RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	CP	P00450	1065 aa		12.52	□□□□□ -0.4
LMO7-204	ENST00000377499	TPP2	P29144	1249 aa	Predicted RBP	12.52	□□□□□ -0.4
LMO7-204	ENST00000377499	SP3	Q02447	781 aa		12.52	□□□□□ -0.4
LMO7-204	ENST00000377499	CRYM	Q14894	314 aa		12.52	□□□□□ -0.4
LMO7-204	ENST00000377499	GLYCTK	Q8IVS8	523 aa		12.52	□□□□□ -0.4
LMO7-204	ENST00000377499	MSL3	Q8N5Y2	521 aa	Known RBP	12.52	□□□□□ -0.4
LMO7-204	ENST00000377499	ALS2CR12	Q96Q35	445 aa		12.52	□□□□□ -0.4
LMO7-204	ENST00000377499	YIPF2	Q9BWQ6	316 aa		12.52	□□□□□ -0.4
LMO7-204	ENST00000377499	PARD6B	Q9BYG5	372 aa		12.52	□□□□□ -0.4
LMO7-204	ENST00000377499	TSGA10	Q9BZW7	698 aa		12.52	□□□□□ -0.4
LMO7-204	ENST00000377499	MINDY3	Q9H8M7	445 aa		12.52	□□□□□ -0.4
LMO7-204	ENST00000377499	LMCD1	Q9NZU5	365 aa		12.52	□□□□□ -0.4
LMO7-204	ENST00000377499	BZW2	Q9Y6E2	419 aa	Known RBP	12.52	□□□□□ -0.4
LMO7-204	ENST00000377499	RBM47	A0AV96	593 aa	Known RBP	12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	MOCS3	O95396	460 aa		12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	SMIM10L2A	P0DMW4	78 aa		12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	SMIM10L2B	P0DMW5	78 aa		12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	LACTB	P83111	547 aa	Predicted RBP	12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	LMBR1	Q8WVP7	490 aa		12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	NAPG	Q99747	312 aa	Predicted RBP	12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	RPF1	Q9H9Y2	349 aa	Known RBP	12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	CENPF	P49454	3210 aa		12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	LOXHD1	Q8IVV2	1947 aa		12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	RBAK-RBAKDN	I3L0D1	243 aa		12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	EDN1	P05305	212 aa		12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	FAM163B	P0C2L3	166 aa		12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	PYGB	P11216	843 aa		12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	RNF187	Q5TA31	235 aa	Predicted RBP	12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	EEF1DP3	Q658K8	133 aa		12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	ALKBH5	Q6P6C2	394 aa	Known RBP	12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	CXCL17	Q6UXB2	119 aa		12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	DNAJB3	Q8WWF6	145 aa		12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	CAPZA3	Q96KX2	299 aa		12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	OSMR	Q99650	979 aa		12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	ACO2	Q99798	780 aa	Known RBP	12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	FUT8	Q9BYC5	575 aa		12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	SIX2	Q9NPC8	291 aa		12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	PRMT7	Q9NVM4	692 aa	Predicted RBP	12.52	□□□□□ -0.41
LMO7-204	ENST00000377499	ANKRD33B	A6NCL7	494 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	RCCD1	A6NED2	376 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	RRN3P2	A6NIE6	340 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499		F8VZ95	297 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	ACKR2	O00590	384 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	CHUK	O15111	745 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	OGT	O15294	1046 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	PPFIA2	O75334	1257 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	ZNF865	P0CJ78	1059 aa	Predicted RBP	12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	RARB	P10826	455 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	CA8	P35219	290 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	TM4SF4	P48230	202 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	PSEN2	P49810	448 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	PTEN	P60484	403 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	CEP85L	Q5SZL2	805 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	SPOPL	Q6IQ16	392 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	ZPBP2	Q6X784	338 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	ZNF571	Q7Z3V5	609 aa	Predicted RBP	12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	RAET1E	Q8TD07	263 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	TMC2	Q8TDI7	906 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	SEMA4D	Q92854	862 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	KCND1	Q9NSA2	647 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499		A0A0B4J269	797 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	SSU72P8	A0A1W2PR75	194 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	CYP26A1	O43174	497 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	MSC	O60682	206 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	HLA-DRA	P01903	254 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	SCNN1B	P51168	640 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	CDR1	P51861	262 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	ZNF200	P98182	395 aa	Predicted RBP	12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	CDK17	Q00537	523 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	PPARD	Q03181	441 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	MPZL3	Q6UWV2	235 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	SYN2	Q92777	582 aa	Predicted RBP	12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	MFSD14A	Q96MC6	490 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	AIPL1	Q9NZN9	384 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	NOD1	Q9Y239	953 aa		12.51	□□□□□ -0.41
LMO7-204	ENST00000377499	ZNF263	O14978	683 aa		12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	KIAA0391	O15091	583 aa	Known RBP	12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	KIAA0754	O94854	1291 aa		12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	FECH	P22830	423 aa		12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	HNRNPH3	P31942	346 aa	Known RBP	12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	GPC3	P51654	580 aa		12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	GRIK3	Q13003	919 aa		12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	SLC18A3	Q16572	532 aa		12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	HGSNAT	Q68CP4	663 aa		12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	DHX38	Q92620	1227 aa	Known RBP	12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	GCOM2	Q9BZD3	368 aa	Predicted RBP	12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	NXF1	Q9UBU9	619 aa	Known RBP	12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	GJD2	Q9UKL4	321 aa		12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	PLXNB2	O15031	1838 aa		12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	P4HA2	O15460	535 aa		12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	TNNC2	P02585	160 aa		12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	CD58	P19256	250 aa		12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	CTGF	P29279	349 aa		12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	TRIM32	Q13049	653 aa		12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	SCARA5	Q6ZMJ2	495 aa		12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	EMID1	Q96A84	441 aa	Predicted RBP	12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	MTMR12	Q9C0I1	747 aa		12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	HAPLN2	Q9GZV7	340 aa		12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	FAM107B	Q9H098	131 aa		12.5	□□□□□ -0.41
LMO7-204	ENST00000377499	ACP6	Q9NPH0	428 aa		12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms