RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 EHBP1Q8NDI1 1231 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 NEK11Q8NG66 645 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 CPLX3Q8WVH0 158 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 SEMA4DQ92854 862 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 LBHD1Q9BQE6 289 aaPredicted RBP13.97□□□□□ -0.17
CBWD3-203ENST00000377344 ELAC1Q9H777 363 aaKnown RBP13.97□□□□□ -0.17
CBWD3-203ENST00000377344 RNF216Q9NWF9 866 aaPredicted RBP13.97□□□□□ -0.17
CBWD3-203ENST00000377344 TUBGCP4Q9UGJ1 667 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 UBQLN1Q9UMX0 589 aaKnown RBP13.97□□□□□ -0.17
CBWD3-203ENST00000377344 PLAGL2Q9UPG8 496 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 TRIP11Q15643 1979 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 ZBBXA8MT70 800 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 PMM2O15305 246 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 OFD1O75665 1012 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 VNN1O95497 513 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 FGBP02675 491 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 NCOA4Q13772 614 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 PPFIBP1Q86W92 1011 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 GSTCDQ8NEC7 633 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 ELMO3Q96BJ8 720 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 TSPAN18Q96SJ8 248 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 PI4K2AQ9BTU6 479 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 IMPG2Q9BZV3 1241 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 GOLGA2P5Q9HBQ8 144 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 MIOSQ9NXC5 875 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 ITGA11Q9UKX5 1188 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 COQ4Q9Y3A0 265 aa13.97□□□□□ -0.17
CBWD3-203ENST00000377344 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.97□□□□□ -0.17
CBWD3-203ENST00000377344 ITIH6Q6UXX5 1313 aa13.96□□□□□ -0.17
CBWD3-203ENST00000377344 GOLGA6L6A8MZA4 724 aa13.96□□□□□ -0.17
CBWD3-203ENST00000377344 CST3P01034 146 aaPredicted RBP13.96□□□□□ -0.17
CBWD3-203ENST00000377344 AMHP03971 560 aa13.96□□□□□ -0.17
CBWD3-203ENST00000377344 TPM1P09493 284 aa13.96□□□□□ -0.17
CBWD3-203ENST00000377344 KCNJ6P48051 423 aa13.96□□□□□ -0.17
CBWD3-203ENST00000377344 CCDC173Q0VFZ6 552 aa13.96□□□□□ -0.17
CBWD3-203ENST00000377344 ZBTB6Q15916 424 aa13.96□□□□□ -0.17
CBWD3-203ENST00000377344 WDR44Q5JSH3 913 aa13.96□□□□□ -0.17
CBWD3-203ENST00000377344 CLLU1OSQ5K130 101 aa13.96□□□□□ -0.17
CBWD3-203ENST00000377344 SCARA3Q6AZY7 606 aa13.96□□□□□ -0.17
CBWD3-203ENST00000377344 ZNF365Q70YC5 407 aa13.96□□□□□ -0.17
CBWD3-203ENST00000377344 NPAS4Q8IUM7 802 aa13.96□□□□□ -0.17
CBWD3-203ENST00000377344 CCDC150Q8NCX0 1101 aa13.96□□□□□ -0.17
CBWD3-203ENST00000377344 URGCPQ8TCY9 931 aa13.96□□□□□ -0.17
CBWD3-203ENST00000377344 PPP1R10Q96QC0 940 aaKnown RBP13.96□□□□□ -0.17
CBWD3-203ENST00000377344 SLC38A7Q9NVC3 462 aa13.96□□□□□ -0.17
CBWD3-203ENST00000377344 AGAP1Q9UPQ3 857 aa13.96□□□□□ -0.17
CBWD3-203ENST00000377344 MICAL3Q7RTP6 2002 aa13.95□□□□□ -0.18
CBWD3-203ENST00000377344 EPHB6O15197 1021 aa13.95□□□□□ -0.18
CBWD3-203ENST00000377344 HOXA2O43364 376 aa13.95□□□□□ -0.18
CBWD3-203ENST00000377344 EFCAB14O75071 495 aa13.95□□□□□ -0.18
CBWD3-203ENST00000377344 POLR2BP30876 1174 aaKnown RBP13.95□□□□□ -0.18
CBWD3-203ENST00000377344 MYL6P60660 151 aa13.95□□□□□ -0.18
CBWD3-203ENST00000377344 WDR5P61964 334 aaKnown RBP13.95□□□□□ -0.18
CBWD3-203ENST00000377344 RNASELQ05823 741 aaKnown RBP13.95□□□□□ -0.18
CBWD3-203ENST00000377344 NOMO2Q5JPE7 1267 aa13.95□□□□□ -0.18
CBWD3-203ENST00000377344 FAM117BQ6P1L5 589 aa13.95□□□□□ -0.18
CBWD3-203ENST00000377344 C16orf59Q7L2K0 433 aa13.95□□□□□ -0.18
CBWD3-203ENST00000377344 LMO3Q8TAP4 145 aa13.95□□□□□ -0.18
CBWD3-203ENST00000377344 NUP58Q9BVL2 599 aa13.95□□□□□ -0.18
CBWD3-203ENST00000377344 SIX4Q9UIU6 781 aa13.95□□□□□ -0.18
CBWD3-203ENST00000377344 NR2E3Q9Y5X4 410 aa13.95□□□□□ -0.18
CBWD3-203ENST00000377344 BAIAP3O94812 1187 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 PTMAP06454 111 aaKnown RBP13.94□□□□□ -0.18
CBWD3-203ENST00000377344 GATMP50440 423 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 EPHB4P54760 987 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 POLR2FP61218 127 aaKnown RBP13.94□□□□□ -0.18
CBWD3-203ENST00000377344 DEFB103AP81534 67 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 RBP5P82980 135 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 SOX4Q06945 474 aaPredicted RBP13.94□□□□□ -0.18
CBWD3-203ENST00000377344 GRIK3Q13003 919 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 ZNF699Q32M78 642 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 KLHDC7AQ5VTJ3 777 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 SPOPLQ6IQ16 392 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 GJB7Q6PEY0 223 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 CACNA2D4Q7Z3S7 1137 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 PPM1KQ8N3J5 372 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 NT5C1BQ96P26 610 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 NLRC4Q9NPP4 1024 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 PLCB1Q9NQ66 1216 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 LTBP2Q14767 1821 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 PDCD11Q14690 1871 aaKnown RBP13.94□□□□□ -0.18
CBWD3-203ENST00000377344 CASTOR2A6NHX0 329 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 GYPCP04921 128 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 CYP3A5P20815 502 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 CASP14P31944 242 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 RAPGEF1Q13905 1077 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 TRIM14Q14142 442 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 SGSM1Q2NKQ1 1148 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 PHLDB3Q6NSJ2 640 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 PSRC1Q6PGN9 363 aaPredicted RBP13.94□□□□□ -0.18
CBWD3-203ENST00000377344 RRAGAQ7L523 313 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 TMCO2Q7Z6W1 182 aaPredicted RBP13.94□□□□□ -0.18
CBWD3-203ENST00000377344 PDLIM2Q96JY6 352 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 FAM193BQ96PV7 902 aaPredicted RBP13.94□□□□□ -0.18
CBWD3-203ENST00000377344 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.94□□□□□ -0.18
CBWD3-203ENST00000377344 SIX2Q9NPC8 291 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 UBE2TQ9NPD8 197 aaPredicted RBP13.94□□□□□ -0.18
CBWD3-203ENST00000377344 KANSL3Q9P2N6 904 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 IMPACTQ9P2X3 320 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 CACNG4Q9UBN1 327 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms