RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 REPS2Q8NFH8 660 aa15.05■□□□□ 0
SHROOM1-203ENST00000378679 FAM49BQ9NUQ9 324 aa15.05■□□□□ 0
SHROOM1-203ENST00000378679 MYPNQ86TC9 1320 aa15.05■□□□□ 0
SHROOM1-203ENST00000378679 LPXNO60711 386 aa15.05■□□□□ -0
SHROOM1-203ENST00000378679 COMTP21964 271 aa15.05■□□□□ -0
SHROOM1-203ENST00000378679 CHRNA3P32297 505 aa15.05■□□□□ -0
SHROOM1-203ENST00000378679 NOTUMQ6P988 496 aa15.05■□□□□ -0
SHROOM1-203ENST00000378679 DHX38Q92620 1227 aaKnown RBP15.05■□□□□ -0
SHROOM1-203ENST00000378679 ELMO3Q96BJ8 720 aa15.05■□□□□ -0
SHROOM1-203ENST00000378679 CCDC97Q96F63 343 aaPredicted RBP15.05■□□□□ -0
SHROOM1-203ENST00000378679 ZBTB45Q96K62 511 aaPredicted RBP15.05■□□□□ -0
SHROOM1-203ENST00000378679 L2HGDHQ9H9P8 463 aa15.05■□□□□ -0
SHROOM1-203ENST00000378679 TBK1Q9UHD2 729 aa15.05■□□□□ -0
SHROOM1-203ENST00000378679 PDE4DIPQ5VU43 2346 aa15.05■□□□□ -0
SHROOM1-203ENST00000378679 PPFIA4O75335 1185 aa15.05■□□□□ -0
SHROOM1-203ENST00000378679 ADCYAP1R1P41586 468 aa15.05■□□□□ -0
SHROOM1-203ENST00000378679 JAG1P78504 1218 aa15.05■□□□□ -0
SHROOM1-203ENST00000378679 NNTQ13423 1086 aa15.05■□□□□ -0
SHROOM1-203ENST00000378679 ALS2CLQ60I27 953 aa15.05■□□□□ -0
SHROOM1-203ENST00000378679 DLK2Q6UY11 383 aa15.05■□□□□ -0
SHROOM1-203ENST00000378679 PDIK1LQ8N165 341 aa15.05■□□□□ -0
SHROOM1-203ENST00000378679 GABPB2Q8TAK5 448 aaPredicted RBP15.05■□□□□ -0
SHROOM1-203ENST00000378679 CCHCR1Q8TD31 782 aa15.05■□□□□ -0
SHROOM1-203ENST00000378679 C7orf43Q8WVR3 580 aa15.05■□□□□ -0
SHROOM1-203ENST00000378679 RBM12Q9NTZ6 932 aaKnown RBP15.05■□□□□ -0
SHROOM1-203ENST00000378679 KLHL11Q9NVR0 708 aa15.05■□□□□ -0
SHROOM1-203ENST00000378679 KLK14Q9P0G3 267 aa15.05■□□□□ -0
SHROOM1-203ENST00000378679 SPEF2Q9C093 1822 aa15.05■□□□□ -0
SHROOM1-203ENST00000378679 ATRNL1Q5VV63 1379 aa15.05■□□□□ -0
SHROOM1-203ENST00000378679 SPOPLQ6IQ16 392 aa15.04■□□□□ -0
SHROOM1-203ENST00000378679 PARD3BQ8TEW8 1205 aa15.04■□□□□ -0
SHROOM1-203ENST00000378679 EHD2Q9NZN4 543 aa15.04■□□□□ -0
SHROOM1-203ENST00000378679 ADCY3O60266 1144 aa15.04■□□□□ -0
SHROOM1-203ENST00000378679 USP2O75604 605 aaPredicted RBP15.04■□□□□ -0
SHROOM1-203ENST00000378679 BRD2P25440 801 aaKnown RBP15.04■□□□□ -0
SHROOM1-203ENST00000378679 CLK2P49760 499 aaKnown RBP15.04■□□□□ -0
SHROOM1-203ENST00000378679 MRPS9P82933 396 aaKnown RBP15.04■□□□□ -0
SHROOM1-203ENST00000378679 TSPY1Q01534 308 aa15.04■□□□□ -0
SHROOM1-203ENST00000378679 ARHGEF18Q6ZSZ5 1173 aa15.04■□□□□ -0
SHROOM1-203ENST00000378679 TRAPPC11Q7Z392 1133 aa15.04■□□□□ -0
SHROOM1-203ENST00000378679 CCDC110Q8TBZ0 833 aa15.04■□□□□ -0
SHROOM1-203ENST00000378679 INPP4AQ96PE3 977 aaPredicted RBP15.04■□□□□ -0
SHROOM1-203ENST00000378679 GMLQ99445 158 aa15.04■□□□□ -0
SHROOM1-203ENST00000378679 NT5C1AQ9BXI3 368 aa15.04■□□□□ -0
SHROOM1-203ENST00000378679 SLITRK6Q9H5Y7 841 aa15.04■□□□□ -0
SHROOM1-203ENST00000378679 ATP8B3O60423 1300 aa15.04■□□□□ -0
SHROOM1-203ENST00000378679 ANKRD63C9JTQ0 380 aa15.04■□□□□ -0
SHROOM1-203ENST00000378679 CFAP157Q5JU67 520 aa15.04■□□□□ -0
SHROOM1-203ENST00000378679 IRF2BP1Q8IU81 584 aa15.04■□□□□ -0
SHROOM1-203ENST00000378679 DNAAF3Q8N9W5 541 aa15.04■□□□□ -0
SHROOM1-203ENST00000378679 COL20A1Q9P218 1284 aa15.04■□□□□ -0
SHROOM1-203ENST00000378679 NOVA2Q9UNW9 492 aaKnown RBP15.04■□□□□ -0
SHROOM1-203ENST00000378679 SNED1Q8TER0 1413 aa15.04■□□□□ -0
SHROOM1-203ENST00000378679 RASGRF2O14827 1237 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 MMEP08473 750 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 INHBAP08476 426 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 CYP11B1P15538 503 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 PDGFRAP16234 1089 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 FCGRTP55899 365 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 ARL13BQ3SXY8 428 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 HYIQ5T013 277 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 FBXW10Q5XX13 1052 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 LBX2Q6XYB7 198 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 TTC13Q8NBP0 860 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 MICAL1Q8TDZ2 1067 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 TATDN2Q93075 761 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 ATP2A3Q93084 1043 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 MTMR8Q96EF0 704 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 NCAPGQ9BPX3 1015 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 TAF1DQ9H5J8 278 aaPredicted RBP15.03■□□□□ -0
SHROOM1-203ENST00000378679 GTF3C4Q9UKN8 822 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 EIF4E1BA6NMX2 242 aaKnown RBP15.03■□□□□ -0
SHROOM1-203ENST00000378679 CDH6P55285 790 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 CDR2Q01850 454 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 CBWD6Q4V339 395 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 CBWD3Q5JTY5 395 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 CBWD5Q5RIA9 395 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 GJC2Q5T442 439 aaPredicted RBP15.03■□□□□ -0
SHROOM1-203ENST00000378679 MAP4K3Q8IVH8 894 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 MCEEQ96PE7 176 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 VTA1Q9NP79 307 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 INTS9Q9NV88 658 aaKnown RBP15.03■□□□□ -0
SHROOM1-203ENST00000378679 LCMT1Q9UIC8 334 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 STAP1Q9ULZ2 295 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 KCNH4Q9UQ05 1017 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 GRAP2O75791 330 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 APPL2Q8NEU8 664 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 TPCN2Q8NHX9 752 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 SLC20A1Q8WUM9 679 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 OSMRQ99650 979 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 AIPL1Q9NZN9 384 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 INTUQ9ULD6 942 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 MAGED2Q9UNF1 606 aaPredicted RBP15.03■□□□□ -0
SHROOM1-203ENST00000378679 SIK3Q9Y2K2 1263 aa15.03■□□□□ -0
SHROOM1-203ENST00000378679 STAG3L1P0CL83 205 aa15.02■□□□□ -0
SHROOM1-203ENST00000378679 LCP1P13796 627 aa15.02■□□□□ -0
SHROOM1-203ENST00000378679 SLC1A1P43005 524 aa15.02■□□□□ -0
SHROOM1-203ENST00000378679 MAGEA9P43362 315 aa15.02■□□□□ -0
SHROOM1-203ENST00000378679 MYL6P60660 151 aa15.02■□□□□ -0
SHROOM1-203ENST00000378679 ACTN3Q08043 901 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms