RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 PROSCO94903 275 aa11.38□□□□□ -0.59
ABCF1-202ENST00000376545 KCNA2P16389 499 aa11.38□□□□□ -0.59
ABCF1-202ENST00000376545 BPIFB4P59827 614 aa11.38□□□□□ -0.59
ABCF1-202ENST00000376545 ZACNQ401N2 412 aa11.38□□□□□ -0.59
ABCF1-202ENST00000376545 WLSQ5T9L3 541 aa11.38□□□□□ -0.59
ABCF1-202ENST00000376545 CPXCR1Q8N123 301 aa11.38□□□□□ -0.59
ABCF1-202ENST00000376545 ZKSCAN4Q969J2 545 aaPredicted RBP11.38□□□□□ -0.59
ABCF1-202ENST00000376545 TRAIPQ9BWF2 469 aa11.38□□□□□ -0.59
ABCF1-202ENST00000376545 KIAA1586Q9HCI6 787 aa11.38□□□□□ -0.59
ABCF1-202ENST00000376545 SNX3O60493 162 aa11.38□□□□□ -0.59
ABCF1-202ENST00000376545 RRM1P23921 792 aa11.38□□□□□ -0.59
ABCF1-202ENST00000376545 SLCO1A2P46721 670 aa11.38□□□□□ -0.59
ABCF1-202ENST00000376545 CCNG2Q16589 344 aa11.38□□□□□ -0.59
ABCF1-202ENST00000376545 CCDC142Q17RM4 750 aa11.38□□□□□ -0.59
ABCF1-202ENST00000376545 CCDC50Q8IVM0 306 aa11.38□□□□□ -0.59
ABCF1-202ENST00000376545 PARP9Q8IXQ6 854 aa11.38□□□□□ -0.59
ABCF1-202ENST00000376545 LARGE2Q8N3Y3 721 aa11.38□□□□□ -0.59
ABCF1-202ENST00000376545 MCPH1Q8NEM0 835 aa11.38□□□□□ -0.59
ABCF1-202ENST00000376545 HAUS2Q9NVX0 235 aa11.38□□□□□ -0.59
ABCF1-202ENST00000376545 GEMIN8Q9NWZ8 242 aaKnown RBP11.38□□□□□ -0.59
ABCF1-202ENST00000376545 DKC1O60832 514 aaKnown RBP eCLIP11.37□□□□□ -0.59
ABCF1-202ENST00000376545 DGAT1O75907 488 aa11.37□□□□□ -0.59
ABCF1-202ENST00000376545 RGS20O76081 388 aa11.37□□□□□ -0.59
ABCF1-202ENST00000376545 MYCLP12524 364 aaPredicted RBP11.37□□□□□ -0.59
ABCF1-202ENST00000376545 ITGA8P53708 1063 aa11.37□□□□□ -0.59
ABCF1-202ENST00000376545 LONRF1Q17RB8 773 aa11.37□□□□□ -0.59
ABCF1-202ENST00000376545 GALNTL6Q49A17 601 aa11.37□□□□□ -0.59
ABCF1-202ENST00000376545 TBC1D10BQ4KMP7 808 aaPredicted RBP11.37□□□□□ -0.59
ABCF1-202ENST00000376545 KATNAL2Q8IYT4 538 aa11.37□□□□□ -0.59
ABCF1-202ENST00000376545 REPS2Q8NFH8 660 aa11.37□□□□□ -0.59
ABCF1-202ENST00000376545 UHMK1Q8TAS1 419 aaKnown RBP11.37□□□□□ -0.59
ABCF1-202ENST00000376545 PI4K2AQ9BTU6 479 aa11.37□□□□□ -0.59
ABCF1-202ENST00000376545 PHIPQ8WWQ0 1821 aa11.37□□□□□ -0.59
ABCF1-202ENST00000376545 SMIM23A6NLE4 172 aa11.37□□□□□ -0.59
ABCF1-202ENST00000376545 PIGRP01833 764 aa11.37□□□□□ -0.59
ABCF1-202ENST00000376545 KLRC2P26717 231 aa11.37□□□□□ -0.59
ABCF1-202ENST00000376545 ATP5DP30049 168 aa11.37□□□□□ -0.59
ABCF1-202ENST00000376545 DGKZQ13574 1117 aa11.37□□□□□ -0.59
ABCF1-202ENST00000376545 NBPF9Q3BBW0 867 aa11.37□□□□□ -0.59
ABCF1-202ENST00000376545 ARHGEF16Q5VV41 709 aa11.37□□□□□ -0.59
ABCF1-202ENST00000376545 PLEKHA7Q6IQ23 1121 aa11.37□□□□□ -0.59
ABCF1-202ENST00000376545 PHF13Q86YI8 300 aaPredicted RBP11.37□□□□□ -0.59
ABCF1-202ENST00000376545 ELMO3Q96BJ8 720 aa11.37□□□□□ -0.59
ABCF1-202ENST00000376545 CEP170P1Q96L14 293 aa11.37□□□□□ -0.59
ABCF1-202ENST00000376545 GABBR1Q9UBS5 961 aa11.37□□□□□ -0.59
ABCF1-202ENST00000376545 R3HDM2Q9Y2K5 976 aaKnown RBP11.37□□□□□ -0.59
ABCF1-202ENST00000376545 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.37□□□□□ -0.59
ABCF1-202ENST00000376545 ACTL7BQ9Y614 415 aa11.37□□□□□ -0.59
ABCF1-202ENST00000376545 H0YCG3 227 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 VWA5AO00534 786 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 VNN1O95497 513 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 CALCAP01258 141 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 KRT5P13647 590 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 CCND2P30279 289 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 SOX10P56693 466 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 WNT7BP56706 349 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 CRELD2Q6UXH1 353 aaPredicted RBP11.36□□□□□ -0.59
ABCF1-202ENST00000376545 TRIM72Q6ZMU5 477 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 TRPM8Q7Z2W7 1104 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 CKAP2Q8WWK9 683 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 CPA5Q8WXQ8 436 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 ATG4AQ8WYN0 398 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 ARHGEF2Q92974 986 aaKnown RBP11.36□□□□□ -0.59
ABCF1-202ENST00000376545 ATP6V0A1Q93050 837 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 NSRP1Q9H0G5 558 aaKnown RBP11.36□□□□□ -0.59
ABCF1-202ENST00000376545 HOMER2Q9NSB8 354 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 C1orf112Q9NSG2 853 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 NINJ2Q9NZG7 142 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 SAMD15Q9P1V8 674 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 PRKAG3Q9UGI9 489 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 ZNRF3Q9ULT6 936 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 GAS8O95995 478 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 KCNA3P22001 575 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 NOMO3P69849 1222 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 SNX1Q13596 522 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 PREPLQ4J6C6 727 aaPredicted RBP11.36□□□□□ -0.59
ABCF1-202ENST00000376545 TDRD10Q5VZ19 366 aaKnown RBP11.36□□□□□ -0.59
ABCF1-202ENST00000376545 ABHD15Q6UXT9 468 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 RPAINQ86UA6 219 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 TTLL6Q8N841 843 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 ELAC2Q9BQ52 826 aaKnown RBP11.36□□□□□ -0.59
ABCF1-202ENST00000376545 FAM213AQ9BRX8 229 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 TACO1Q9BSH4 297 aaKnown RBP11.36□□□□□ -0.59
ABCF1-202ENST00000376545 CYP26B1Q9NR63 512 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 ASIC3Q9UHC3 531 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 ADAMTS5Q9UNA0 930 aa11.36□□□□□ -0.59
ABCF1-202ENST00000376545 MYH9P35579 1960 aaKnown RBP11.36□□□□□ -0.59
ABCF1-202ENST00000376545 TMEM120BA0PK00 339 aa11.35□□□□□ -0.59
ABCF1-202ENST00000376545 TESPA1A2RU30 521 aaPredicted RBP11.35□□□□□ -0.59
ABCF1-202ENST00000376545 HNRNPDLO14979 420 aaKnown RBP11.35□□□□□ -0.59
ABCF1-202ENST00000376545 ZBED4O75132 1171 aa11.35□□□□□ -0.59
ABCF1-202ENST00000376545 ACSL3O95573 720 aa11.35□□□□□ -0.59
ABCF1-202ENST00000376545 NR3C2P08235 984 aa11.35□□□□□ -0.59
ABCF1-202ENST00000376545 CREB1P16220 341 aa11.35□□□□□ -0.59
ABCF1-202ENST00000376545 DSG3P32926 999 aa11.35□□□□□ -0.59
ABCF1-202ENST00000376545 ELF3P78545 371 aaPredicted RBP11.35□□□□□ -0.59
ABCF1-202ENST00000376545 MAMLD1Q13495 774 aa11.35□□□□□ -0.59
ABCF1-202ENST00000376545 MPP2Q14168 576 aa11.35□□□□□ -0.59
ABCF1-202ENST00000376545 SNCBQ16143 134 aa11.35□□□□□ -0.59
ABCF1-202ENST00000376545 CCDC38Q502W7 563 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms