RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 OPTNQ96CV9 577 aa7.13□□□□□ -1.27
CDKAL1-202ENST00000378610 NR1H4Q96RI1 486 aaPredicted RBP7.13□□□□□ -1.27
CDKAL1-202ENST00000378610 EPB41L1Q9H4G0 881 aa7.13□□□□□ -1.27
CDKAL1-202ENST00000378610 EURLQ9NYK6 297 aa7.13□□□□□ -1.27
CDKAL1-202ENST00000378610 FNIP2Q9P278 1114 aa7.13□□□□□ -1.27
CDKAL1-202ENST00000378610 PACSIN2Q9UNF0 486 aaPredicted RBP7.13□□□□□ -1.27
CDKAL1-202ENST00000378610 TRIM33Q9UPN9 1127 aa7.13□□□□□ -1.27
CDKAL1-202ENST00000378610 ARFGEF1Q9Y6D6 1849 aa7.13□□□□□ -1.27
CDKAL1-202ENST00000378610 MEGF6O75095 1541 aa7.13□□□□□ -1.27
CDKAL1-202ENST00000378610 A0A087X0T9 212 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 KIAA0391O15091 583 aaKnown RBP7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 TP73O15350 636 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 DDX3YO15523 660 aaKnown RBP7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 TTI1O43156 1089 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 UPP2O95045 317 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 FAM228BP0C875 321 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 CCDC166P0CW27 439 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 MYL6BP14649 208 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 PRKCIP41743 596 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 SULT2A1Q06520 285 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 DHX34Q14147 1143 aaKnown RBP7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 RPS6KA1Q15418 735 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 IGF2-ASQ6U949 168 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 IRF2BP2Q7Z5L9 587 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 ALDH16A1Q8IZ83 802 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 KIF2BQ8N4N8 673 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 NKAPQ8N5F7 415 aaKnown RBP7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 ANKRD13CQ8N6S4 541 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 NRG4Q8WWG1 115 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 ZNF496Q96IT1 587 aaPredicted RBP7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 AK8Q96MA6 479 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 ERP44Q9BS26 406 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 ISCA1Q9BUE6 129 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 ZMYND12Q9H0C1 365 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 VCXQ9H320 206 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 TXLNGQ9NUQ3 528 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 NMRK1Q9NWW6 199 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 PDP2Q9P2J9 529 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 HSFX1Q9UBD0 423 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 ZNF232Q9UNY5 417 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 NCANO14594 1321 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 TAF1LQ8IZX4 1826 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 DDAH1O94760 285 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 TJP3O95049 919 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 ITGA4P13612 1032 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 MTIF2P46199 727 aaKnown RBP7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 RXRGP48443 463 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 EPHA4P54764 986 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 DEUP1Q05D60 604 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 PFKFB3Q16875 520 aaPredicted RBP7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 CTC1Q2NKJ3 1217 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 DCAF12L1Q5VU92 463 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 NELFCDQ8IXH7 590 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 CMTR1Q8N1G2 835 aaKnown RBP7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 GUF1Q8N442 669 aaKnown RBP7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 UCMAQ8WVF2 138 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 POF1BQ8WVV4 589 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 SLC35B4Q969S0 331 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 FGD4Q96M96 766 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 NDNQ99608 321 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 ARHGAP9Q9BRR9 750 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 SPATA16Q9BXB7 569 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 PACSIN1Q9BY11 444 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 TRIM7Q9C029 511 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 DDX47Q9H0S4 455 aaKnown RBP7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 STMN4Q9H169 189 aaPredicted RBP7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 AZI2Q9H6S1 392 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 DCLRE1BQ9H816 532 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 LUC7LQ9NQ29 371 aaKnown RBP7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 AMACRQ9UHK6 382 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 STARD13Q9Y3M8 1113 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 PCDHB11Q9Y5F2 797 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 ADGRA3Q8IWK6 1321 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 RIPK2O43353 540 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 STRNO43815 780 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 GNAT2P19087 354 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 HOXC13P31276 330 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 SLC18A1P54219 525 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 RAD23BP54727 409 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 TRIM28Q13263 835 aaKnown RBP7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 PDE1CQ14123 709 aaPredicted RBP7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 GRIN2CQ14957 1233 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 CNPY1Q3B7I2 92 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 UBAP2Q5T6F2 1119 aaKnown RBP7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 FAM180BQ6P0A1 224 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 RNF19BQ6ZMZ0 732 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 MFSD6Q6ZSS7 791 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 UNC13DQ70J99 1090 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 OTOP3Q7RTS5 596 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 LRRC43Q8N309 656 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 MAGEB18Q96M61 343 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 LGALS13Q9UHV8 139 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 ZBTB21Q9ULJ3 1066 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 UTP11Q9Y3A2 253 aaKnown RBP7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 COMMD3-BMI1R4GMX3 469 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 NHSQ6T4R5 1651 aa7.12□□□□□ -1.27
CDKAL1-202ENST00000378610 NUP98P52948 1817 aa7.11□□□□□ -1.27
CDKAL1-202ENST00000378610 DDX60LQ5H9U9 1706 aaKnown RBP7.11□□□□□ -1.27
CDKAL1-202ENST00000378610 PVALEFA0A1B0GWK0 134 aa7.11□□□□□ -1.27
CDKAL1-202ENST00000378610 MAGEA13PA6NCF6 341 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms