RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 IVDP26440 423 aa20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 ACOT2P49753 483 aa20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 LIG4P49917 911 aa20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 RTP1P59025 263 aa20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 DRP2Q13474 957 aa20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 LONRF1Q17RB8 773 aa20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 ZACNQ401N2 412 aa20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 NBPF12Q5TAG4 269 aaPredicted RBP20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 MON1BQ7L1V2 547 aa20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 PASD1Q8IV76 773 aa20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 MYCBPQ99417 103 aaPredicted RBP20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 DCLK3Q9C098 648 aa20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 DNAJC17Q9NVM6 304 aaKnown RBP20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 SLC9A2Q9UBY0 812 aa20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 FZD1Q9UP38 647 aa20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 CYP1A1P04798 512 aaPredicted RBP20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 PIK3CAP42336 1068 aa20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 CENPCQ03188 943 aa20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 SF3A3Q12874 501 aaKnown RBP eCLIP20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 TNFAIP1Q13829 316 aa20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 PTK6Q13882 451 aa20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 PSMD6Q15008 389 aa20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 IFT74Q96LB3 600 aa20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 PLVAPQ9BX97 442 aa20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 ZNF214Q9UL59 606 aaPredicted RBP20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 PCDHB2Q9Y5E7 798 aa20.81■□□□□ 0.92
SHROOM1-202ENST00000378676 GOLGA6L7A0A1B0GV03 622 aa20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 C4BPAP04003 597 aaKnown RBP20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 TNNI1P19237 187 aa20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 ACO1P21399 889 aaKnown RBP20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 CLDN10P78369 228 aa20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 ENPEPQ07075 957 aa20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 PLCB4Q15147 1175 aa20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 ZBTB41Q5SVQ8 909 aa20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 ABHD15Q6UXT9 468 aa20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 LRRC34Q8IZ02 419 aa20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 ZNF526Q8TF50 670 aaPredicted RBP20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 PRMT1Q99873 361 aaKnown RBP20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 C11orf70Q9BRQ4 267 aa20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 CCDC113Q9H0I3 377 aa20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 APOBEC3GQ9HC16 384 aaKnown RBP20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 GINM1Q9NU53 330 aa20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 INTS9Q9NV88 658 aaKnown RBP20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 ZNF541Q9H0D2 1346 aa20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 ZBTB7AO95365 584 aa20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 CHRM1P11229 460 aaPredicted RBP20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 NSFP46459 744 aaKnown RBP20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 BACE1P56817 501 aa20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 MFSD5Q6N075 450 aa20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 CRELD2Q6UXH1 353 aaPredicted RBP20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 TRMT10CQ7L0Y3 403 aaKnown RBP20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 ZBTB45Q96K62 511 aaPredicted RBP20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 FAM118BQ9BPY3 351 aa20.8■□□□□ 0.92
SHROOM1-202ENST00000378676 NFASCO94856 1347 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 DSG3P32926 999 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 ITGA8P53708 1063 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 TAS2R40P59535 323 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 ZNF280AP59817 542 aaPredicted RBP20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 EMC2Q15006 297 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 SAMD7Q7Z3H4 446 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 CROCCP2Q86T23 111 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 EXOC3L1Q86VI1 746 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 ZNF677Q86XU0 584 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 ASAP3Q8TDY4 903 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 NSUN6Q8TEA1 469 aaKnown RBP20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 ZKSCAN4Q969J2 545 aaPredicted RBP20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 TMEM143Q96AN5 459 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 SNF8Q96H20 258 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 PWWP2AQ96N64 755 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 HEMGNQ9BXL5 484 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 ACTR5Q9H9F9 607 aaPredicted RBP20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 MAFGO15525 162 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 DKC1O60832 514 aaKnown RBP eCLIP20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 ATP2C2O75185 946 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 PROSCO94903 275 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 FDX1P10109 184 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 MYBL1P10243 752 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 IFNAR2P48551 515 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 VPS41P49754 854 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 CCT6BQ92526 530 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 FNBP1Q96RU3 617 aa20.79■□□□□ 0.92
SHROOM1-202ENST00000378676 GJB6O95452 261 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 EDN1P05305 212 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 RALAP11233 206 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 ATP4AP20648 1035 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 SLC1A1P43005 524 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 HMGCS2P54868 508 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 TMEM132BQ14DG7 1078 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 CNGA2Q16280 664 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 WDR44Q5JSH3 913 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 SCARA3Q6AZY7 606 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 ANKS1BQ7Z6G8 1248 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 TRIM11Q96F44 468 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 CCDC114Q96M63 670 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 CTNNAL1Q9UBT7 734 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 HACL1Q9UJ83 578 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 AGO2Q9UKV8 859 aaKnown RBP20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 FOXO6A8MYZ6 492 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 CREB1P16220 341 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 NOMO3P69849 1222 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms