RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 LARGE1O95461 756 aa17.54■□□□□ 0.4
VCX3A-201ENST00000381089 EDN1P05305 212 aa17.54■□□□□ 0.4
VCX3A-201ENST00000381089 TARSP26639 723 aaKnown RBP17.54■□□□□ 0.4
VCX3A-201ENST00000381089 GRM5P41594 1212 aa17.54■□□□□ 0.4
VCX3A-201ENST00000381089 BRCC3P46736 316 aa17.54■□□□□ 0.4
VCX3A-201ENST00000381089 ZNF174Q15697 407 aa17.54■□□□□ 0.4
VCX3A-201ENST00000381089 ZNF568Q3ZCX4 644 aa17.54■□□□□ 0.4
VCX3A-201ENST00000381089 CYP4A22Q5TCH4 519 aa17.54■□□□□ 0.4
VCX3A-201ENST00000381089 IQCEQ6IPM2 695 aa17.54■□□□□ 0.4
VCX3A-201ENST00000381089 PDZD4Q76G19 769 aaPredicted RBP17.54■□□□□ 0.4
VCX3A-201ENST00000381089 ZBTB44Q8NCP5 570 aa17.54■□□□□ 0.4
VCX3A-201ENST00000381089 CORO1BQ9BR76 489 aa17.54■□□□□ 0.4
VCX3A-201ENST00000381089 MRPL4Q9BYD3 311 aaKnown RBP17.54■□□□□ 0.4
VCX3A-201ENST00000381089 RAB34Q9BZG1 259 aa17.54■□□□□ 0.4
VCX3A-201ENST00000381089 BRD9Q9H8M2 597 aa17.54■□□□□ 0.4
VCX3A-201ENST00000381089 CYP4F11Q9HBI6 524 aa17.54■□□□□ 0.4
VCX3A-201ENST00000381089 GOLGA2P5Q9HBQ8 144 aa17.54■□□□□ 0.4
VCX3A-201ENST00000381089 ZFP14Q9HCL3 533 aa17.54■□□□□ 0.4
VCX3A-201ENST00000381089 HEBP1Q9NRV9 189 aa17.54■□□□□ 0.4
VCX3A-201ENST00000381089 SMG5Q9UPR3 1016 aaKnown RBP17.54■□□□□ 0.4
VCX3A-201ENST00000381089 NOTCH4Q99466 2003 aa17.54■□□□□ 0.4
VCX3A-201ENST00000381089 PRR5-ARHGAP8B1AHC4 643 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 TBC1D4O60343 1298 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 MICAL2O94851 1124 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 ABLIM3O94929 683 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 ATF2P15336 505 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 CEBPBP17676 345 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 RPL9P32969 192 aaKnown RBP17.53■□□□□ 0.4
VCX3A-201ENST00000381089 NEK4P51957 841 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 NRLP54845 237 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 ARPP19P56211 112 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 ARHGAP8P85298 464 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 DMP1Q13316 513 aaPredicted RBP17.53■□□□□ 0.4
VCX3A-201ENST00000381089 SLC5A9Q2M3M2 681 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 TPGS2Q68CL5 300 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 TANGO2Q6ICL3 276 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 TCEAL8Q8IYN2 117 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 C3orf58Q8NDZ4 430 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 IRF7Q92985 503 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 C8orf76Q96K31 380 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 ACAP3Q96P50 834 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 TCHPQ9BT92 498 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 IER2Q9BTL4 223 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 TRMT61BQ9BVS5 477 aaKnown RBP17.53■□□□□ 0.4
VCX3A-201ENST00000381089 EPC1Q9H2F5 836 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 FOXP1Q9H334 677 aaPredicted RBP17.53■□□□□ 0.4
VCX3A-201ENST00000381089 LRWD1Q9UFC0 647 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 GMEB2Q9UKD1 530 aa17.53■□□□□ 0.4
VCX3A-201ENST00000381089 NOL7Q9UMY1 257 aaKnown RBP17.53■□□□□ 0.4
VCX3A-201ENST00000381089 TRIP11Q15643 1979 aa17.52■□□□□ 0.4
VCX3A-201ENST00000381089 WDR27A2RRH5 827 aa17.52■□□□□ 0.4
VCX3A-201ENST00000381089 OSTNP61366 133 aa17.52■□□□□ 0.4
VCX3A-201ENST00000381089 GUCY1B3Q02153 619 aa17.52■□□□□ 0.4
VCX3A-201ENST00000381089 LMNB2Q03252 620 aa17.52■□□□□ 0.4
VCX3A-201ENST00000381089 TTC38Q5R3I4 469 aa17.52■□□□□ 0.4
VCX3A-201ENST00000381089 CD300LGQ6UXG3 332 aa17.52■□□□□ 0.4
VCX3A-201ENST00000381089 LEMD2Q8NC56 503 aa17.52■□□□□ 0.4
VCX3A-201ENST00000381089 DRC1Q96MC2 740 aa17.52■□□□□ 0.4
VCX3A-201ENST00000381089 ACO2Q99798 780 aaKnown RBP17.52■□□□□ 0.4
VCX3A-201ENST00000381089 PLA2G2FQ9BZM2 168 aa17.52■□□□□ 0.4
VCX3A-201ENST00000381089 CDT1Q9H211 546 aa17.52■□□□□ 0.4
VCX3A-201ENST00000381089 TMEM134Q9H6X4 195 aa17.52■□□□□ 0.4
VCX3A-201ENST00000381089 PRMT8Q9NR22 394 aaPredicted RBP17.52■□□□□ 0.4
VCX3A-201ENST00000381089 RAB23Q9ULC3 237 aa17.52■□□□□ 0.4
VCX3A-201ENST00000381089 MAFFQ9ULX9 164 aa17.52■□□□□ 0.4
VCX3A-201ENST00000381089 KIAA1024Q9UPX6 916 aa17.52■□□□□ 0.4
VCX3A-201ENST00000381089 INSL5Q9Y5Q6 135 aa17.52■□□□□ 0.4
VCX3A-201ENST00000381089 GPR179Q6PRD1 2367 aa17.52■□□□□ 0.39
VCX3A-201ENST00000381089 LILRB5O75023 590 aa17.51■□□□□ 0.39
VCX3A-201ENST00000381089 MCF2P10911 925 aa17.51■□□□□ 0.39
VCX3A-201ENST00000381089 TRAPPC10P48553 1259 aa17.51■□□□□ 0.39
VCX3A-201ENST00000381089 FXR2P51116 673 aaKnown RBP eCLIP17.51■□□□□ 0.39
VCX3A-201ENST00000381089 PEX3P56589 373 aa17.51■□□□□ 0.39
VCX3A-201ENST00000381089 CTXN3Q4LDR2 81 aa17.51■□□□□ 0.39
VCX3A-201ENST00000381089 XKR4Q5GH76 650 aa17.51■□□□□ 0.39
VCX3A-201ENST00000381089 PRSS36Q5K4E3 855 aa17.51■□□□□ 0.39
VCX3A-201ENST00000381089 ZNF280DQ6N043 979 aa17.51■□□□□ 0.39
VCX3A-201ENST00000381089 ALKAL1Q6UXT8 129 aa17.51■□□□□ 0.39
VCX3A-201ENST00000381089 APPL2Q8NEU8 664 aa17.51■□□□□ 0.39
VCX3A-201ENST00000381089 NELL1Q92832 810 aa17.51■□□□□ 0.39
VCX3A-201ENST00000381089 ZNF512Q96ME7 567 aaPredicted RBP17.51■□□□□ 0.39
VCX3A-201ENST00000381089 POLD4Q9HCU8 107 aa17.51■□□□□ 0.39
VCX3A-201ENST00000381089 KMT5AQ9NQR1 393 aa17.51■□□□□ 0.39
VCX3A-201ENST00000381089 DDX19AQ9NUU7 478 aaKnown RBP17.51■□□□□ 0.39
VCX3A-201ENST00000381089 CDV3Q9UKY7 258 aaKnown RBP17.51■□□□□ 0.39
VCX3A-201ENST00000381089 USP18Q9UMW8 372 aa17.51■□□□□ 0.39
VCX3A-201ENST00000381089 NDRG2Q9UN36 371 aaKnown RBP17.51■□□□□ 0.39
VCX3A-201ENST00000381089 DNM3Q9UQ16 869 aa17.51■□□□□ 0.39
VCX3A-201ENST00000381089 RBM19Q9Y4C8 960 aaKnown RBP17.51■□□□□ 0.39
VCX3A-201ENST00000381089 COL4A3Q01955 1670 aa17.51■□□□□ 0.39
VCX3A-201ENST00000381089 KCNE1P15382 129 aa17.5■□□□□ 0.39
VCX3A-201ENST00000381089 PSMC3P17980 439 aa17.5■□□□□ 0.39
VCX3A-201ENST00000381089 IGFBP6P24592 240 aaPredicted RBP17.5■□□□□ 0.39
VCX3A-201ENST00000381089 NPTX2P47972 431 aa17.5■□□□□ 0.39
VCX3A-201ENST00000381089 SOX4Q06945 474 aaPredicted RBP17.5■□□□□ 0.39
VCX3A-201ENST00000381089 MTAPQ13126 283 aa17.5■□□□□ 0.39
VCX3A-201ENST00000381089 GRM2Q14416 872 aa17.5■□□□□ 0.39
VCX3A-201ENST00000381089 PDIA5Q14554 519 aa17.5■□□□□ 0.39
VCX3A-201ENST00000381089 FAM78AQ5JUQ0 283 aa17.5■□□□□ 0.39
VCX3A-201ENST00000381089 CEP120Q8N960 986 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms