RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 PCDHB2Q9Y5E7 798 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 KPNA6O60684 536 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 FTLP02792 175 aaPredicted RBP23.06■■□□□ 1.28
GMDS-202ENST00000380815 MMEP08473 750 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 RBM10P98175 930 aaKnown RBP23.06■■□□□ 1.28
GMDS-202ENST00000380815 TEX35Q5T0J7 233 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 ZNF677Q86XU0 584 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 RPGRIP1Q96KN7 1286 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 ABCB4P21439 1286 aa23.05■■□□□ 1.28
GMDS-202ENST00000380815 GJA9P57773 515 aa23.05■■□□□ 1.28
GMDS-202ENST00000380815 TRPC3Q13507 836 aa23.05■■□□□ 1.28
GMDS-202ENST00000380815 HIC1Q14526 733 aa23.05■■□□□ 1.28
GMDS-202ENST00000380815 RUFY4Q6ZNE9 571 aa23.05■■□□□ 1.28
GMDS-202ENST00000380815 GPR161Q8N6U8 529 aaKnown RBP23.05■■□□□ 1.28
GMDS-202ENST00000380815 ADPGKQ9BRR6 497 aa23.05■■□□□ 1.28
GMDS-202ENST00000380815 THAP2Q9H0W7 228 aa23.05■■□□□ 1.28
GMDS-202ENST00000380815 ASB7Q9H672 318 aa23.05■■□□□ 1.28
GMDS-202ENST00000380815 ZNF185O15231 689 aa23.04■■□□□ 1.28
GMDS-202ENST00000380815 NCK2O43639 380 aa23.04■■□□□ 1.28
GMDS-202ENST00000380815 FTCDO95954 541 aa23.04■■□□□ 1.28
GMDS-202ENST00000380815 HOXC8P31273 242 aa23.04■■□□□ 1.28
GMDS-202ENST00000380815 MYL6P60660 151 aa23.04■■□□□ 1.28
GMDS-202ENST00000380815 TCEAL1Q15170 157 aa23.04■■□□□ 1.28
GMDS-202ENST00000380815 SLFN11Q7Z7L1 901 aa23.04■■□□□ 1.28
GMDS-202ENST00000380815 CREG2Q8IUH2 290 aa23.04■■□□□ 1.28
GMDS-202ENST00000380815 SLC35G2Q8TBE7 412 aa23.04■■□□□ 1.28
GMDS-202ENST00000380815 CALR3Q96L12 384 aaKnown RBP23.04■■□□□ 1.28
GMDS-202ENST00000380815 ANK1P16157 1881 aa23.04■■□□□ 1.28
GMDS-202ENST00000380815 C6orf222P0C671 652 aaPredicted RBP23.04■■□□□ 1.28
GMDS-202ENST00000380815 GNAT1P11488 350 aa23.04■■□□□ 1.28
GMDS-202ENST00000380815 TMEM62Q0P6H9 643 aa23.04■■□□□ 1.28
GMDS-202ENST00000380815 SCARA3Q6AZY7 606 aa23.04■■□□□ 1.28
GMDS-202ENST00000380815 APBB1IPQ7Z5R6 666 aaPredicted RBP23.04■■□□□ 1.28
GMDS-202ENST00000380815 RHOT2Q8IXI1 618 aa23.04■■□□□ 1.28
GMDS-202ENST00000380815 SYCE1Q8N0S2 351 aa23.04■■□□□ 1.28
GMDS-202ENST00000380815 PPP1R13LQ8WUF5 828 aa23.04■■□□□ 1.28
GMDS-202ENST00000380815 CAPZA3Q96KX2 299 aa23.04■■□□□ 1.28
GMDS-202ENST00000380815 MMS19Q96T76 1030 aa23.04■■□□□ 1.28
GMDS-202ENST00000380815 UMODL1Q5DID0 1318 aa23.03■■□□□ 1.28
GMDS-202ENST00000380815 C17orf102A2RUQ5 167 aa23.03■■□□□ 1.28
GMDS-202ENST00000380815 LACTBL1A8MY62 500 aa23.03■■□□□ 1.28
GMDS-202ENST00000380815 MEFVO15553 781 aaPredicted RBP23.03■■□□□ 1.28
GMDS-202ENST00000380815 AOC2O75106 756 aa23.03■■□□□ 1.28
GMDS-202ENST00000380815 DARSP14868 501 aaKnown RBP23.03■■□□□ 1.28
GMDS-202ENST00000380815 PRKCZQ05513 592 aa23.03■■□□□ 1.28
GMDS-202ENST00000380815 DCAF4L1Q3SXM0 396 aa23.03■■□□□ 1.28
GMDS-202ENST00000380815 COG1Q8WTW3 980 aa23.03■■□□□ 1.28
GMDS-202ENST00000380815 NIF3L1Q9GZT8 377 aa23.03■■□□□ 1.28
GMDS-202ENST00000380815 GINS2Q9Y248 185 aa23.03■■□□□ 1.28
GMDS-202ENST00000380815 PCDHB4Q9Y5E5 795 aa23.03■■□□□ 1.28
GMDS-202ENST00000380815 TREHO43280 583 aa23.02■■□□□ 1.28
GMDS-202ENST00000380815 CLSTN1O94985 981 aa23.02■■□□□ 1.28
GMDS-202ENST00000380815 HOXA11P31270 313 aaPredicted RBP23.02■■□□□ 1.28
GMDS-202ENST00000380815 HADHBP55084 474 aaKnown RBP23.02■■□□□ 1.28
GMDS-202ENST00000380815 GPC5P78333 572 aa23.02■■□□□ 1.28
GMDS-202ENST00000380815 NKX3-2P78367 333 aa23.02■■□□□ 1.28
GMDS-202ENST00000380815 DEFB115Q30KQ5 88 aa23.02■■□□□ 1.28
GMDS-202ENST00000380815 SLC10A6Q3KNW5 377 aa23.02■■□□□ 1.28
GMDS-202ENST00000380815 MTERF4Q7Z6M4 381 aaKnown RBP23.02■■□□□ 1.28
GMDS-202ENST00000380815 UBR7Q8N806 425 aa23.02■■□□□ 1.28
GMDS-202ENST00000380815 C7orf31Q8N865 590 aa23.02■■□□□ 1.28
GMDS-202ENST00000380815 CAGE1Q8TC20 777 aa23.02■■□□□ 1.28
GMDS-202ENST00000380815 DNAJB3Q8WWF6 145 aa23.02■■□□□ 1.28
GMDS-202ENST00000380815 TAF4BQ92750 862 aa23.02■■□□□ 1.28
GMDS-202ENST00000380815 ARHGEF26Q96DR7 871 aa23.02■■□□□ 1.28
GMDS-202ENST00000380815 CAPNS2Q96L46 248 aa23.02■■□□□ 1.28
GMDS-202ENST00000380815 XYLT2Q9H1B5 865 aa23.02■■□□□ 1.28
GMDS-202ENST00000380815 UPF3AQ9H1J1 476 aaKnown RBP23.02■■□□□ 1.28
GMDS-202ENST00000380815 CDHR5Q9HBB8 845 aa23.02■■□□□ 1.28
GMDS-202ENST00000380815 MYADML2A6NDP7 307 aa23.01■■□□□ 1.27
GMDS-202ENST00000380815 SEPT4O43236 478 aa23.01■■□□□ 1.27
GMDS-202ENST00000380815 NFICP08651 508 aa23.01■■□□□ 1.27
GMDS-202ENST00000380815 GNASQ5JWF2 1037 aa23.01■■□□□ 1.27
GMDS-202ENST00000380815 TMEM270Q6UE05 265 aa23.01■■□□□ 1.27
GMDS-202ENST00000380815 CATSPER4Q7RTX7 472 aa23.01■■□□□ 1.27
GMDS-202ENST00000380815 ZNF572Q7Z3I7 529 aaPredicted RBP23.01■■□□□ 1.27
GMDS-202ENST00000380815 NME8Q8N427 588 aa23.01■■□□□ 1.27
GMDS-202ENST00000380815 ACAP3Q96P50 834 aa23.01■■□□□ 1.27
GMDS-202ENST00000380815 OSMRQ99650 979 aa23.01■■□□□ 1.27
GMDS-202ENST00000380815 OSGEPQ9NPF4 335 aa23.01■■□□□ 1.27
GMDS-202ENST00000380815 RNF14Q9UBS8 474 aa23.01■■□□□ 1.27
GMDS-202ENST00000380815 MROH7Q68CQ1 1323 aa23.01■■□□□ 1.27
GMDS-202ENST00000380815 FGFR4P22455 802 aa23.01■■□□□ 1.27
GMDS-202ENST00000380815 EIF4BP23588 611 aaKnown RBP23.01■■□□□ 1.27
GMDS-202ENST00000380815 GRM5P41594 1212 aa23.01■■□□□ 1.27
GMDS-202ENST00000380815 SP3Q02447 781 aa23.01■■□□□ 1.27
GMDS-202ENST00000380815 ZNF699Q32M78 642 aa23.01■■□□□ 1.27
GMDS-202ENST00000380815 JADE1Q6IE81 842 aa23.01■■□□□ 1.27
GMDS-202ENST00000380815 FAXDC2Q96IV6 333 aa23.01■■□□□ 1.27
GMDS-202ENST00000380815 MTG1Q9BT17 334 aaPredicted RBP23.01■■□□□ 1.27
GMDS-202ENST00000380815 SPC25Q9HBM1 224 aa23.01■■□□□ 1.27
GMDS-202ENST00000380815 PDE2AO00408 941 aaPredicted RBP23■■□□□ 1.27
GMDS-202ENST00000380815 H2AFXP16104 143 aaPredicted RBP23■■□□□ 1.27
GMDS-202ENST00000380815 CXCR5P32302 372 aa23■■□□□ 1.27
GMDS-202ENST00000380815 ZNF132P52740 706 aa23■■□□□ 1.27
GMDS-202ENST00000380815 ZNF200P98182 395 aaPredicted RBP23■■□□□ 1.27
GMDS-202ENST00000380815 ITIH3Q06033 890 aa23■■□□□ 1.27
GMDS-202ENST00000380815 RPS6KA1Q15418 735 aa23■■□□□ 1.27
GMDS-202ENST00000380815 CLEC16AQ2KHT3 1053 aa23■■□□□ 1.27
GMDS-202ENST00000380815 ACAD10Q6JQN1 1059 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms