RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 EPHB1P54762 984 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 SNRPFP62306 86 aaKnown RBP13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 NCOA4Q13772 614 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 XKR3Q5GH77 459 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 SMYD3Q9H7B4 428 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 ATRNO75882 1429 aa13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 CCDC195A0A1B0GUA6 201 aa13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 HSPA4LO95757 839 aa13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 AP3M2P53677 418 aa13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 ITKQ08881 620 aa13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 DNAJC3Q13217 504 aa13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 BAATQ14032 418 aaPredicted RBP13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 TMC3Q7Z5M5 1100 aa13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 HOXC10Q9NYD6 342 aa13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 NUB1Q9Y5A7 615 aa13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 RICTORQ6R327 1708 aa13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 CES2O00748 559 aa13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 CENPCQ03188 943 aa13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 ACAD10Q6JQN1 1059 aa13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 CBWD2Q8IUF1 395 aa13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 CEP120Q8N960 986 aa13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 ALKBH8Q96BT7 664 aaKnown RBP13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 WRNIP1Q96S55 665 aa13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 SERPINI1Q99574 410 aa13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 HNRNPH3P31942 346 aaKnown RBP13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 NOP14P78316 857 aaKnown RBP13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 ART3Q13508 389 aa13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 ST13P4Q8IZP2 240 aaPredicted RBP13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 TNFRSF25Q93038 417 aa13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 TMEM143Q96AN5 459 aa13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 DDX20Q9UHI6 824 aaKnown RBP13.44□□□□□ -0.26
DNMT3A-204ENST00000380756 SPATA31A5Q5VU36 1347 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 SPATA31A7Q8IWB4 1347 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 HNRNPCL1O60812 293 aaKnown RBP13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 SRGAP2BP0DMP2 458 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 MTM1Q13496 603 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 RIBC1Q8N443 379 aaPredicted RBP13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 MCUQ8NE86 351 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 SLC20A1Q8WUM9 679 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 MCEEQ96PE7 176 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 VPS11Q9H270 941 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 UNC45AQ9H3U1 944 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 PPCSQ9HAB8 311 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 FBXO28Q9NVF7 368 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 TMEM51Q9NW97 253 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 COL5A2P05997 1499 aaPredicted RBP13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 NR3C2P08235 984 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 COPS2P61201 443 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 GABPAQ06546 454 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 WDR72Q3MJ13 1102 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 DCLK2Q8N568 766 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 BAP1Q92560 729 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 LRGUKQ96M69 825 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 KIFC3Q9BVG8 833 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 CDC42EP4Q9H3Q1 356 aaKnown RBP13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 ACAD9Q9H845 621 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 UBN1Q9NPG3 1134 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 FBXO40Q9UH90 709 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 DCCP43146 1447 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 MON2Q7Z3U7 1717 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 RPS6KA5O75582 802 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 TTMPQ5BVD1 217 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 NT5DC3Q86UY8 548 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 SIX6OS1Q8N1H7 587 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 AGBL1Q96MI9 1066 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 TSSK1BQ9BXA7 367 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 NACA2Q9H009 215 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 C2orf40Q9H1Z8 148 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 WDR46O15213 610 aaKnown RBP13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 KIF1CO43896 1103 aaKnown RBP13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 CCDC22O60826 627 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 TRPA1O75762 1119 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 CYP11B1P15538 503 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 CIITAP33076 1130 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 PGM1P36871 562 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 PIGHQ14442 188 aaPredicted RBP13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 ITIH4Q14624 930 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 ZNF677Q86XU0 584 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 LPAR1Q92633 364 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 WWP1Q9H0M0 922 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 FAM96AQ9H5X1 160 aa13.43□□□□□ -0.26
DNMT3A-204ENST00000380756 Q4G0T1 1027 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 C1orf228Q6PIY5 440 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 C3orf62Q6ZUJ4 267 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 RFX8Q6ZV50 586 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 CYP2W1Q8TAV3 490 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 HDAC11Q96DB2 347 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 KLF6Q99612 283 aaPredicted RBP13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 LBHD1Q9BQE6 289 aaPredicted RBP13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 EFHD1Q9BUP0 239 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 RPAP3Q9H6T3 665 aaPredicted RBP13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 GPRC5CQ9NQ84 441 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 ANKEF1Q9NU02 776 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 NDE1Q9NXR1 346 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 FIS1Q9Y3D6 152 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 ARP10275 920 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 EFNA5P52803 228 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 STX1BP61266 288 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 EVX2Q03828 476 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 LONP2Q86WA8 852 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms