RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 PALMO75781 387 aa16.48■□□□□ 0.23
FXN-201ENST00000377270 ASMTLO95671 621 aa16.48■□□□□ 0.23
FXN-201ENST00000377270 CFBP00751 764 aa16.48■□□□□ 0.23
FXN-201ENST00000377270 SERPINB3P29508 390 aa16.48■□□□□ 0.23
FXN-201ENST00000377270 CASP5P51878 434 aa16.48■□□□□ 0.23
FXN-201ENST00000377270 RNASE9P60153 205 aaKnown RBP16.48■□□□□ 0.23
FXN-201ENST00000377270 COPS2P61201 443 aa16.48■□□□□ 0.23
FXN-201ENST00000377270 FAM83BQ5T0W9 1011 aa16.48■□□□□ 0.23
FXN-201ENST00000377270 CASP10Q92851 521 aa16.48■□□□□ 0.23
FXN-201ENST00000377270 IFT74Q96LB3 600 aa16.48■□□□□ 0.23
FXN-201ENST00000377270 REEP2Q9BRK0 252 aa16.48■□□□□ 0.23
FXN-201ENST00000377270 EDEM3Q9BZQ6 932 aa16.48■□□□□ 0.23
FXN-201ENST00000377270 TPK1Q9H3S4 243 aa16.48■□□□□ 0.23
FXN-201ENST00000377270 TUT1Q9H6E5 874 aaKnown RBP16.48■□□□□ 0.23
FXN-201ENST00000377270 TMEM59LQ9UK28 342 aa16.48■□□□□ 0.23
FXN-201ENST00000377270 DLGAP5Q15398 846 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 RSBN1LQ6PCB5 846 aaPredicted RBP16.47■□□□□ 0.23
FXN-201ENST00000377270 CCDC174Q6PII3 467 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 TRIM59Q8IWR1 403 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 TTC30BQ8N4P2 665 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 FAM133AQ8N9E0 248 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 TLCD1Q96CP7 247 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 ZNF333Q96JL9 665 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 TUBGCP5Q96RT8 1024 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 LSM14BQ9BX40 385 aaKnown RBP16.47■□□□□ 0.23
FXN-201ENST00000377270 CYP39A1Q9NYL5 469 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 ZNF70Q9UC06 446 aaPredicted RBP16.47■□□□□ 0.23
FXN-201ENST00000377270 PNMA2Q9UL42 364 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 A0A1W2PQ67 120 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 OXSR1O95747 527 aaPredicted RBP16.47■□□□□ 0.23
FXN-201ENST00000377270 FTCDO95954 541 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 GFPT1Q06210 699 aaPredicted RBP16.47■□□□□ 0.23
FXN-201ENST00000377270 CCDC153Q494R4 210 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 SPATA24Q86W54 205 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 SFR1Q86XK3 245 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 MPP4Q96JB8 637 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 ELAC2Q9BQ52 826 aaKnown RBP16.47■□□□□ 0.23
FXN-201ENST00000377270 DDX23Q9BUQ8 820 aaKnown RBP16.47■□□□□ 0.23
FXN-201ENST00000377270 NDEL1Q9GZM8 345 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 BHMT2Q9H2M3 363 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 EURLQ9NYK6 297 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 VAV3Q9UKW4 847 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 USP20Q9Y2K6 914 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 TMX2Q9Y320 296 aa16.47■□□□□ 0.23
FXN-201ENST00000377270 FAM32AQ9Y421 112 aaKnown RBP16.47■□□□□ 0.23
FXN-201ENST00000377270 PIK3CDO00329 1044 aa16.46■□□□□ 0.23
FXN-201ENST00000377270 NVLO15381 856 aaKnown RBP16.46■□□□□ 0.23
FXN-201ENST00000377270 NOL4O94818 638 aa16.46■□□□□ 0.23
FXN-201ENST00000377270 CYP3A4P08684 503 aa16.46■□□□□ 0.23
FXN-201ENST00000377270 MARSP56192 900 aaKnown RBP16.46■□□□□ 0.23
FXN-201ENST00000377270 ASTE1Q2TB18 679 aaPredicted RBP16.46■□□□□ 0.23
FXN-201ENST00000377270 LIN52Q52LA3 116 aa16.46■□□□□ 0.23
FXN-201ENST00000377270 MEI1Q5TIA1 1274 aa16.46■□□□□ 0.23
FXN-201ENST00000377270 DAB2IPQ5VWQ8 1189 aa16.46■□□□□ 0.23
FXN-201ENST00000377270 TMEM214Q6NUQ4 689 aaKnown RBP16.46■□□□□ 0.23
FXN-201ENST00000377270 SLC30A10Q6XR72 485 aa16.46■□□□□ 0.23
FXN-201ENST00000377270 MAMSTRQ6ZN01 415 aa16.46■□□□□ 0.23
FXN-201ENST00000377270 DDX42Q86XP3 938 aaKnown RBP eCLIP16.46■□□□□ 0.23
FXN-201ENST00000377270 ANKRD13BQ86YJ7 626 aa16.46■□□□□ 0.23
FXN-201ENST00000377270 FAM151AQ8WW52 585 aa16.46■□□□□ 0.23
FXN-201ENST00000377270 GATA6Q92908 595 aa16.46■□□□□ 0.23
FXN-201ENST00000377270 DNAJC1Q96KC8 554 aaKnown RBP16.46■□□□□ 0.23
FXN-201ENST00000377270 EIF2AK1Q9BQI3 630 aaKnown RBP16.46■□□□□ 0.23
FXN-201ENST00000377270 NEUROG2Q9H2A3 272 aa16.46■□□□□ 0.23
FXN-201ENST00000377270 GINM1Q9NU53 330 aa16.46■□□□□ 0.23
FXN-201ENST00000377270 CEP72Q9P209 647 aa16.46■□□□□ 0.23
FXN-201ENST00000377270 SMCHD1A6NHR9 2005 aa16.46■□□□□ 0.23
FXN-201ENST00000377270 EML1O00423 815 aa16.46■□□□□ 0.22
FXN-201ENST00000377270 MGEA5O60502 916 aa16.46■□□□□ 0.22
FXN-201ENST00000377270 BDNFP23560 247 aa16.46■□□□□ 0.22
FXN-201ENST00000377270 NR2F2P24468 414 aa16.46■□□□□ 0.22
FXN-201ENST00000377270 POLR2FP61218 127 aaKnown RBP16.46■□□□□ 0.22
FXN-201ENST00000377270 TBL3Q12788 808 aaKnown RBP16.46■□□□□ 0.22
FXN-201ENST00000377270 ZYXQ15942 572 aaKnown RBP16.46■□□□□ 0.22
FXN-201ENST00000377270 SEPT7Q16181 437 aaKnown RBP16.46■□□□□ 0.22
FXN-201ENST00000377270 EDRF1Q3B7T1 1238 aa16.46■□□□□ 0.22
FXN-201ENST00000377270 TDRD12Q587J7 1177 aaKnown RBP16.46■□□□□ 0.22
FXN-201ENST00000377270 PPP4R3CPQ6ZMV5 832 aa16.46■□□□□ 0.22
FXN-201ENST00000377270 NEK10Q6ZWH5 1172 aa16.46■□□□□ 0.22
FXN-201ENST00000377270 RSPH3Q86UC2 560 aa16.46■□□□□ 0.22
FXN-201ENST00000377270 ZC3H18Q86VM9 953 aaKnown RBP16.46■□□□□ 0.22
FXN-201ENST00000377270 TREML1Q86YW5 311 aa16.46■□□□□ 0.22
FXN-201ENST00000377270 DDX50Q9BQ39 737 aaKnown RBP16.46■□□□□ 0.22
FXN-201ENST00000377270 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.46■□□□□ 0.221e-6■■■■□ 25.4
FXN-201ENST00000377270 NMRK1Q9NWW6 199 aa16.46■□□□□ 0.22
FXN-201ENST00000377270 TMA7Q9Y2S6 64 aaKnown RBP16.46■□□□□ 0.22
FXN-201ENST00000377270 SERPINB7O75635 380 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 SHBGP04278 402 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 COL6A2P12110 1019 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 RXRBP28702 533 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 EPS15P42566 896 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 MYO1HQ8N1T3 1032 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.45■□□□□ 0.22
FXN-201ENST00000377270 HDAC9Q9UKV0 1011 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 FADS3Q9Y5Q0 445 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 COL2A1P02458 1487 aaPredicted RBP16.45■□□□□ 0.22
FXN-201ENST00000377270 A6NJR5 290 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 RSPH10B2B2RC85 870 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 BHMG1C9JSJ3 638 aaPredicted RBP16.45■□□□□ 0.22
FXN-201ENST00000377270 H0Y3Z8 333 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms