RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 STK17AQ9UEE5 414 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 SCOCQ9UIL1 159 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 TMCC3Q9ULS5 477 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 IGF2BP3O00425 579 aaKnown RBP eCLIP11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 HOXD10P28358 340 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 TKTP29401 623 aaKnown RBP11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 RCVRNP35243 200 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 RAD23BP54727 409 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 PTPROQ16827 1216 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 CACNA2D3Q8IZS8 1091 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 NPLOC4Q8TAT6 608 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 PSMB7Q99436 277 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 EMILIN3Q9NT22 766 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 GPRC5DQ9NZD1 345 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 COL11A1P12107 1806 aaPredicted RBP11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 CFAP69A5D8W1 941 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 ZBTB11O95625 1053 aaPredicted RBP11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 NR3C2P08235 984 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 BACE1P56817 501 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 RNASE9P60153 205 aaKnown RBP11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 MRPS35P82673 323 aaKnown RBP11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 TYW1BQ6NUM6 668 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 ZBTB33Q86T24 672 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 TREML1Q86YW5 311 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 PPM1KQ8N3J5 372 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 GOLM1Q8NBJ4 401 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 FLCNQ8NFG4 579 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 CNOT6LQ96LI5 555 aaKnown RBP11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 LSM14BQ9BX40 385 aaKnown RBP11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 PARVGQ9HBI0 331 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 SCHIP1Q9P0W5 487 aaPredicted RBP11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 HESX1Q9UBX0 185 aa11.48□□□□□ -0.57
PCDHGA1-201ENST00000378105 TRIM49BA6NDI0 452 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 VDRP11473 427 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 ERFP50548 548 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 DGKZQ13574 1117 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 METTL21CQ5VZV1 264 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 CHADLQ6NUI6 762 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 CYFIP1Q7L576 1253 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 TMEM151BQ8IW70 566 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 MSANTD4Q8NCY6 345 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 SUN5Q8TC36 379 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 HDAC7Q8WUI4 952 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 GBA2Q9HCG7 927 aaPredicted RBP11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 HPS4Q9NQG7 708 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 PCDHGA8Q9Y5G5 932 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 WDR64B1ANS9 1081 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 NCK2O43639 380 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 CYTH3O43739 400 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 KRT86O43790 486 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 MSL3P1P0C860 447 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 CES1P23141 567 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 XRCC4Q13426 336 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 SH2D4BQ5SQS7 431 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 SPECC1LQ69YQ0 1117 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 FAM83AQ86UY5 434 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 FMR1NBQ8N0W7 255 aaPredicted RBP11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 SLC35F6Q8N357 371 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 LILRB1Q8NHL6 650 aaPredicted RBP11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 GSDMBQ8TAX9 411 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 DPF2Q92785 391 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 ADPGKQ9BRR6 497 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 WDR6Q9NNW5 1121 aaKnown RBP11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 ASTN2O75129 1339 aaPredicted RBP11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 DOCK1Q14185 1865 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 TNFAIP3P21580 790 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 ETFBP38117 255 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 AARSP49588 968 aaKnown RBP eCLIP11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 ALDH5A1P51649 535 aaPredicted RBP11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 ATP2C1P98194 919 aaPredicted RBP11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 RCN2Q14257 317 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 CHCHD4Q8N4Q1 142 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 NLRP7Q8WX94 980 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 ERP27Q96DN0 273 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 SEC16BQ96JE7 1060 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 LXNQ9BS40 222 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 TUBGCP2Q9BSJ2 902 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 IDI2Q9BXS1 227 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 CUEDC2Q9H467 287 aa11.47□□□□□ -0.57
PCDHGA1-201ENST00000378105 PGK2P07205 417 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 CCDC166P0CW27 439 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 KLHL30Q0D2K2 578 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 MUM1Q2TAK8 710 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 IGSF11Q5DX21 431 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 PPP1R18Q6NYC8 613 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 DLK2Q6UY11 383 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 RUFY4Q6ZNE9 571 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 PLPP6Q8IY26 295 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 GDAP1Q8TB36 358 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 P2RX5Q93086 422 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 TAAR1Q96RJ0 339 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 SH3GL2Q99962 352 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 TRPM7Q96QT4 1865 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 PDS5AQ29RF7 1337 aaKnown RBP11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 NOTOA8MTQ0 251 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 MGEA5O60502 916 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 HIP1RO75146 1068 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 MYL3P08590 195 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 TFPTP0C1Z6 253 aa11.46□□□□□ -0.57
PCDHGA1-201ENST00000378105 TXNP10599 105 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms