RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 EHHADHQ08426 723 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 ARHGEF6Q15052 776 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 C6orf118Q5T5N4 469 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 NEK10Q6ZWH5 1172 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 GPIHBP1Q8IV16 184 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 DIS3L2Q8IYB7 885 aaKnown RBP7.93□□□□□ -1.14
CDKL5-201ENST00000379989 TRPC4APQ8TEL6 797 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 STAMQ92783 540 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 TGS1Q96RS0 853 aaKnown RBP7.93□□□□□ -1.14
CDKL5-201ENST00000379989 FNBP1Q96RU3 617 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 FMO2Q99518 471 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 ZMYND12Q9H0C1 365 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 PABPC3Q9H361 631 aaKnown RBP7.93□□□□□ -1.14
CDKL5-201ENST00000379989 EMILIN3Q9NT22 766 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 LRRC4BQ9NT99 713 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 AMACRQ9UHK6 382 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 TTC7AQ9ULT0 858 aaPredicted RBP7.93□□□□□ -1.14
CDKL5-201ENST00000379989 FAF1Q9UNN5 650 aaPredicted RBP7.93□□□□□ -1.14
CDKL5-201ENST00000379989 PLAGL2Q9UPG8 496 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 UTP11Q9Y3A2 253 aaKnown RBP7.93□□□□□ -1.14
CDKL5-201ENST00000379989 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.93□□□□□ -1.14
CDKL5-201ENST00000379989 GREB1LQ9C091 1923 aaPredicted RBP7.93□□□□□ -1.14
CDKL5-201ENST00000379989 BAZ2AQ9UIF9 1905 aaKnown RBP7.93□□□□□ -1.14
CDKL5-201ENST00000379989 LOC105371267A0A1B0GV96 52 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 TMEM120BA0PK00 339 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 CCDC160A6NGH7 325 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 TSPY2A6NKD2 308 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 DKC1O60832 514 aaKnown RBP eCLIP7.93□□□□□ -1.14
CDKL5-201ENST00000379989 GH1P01241 217 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 HNRNPH3P31942 346 aaKnown RBP7.93□□□□□ -1.14
CDKL5-201ENST00000379989 SLC1A4P43007 532 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 ANKDD1AQ495B1 522 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 ASPRV1Q53RT3 343 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 DENND2CQ68D51 928 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 ANO5Q75V66 913 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 SFR1Q86XK3 245 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 ANKRD13BQ86YJ7 626 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 C2CD5Q86YS7 1000 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 CROCCP3Q8IVE0 287 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 ZFP28Q8NHY6 868 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 SKA1Q96BD8 255 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 AK8Q96MA6 479 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 NUP85Q9BW27 656 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 PLVAPQ9BX97 442 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 DBR1Q9UK59 544 aaKnown RBP7.93□□□□□ -1.14
CDKL5-201ENST00000379989 COQ6Q9Y2Z9 468 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 PCDHB2Q9Y5E7 798 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 TAF1P21675 1872 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 CNTNAP5Q8WYK1 1306 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 PRKAB2O43741 272 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 TFPTP0C1Z6 253 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 HOXD13P35453 343 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 BCAP31P51572 246 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 CDR2Q01850 454 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 AUHQ13825 339 aaKnown RBP7.92□□□□□ -1.14
CDKL5-201ENST00000379989 SLC29A2Q14542 456 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 NR1D2Q14995 579 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 VSTM1Q6UX27 236 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 TAOK1Q7L7X3 1001 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 ADGRA1Q86SQ6 560 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 ALDH16A1Q8IZ83 802 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 METTL25Q8N6Q8 603 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 MIGA1Q8NAN2 632 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 SLC16A10Q8TF71 515 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 EPSTI1Q96J88 318 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 COX4I2Q96KJ9 171 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 CELF4Q9BZC1 486 aaKnown RBP7.92□□□□□ -1.14
CDKL5-201ENST00000379989 PARVBQ9HBI1 364 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 SCHIP1Q9P0W5 487 aaPredicted RBP7.92□□□□□ -1.14
CDKL5-201ENST00000379989 SNED1Q8TER0 1413 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 XPOTO43592 962 aaKnown RBP7.92□□□□□ -1.14
CDKL5-201ENST00000379989 TFAP2AP05549 437 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 GNA11P29992 359 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 RCVRNP35243 200 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 LONP1P36776 959 aaKnown RBP7.92□□□□□ -1.14
CDKL5-201ENST00000379989 EIF2B2P49770 351 aaKnown RBP7.92□□□□□ -1.14
CDKL5-201ENST00000379989 MKRN3Q13064 507 aaKnown RBP7.92□□□□□ -1.14
CDKL5-201ENST00000379989 IL23RQ5VWK5 629 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 CCDC82Q8N4S0 544 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 ZNF384Q8TF68 577 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 STMN2Q93045 179 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 BLZF1Q9H2G9 400 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 ARMC7Q9H6L4 198 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 MKNK2Q9HBH9 465 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 MCM9Q9NXL9 1143 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 PPP1R9AQ9ULJ8 1098 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 RBMX2Q9Y388 322 aaKnown RBP7.92□□□□□ -1.14
CDKL5-201ENST00000379989 TLL2Q9Y6L7 1015 aa7.92□□□□□ -1.14
CDKL5-201ENST00000379989 A0A088AWK7 358 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 ANKRD34BA5PLL1 514 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 TRMUO75648 421 aaKnown RBP7.91□□□□□ -1.14
CDKL5-201ENST00000379989 PRKCIP41743 596 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 CTAG1AP78358 180 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 CD300CQ08708 224 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 HNRNPDQ14103 355 aaKnown RBP7.91□□□□□ -1.14
CDKL5-201ENST00000379989 NADK2Q4G0N4 442 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 FOXR2Q6PJQ5 311 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 GRAMD2AQ8IUY3 354 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 PASD1Q8IV76 773 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 FAM20CQ8IXL6 584 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms