RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 CCT8L2Q96SF2 557 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 EFCC1Q9HA90 598 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 PTPRHQ9HD43 1115 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 BTBD7Q9P203 1132 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 TRIP11Q15643 1979 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 SOWAHBA6NEL2 793 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 IRF6O14896 467 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 MSCO60682 206 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 TCEA3O75764 348 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 OATP04181 439 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 GCAP28676 217 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 MAN1A1P33908 653 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 PTPN7P35236 360 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 NAMPTP43490 491 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 PMS2P54278 862 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 HMGCS2P54868 508 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 CAPSQ13938 189 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 DNAJC21Q5F1R6 531 aaKnown RBP10.27□□□□□ -0.77
TRIM39-202ENST00000376659 TREML2Q5T2D2 321 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 PPM1KQ8N3J5 372 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 CGRRF1Q99675 332 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 TMEM134Q9H6X4 195 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 RSPH14Q9UHP6 348 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 EVPLQ92817 2033 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 C19orf81C9J6K1 198 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 ANKRD65E5RJM6 399 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 MYZAPP0CAP1 466 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 CHKAP35790 457 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 PDE6CP51160 858 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 EIF3BP55884 814 aaKnown RBP10.26□□□□□ -0.77
TRIM39-202ENST00000376659 DRP2Q13474 957 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 DALRD3Q5D0E6 543 aaKnown RBP10.26□□□□□ -0.77
TRIM39-202ENST00000376659 DAB2IPQ5VWQ8 1189 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 SPOPLQ6IQ16 392 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 ADAT2Q7Z6V5 191 aaKnown RBP10.26□□□□□ -0.77
TRIM39-202ENST00000376659 RAPGEF5Q92565 580 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 ATP6V0A1Q93050 837 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 CYFIP2Q96F07 1278 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 ZBTB45Q96K62 511 aaPredicted RBP10.26□□□□□ -0.77
TRIM39-202ENST00000376659 CEP170P1Q96L14 293 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 NT5C1BQ96P26 610 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 SEMA4AQ9H3S1 761 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 CHST7Q9NS84 486 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 WHRNQ9P202 907 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 CTTNBP2NLQ9P2B4 639 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 DDX20Q9UHI6 824 aaKnown RBP10.26□□□□□ -0.77
TRIM39-202ENST00000376659 NUB1Q9Y5A7 615 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 PEX10O60683 326 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 UBA1P22314 1058 aaKnown RBP10.26□□□□□ -0.77
TRIM39-202ENST00000376659 RRM1P23921 792 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 TMOD1P28289 359 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 GSCP56915 257 aaPredicted RBP10.26□□□□□ -0.77
TRIM39-202ENST00000376659 TAS2R40P59535 323 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 ADCY2Q08462 1091 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 MAMLD1Q13495 774 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 MESDQ14696 234 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 WDTC1Q8N5D0 677 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 UBL4BQ8N7F7 174 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 OR5B17Q8NGF7 314 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 ZNF653Q96CK0 615 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 FAM213AQ9BRX8 229 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 TEX13BQ9BXU2 312 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 DCLK3Q9C098 648 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 ACAD9Q9H845 621 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 SAMM50Q9Y512 469 aa10.26□□□□□ -0.77
TRIM39-202ENST00000376659 LGR5O75473 907 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 USP2O75604 605 aaPredicted RBP10.25□□□□□ -0.77
TRIM39-202ENST00000376659 HLA-DRAP01903 254 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 MYBL1P10243 752 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 TCF4P15884 667 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 ALDH5A1P51649 535 aaPredicted RBP10.25□□□□□ -0.77
TRIM39-202ENST00000376659 TAZQ16635 292 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 XKR3Q5GH77 459 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 KATNAL2Q8IYT4 538 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 CITO14578 2027 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 TRPM7Q96QT4 1865 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 PODXLO00592 558 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 CLTAP09496 248 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 DLATP10515 647 aaKnown RBP10.25□□□□□ -0.77
TRIM39-202ENST00000376659 CETPP11597 493 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 RARGP13631 454 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 AUHQ13825 339 aaKnown RBP10.25□□□□□ -0.77
TRIM39-202ENST00000376659 TADA2BQ86TJ2 420 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 NLRX1Q86UT6 975 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 EGFL6Q8IUX8 553 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 WRNIP1Q96S55 665 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 MYCBPQ99417 103 aaPredicted RBP10.25□□□□□ -0.77
TRIM39-202ENST00000376659 RASSF4Q9H2L5 321 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.25□□□□□ -0.77
TRIM39-202ENST00000376659 SNX24Q9Y343 169 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 PCDHB2Q9Y5E7 798 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 PPP2R3BQ9Y5P8 575 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 PATJQ8NI35 1801 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 CLDN3O15551 220 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 PROSCO94903 275 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 ABCD1P33897 745 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 OGDHQ02218 1023 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 CNTN2Q02246 1040 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 CBLBQ13191 982 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 CUL2Q13617 745 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms