.56□□□□□ -1.68
TRAV40-201ENST00000390467 SPC25Q9HBM1 224 aa4.56□□□□□ -1.68
TRAV40-201ENST00000390467 PTGFRNQ9P2B2 879 aa4.56□□□□□ -1.68
TRAV40-201ENST00000390467 TRHDEQ9UKU6 1024 aa4.56□□□□□ -1.68
TRAV40-201ENST00000390467 LIMCH1Q9UPQ0 1083 aa4.56□□□□□ -1.68
TRAV40-201ENST00000390467 MTO1Q9Y2Z2 717 aaKnown RBP4.56□□□□□ -1.68
TRAV40-201ENST00000390467 IPPQ9Y573 584 aa4.56□□□□□ -1.68
TRAV40-201ENST00000390467 GRM6O15303 877 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 HAUS5O94927 633 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 IL12RB1P42701 662 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 ZNF280AP59817 542 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms