RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 ANKRD33Q7Z3H0 272 aa26.43■■□□□ 1.82
ECHDC3-201ENST00000379215 CCAR2Q8N163 923 aaKnown RBP26.43■■□□□ 1.82
ECHDC3-201ENST00000379215 KIF12Q96FN5 646 aa26.43■■□□□ 1.82
ECHDC3-201ENST00000379215 FAM105AQ9NUU6 356 aa26.43■■□□□ 1.82
ECHDC3-201ENST00000379215 ARHGAP20Q9P2F6 1191 aa26.43■■□□□ 1.82
ECHDC3-201ENST00000379215 PCDHB2Q9Y5E7 798 aa26.43■■□□□ 1.82
ECHDC3-201ENST00000379215 RALGAPA2Q2PPJ7 1873 aa26.43■■□□□ 1.82
ECHDC3-201ENST00000379215 NDUFA10O95299 355 aa26.43■■□□□ 1.82
ECHDC3-201ENST00000379215 ATICP31939 592 aa26.43■■□□□ 1.82
ECHDC3-201ENST00000379215 KRT83P78385 493 aa26.43■■□□□ 1.82
ECHDC3-201ENST00000379215 ARHGAP44Q17R89 818 aa26.43■■□□□ 1.82
ECHDC3-201ENST00000379215 HGSNATQ68CP4 663 aa26.43■■□□□ 1.82
ECHDC3-201ENST00000379215 LRRC8DQ7L1W4 858 aa26.43■■□□□ 1.82
ECHDC3-201ENST00000379215 VPS36Q86VN1 386 aa26.43■■□□□ 1.82
ECHDC3-201ENST00000379215 TOX2Q96NM4 488 aa26.43■■□□□ 1.82
ECHDC3-201ENST00000379215 SPTLC3Q9NUV7 552 aa26.43■■□□□ 1.82
ECHDC3-201ENST00000379215 MEFVO15553 781 aaPredicted RBP26.42■■□□□ 1.82
ECHDC3-201ENST00000379215 XKR4Q5GH76 650 aa26.42■■□□□ 1.82
ECHDC3-201ENST00000379215 TRAF7Q6Q0C0 670 aa26.42■■□□□ 1.82
ECHDC3-201ENST00000379215 ALKAL1Q6UXT8 129 aa26.42■■□□□ 1.82
ECHDC3-201ENST00000379215 SLC39A5Q6ZMH5 540 aa26.42■■□□□ 1.82
ECHDC3-201ENST00000379215 SHC3Q92529 594 aa26.42■■□□□ 1.82
ECHDC3-201ENST00000379215 GPR88Q9GZN0 384 aa26.42■■□□□ 1.82
ECHDC3-201ENST00000379215 PARP2Q9UGN5 583 aa26.42■■□□□ 1.82
ECHDC3-201ENST00000379215 DCDC2CA8MYV0 355 aa26.41■■□□□ 1.82
ECHDC3-201ENST00000379215 EIF3CLB5ME19 914 aaKnown RBP26.41■■□□□ 1.82
ECHDC3-201ENST00000379215 AKR1B10O60218 316 aa26.41■■□□□ 1.82
ECHDC3-201ENST00000379215 CLSTN1O94985 981 aa26.41■■□□□ 1.82
ECHDC3-201ENST00000379215 KCNE1P15382 129 aa26.41■■□□□ 1.82
ECHDC3-201ENST00000379215 TOGARAM2Q6ZUX3 1019 aa26.41■■□□□ 1.82
ECHDC3-201ENST00000379215 IRF2BP2Q7Z5L9 587 aa26.41■■□□□ 1.82
ECHDC3-201ENST00000379215 SMG8Q8ND04 991 aaKnown RBP26.41■■□□□ 1.82
ECHDC3-201ENST00000379215 BEST2Q8NFU1 509 aa26.41■■□□□ 1.82
ECHDC3-201ENST00000379215 EIF3CQ99613 913 aaKnown RBP26.41■■□□□ 1.82
ECHDC3-201ENST00000379215 PI4K2AQ9BTU6 479 aa26.41■■□□□ 1.82
ECHDC3-201ENST00000379215 UBQLN1Q9UMX0 589 aaKnown RBP26.41■■□□□ 1.82
ECHDC3-201ENST00000379215 PPP2R2CQ9Y2T4 447 aa26.41■■□□□ 1.82
ECHDC3-201ENST00000379215 HES2Q9Y543 173 aa26.41■■□□□ 1.82
ECHDC3-201ENST00000379215 ANK1P16157 1881 aa26.4■■□□□ 1.82
ECHDC3-201ENST00000379215 EVI5O60447 810 aa26.4■■□□□ 1.82
ECHDC3-201ENST00000379215 ZNF623O75123 536 aa26.4■■□□□ 1.82
ECHDC3-201ENST00000379215 LRRN2O75325 713 aa26.4■■□□□ 1.82
ECHDC3-201ENST00000379215 OFD1O75665 1012 aa26.4■■□□□ 1.82
ECHDC3-201ENST00000379215 GFPT2O94808 682 aa26.4■■□□□ 1.82
ECHDC3-201ENST00000379215 PARNO95453 639 aaKnown RBP26.4■■□□□ 1.82
ECHDC3-201ENST00000379215 EIF4A3P38919 411 aaKnown RBP26.4■■□□□ 1.82
ECHDC3-201ENST00000379215 RBP5P82980 135 aa26.4■■□□□ 1.82
ECHDC3-201ENST00000379215 ARID5AQ03989 594 aa26.4■■□□□ 1.82
ECHDC3-201ENST00000379215 DSC3Q14574 896 aa26.4■■□□□ 1.82
ECHDC3-201ENST00000379215 MTF1Q14872 753 aa26.4■■□□□ 1.82
ECHDC3-201ENST00000379215 SPA17Q15506 151 aa26.4■■□□□ 1.82
ECHDC3-201ENST00000379215 ZNF699Q32M78 642 aa26.4■■□□□ 1.82
ECHDC3-201ENST00000379215 TXLNBQ8N3L3 684 aa26.4■■□□□ 1.82
ECHDC3-201ENST00000379215 C1orf127Q8N9H9 656 aa26.4■■□□□ 1.82
ECHDC3-201ENST00000379215 KREMEN1Q96MU8 473 aa26.4■■□□□ 1.82
ECHDC3-201ENST00000379215 APOL6Q9BWW8 343 aa26.4■■□□□ 1.82
ECHDC3-201ENST00000379215 ADGRG1Q9Y653 693 aa26.4■■□□□ 1.82
ECHDC3-201ENST00000379215 PQBP1O60828 265 aaKnown RBP26.39■■□□□ 1.82
ECHDC3-201ENST00000379215 COL6A1P12109 1028 aa26.39■■□□□ 1.82
ECHDC3-201ENST00000379215 ITGA4P13612 1032 aa26.39■■□□□ 1.82
ECHDC3-201ENST00000379215 MNX1P50219 401 aaPredicted RBP26.39■■□□□ 1.82
ECHDC3-201ENST00000379215 KIF11P52732 1056 aa26.39■■□□□ 1.82
ECHDC3-201ENST00000379215 CUL2Q13617 745 aa26.39■■□□□ 1.82
ECHDC3-201ENST00000379215 TATDN2Q93075 761 aa26.39■■□□□ 1.82
ECHDC3-201ENST00000379215 FAM84AQ96KN4 292 aa26.39■■□□□ 1.82
ECHDC3-201ENST00000379215 FTHL17Q9BXU8 183 aa26.39■■□□□ 1.82
ECHDC3-201ENST00000379215 NIF3L1Q9GZT8 377 aa26.39■■□□□ 1.82
ECHDC3-201ENST00000379215 VRTNQ9H8Y1 702 aa26.39■■□□□ 1.82
ECHDC3-201ENST00000379215 LUC7LQ9NQ29 371 aaKnown RBP26.39■■□□□ 1.82
ECHDC3-201ENST00000379215 DPP3Q9NY33 737 aa26.39■■□□□ 1.82
ECHDC3-201ENST00000379215 FOXN3O00409 490 aaPredicted RBP26.39■■□□□ 1.81
ECHDC3-201ENST00000379215 STAU1O95793 577 aaKnown RBP26.39■■□□□ 1.81
ECHDC3-201ENST00000379215 KRT19P08727 400 aa26.39■■□□□ 1.81
ECHDC3-201ENST00000379215 P4HA1P13674 534 aa26.39■■□□□ 1.81
ECHDC3-201ENST00000379215 AKAP5P24588 427 aa26.39■■□□□ 1.81
ECHDC3-201ENST00000379215 MYL6P60660 151 aa26.39■■□□□ 1.81
ECHDC3-201ENST00000379215 YWHAEP62258 255 aaKnown RBP26.39■■□□□ 1.81
ECHDC3-201ENST00000379215 MRPL10Q7Z7H8 261 aaKnown RBP26.39■■□□□ 1.81
ECHDC3-201ENST00000379215 FAM71AQ8IYT1 594 aa26.39■■□□□ 1.81
ECHDC3-201ENST00000379215 PGBD4Q96DM1 585 aa26.39■■□□□ 1.81
ECHDC3-201ENST00000379215 IFIH1Q9BYX4 1025 aaKnown RBP26.39■■□□□ 1.81
ECHDC3-201ENST00000379215 HAUS4Q9H6D7 363 aa26.39■■□□□ 1.81
ECHDC3-201ENST00000379215 UBN1Q9NPG3 1134 aa26.39■■□□□ 1.81
ECHDC3-201ENST00000379215 GIT1Q9Y2X7 761 aa26.39■■□□□ 1.81
ECHDC3-201ENST00000379215 CEP350Q5VT06 3117 aa26.38■■□□□ 1.81
ECHDC3-201ENST00000379215 CST3P01034 146 aaPredicted RBP26.38■■□□□ 1.81
ECHDC3-201ENST00000379215 ITGB3P05106 788 aa26.38■■□□□ 1.81
ECHDC3-201ENST00000379215 CYP3A5P20815 502 aa26.38■■□□□ 1.81
ECHDC3-201ENST00000379215 ZBTB6Q15916 424 aa26.38■■□□□ 1.81
ECHDC3-201ENST00000379215 TMEM106CQ9BVX2 250 aa26.38■■□□□ 1.81
ECHDC3-201ENST00000379215 FAM124BQ9H5Z6 455 aaPredicted RBP26.38■■□□□ 1.81
ECHDC3-201ENST00000379215 SIX4Q9UIU6 781 aa26.38■■□□□ 1.81
ECHDC3-201ENST00000379215 CITO14578 2027 aa26.38■■□□□ 1.81
ECHDC3-201ENST00000379215 A0A0U1RQF3 1178 aa26.37■■□□□ 1.81
ECHDC3-201ENST00000379215 LCA5LO95447 670 aa26.37■■□□□ 1.81
ECHDC3-201ENST00000379215 PLEKP08567 350 aaPredicted RBP26.37■■□□□ 1.81
ECHDC3-201ENST00000379215 ASTE1Q2TB18 679 aaPredicted RBP26.37■■□□□ 1.81
ECHDC3-201ENST00000379215 DESI2Q9BSY9 194 aa26.37■■□□□ 1.81
ECHDC3-201ENST00000379215 XYLT2Q9H1B5 865 aa26.37■■□□□ 1.81
ECHDC3-201ENST00000379215 APOBEC3GQ9HC16 384 aaKnown RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms