RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 FSD1LQ9BXM9 530 aa11.59□□□□□ -0.55
MDC1-201ENST00000376406 IRX2Q9BZI1 471 aaPredicted RBP11.59□□□□□ -0.55
MDC1-201ENST00000376406 SENP1Q9P0U3 644 aa11.59□□□□□ -0.55
MDC1-201ENST00000376406 IGSF9BQ9UPX0 1349 aa11.59□□□□□ -0.55
MDC1-201ENST00000376406 MYO9BQ13459 2157 aa11.59□□□□□ -0.55
MDC1-201ENST00000376406 H7C4K7 107 aa11.59□□□□□ -0.55
MDC1-201ENST00000376406 MEGF6O75095 1541 aa11.59□□□□□ -0.55
MDC1-201ENST00000376406 MDH1P40925 334 aaKnown RBP11.59□□□□□ -0.55
MDC1-201ENST00000376406 ACAD11Q709F0 780 aa11.59□□□□□ -0.55
MDC1-201ENST00000376406 SENP7Q9BQF6 1050 aa11.59□□□□□ -0.55
MDC1-201ENST00000376406 JMJD4Q9H9V9 463 aa11.59□□□□□ -0.55
MDC1-201ENST00000376406 MRPL40Q9NQ50 206 aaKnown RBP11.59□□□□□ -0.55
MDC1-201ENST00000376406 WDR35Q9P2L0 1181 aa11.59□□□□□ -0.55
MDC1-201ENST00000376406 TRIM10Q9UDY6 481 aa11.59□□□□□ -0.55
MDC1-201ENST00000376406 GNGT2O14610 69 aa11.59□□□□□ -0.55
MDC1-201ENST00000376406 TGFB3P10600 412 aa11.59□□□□□ -0.55
MDC1-201ENST00000376406 ARSEP51690 589 aa11.59□□□□□ -0.55
MDC1-201ENST00000376406 BAATQ14032 418 aaPredicted RBP11.59□□□□□ -0.55
MDC1-201ENST00000376406 AGBL2Q5U5Z8 902 aa11.59□□□□□ -0.55
MDC1-201ENST00000376406 RPAINQ86UA6 219 aa11.59□□□□□ -0.55
MDC1-201ENST00000376406 CD302Q8IX05 232 aa11.59□□□□□ -0.55
MDC1-201ENST00000376406 FGFR4P22455 802 aa11.59□□□□□ -0.55
MDC1-201ENST00000376406 CYFIP1Q7L576 1253 aa11.59□□□□□ -0.55
MDC1-201ENST00000376406 PPARGC1AQ9UBK2 798 aaKnown RBP11.59□□□□□ -0.55
MDC1-201ENST00000376406 INTUQ9ULD6 942 aa11.59□□□□□ -0.55
MDC1-201ENST00000376406 P4HA2O15460 535 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 ITGA4P13612 1032 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 CYP2C19P33261 490 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 KLK7P49862 253 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 TMEM132DQ14C87 1099 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 EFHC2Q5JST6 749 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 PRMT1Q99873 361 aaKnown RBP11.58□□□□□ -0.56
MDC1-201ENST00000376406 PRKCBP05771 671 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 ACADSBP45954 432 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 ALDH1A3P47895 512 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 GALCP54803 685 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 ESRRGP62508 458 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 BYSLQ13895 437 aaKnown RBP11.58□□□□□ -0.56
MDC1-201ENST00000376406 FBXL16Q8N461 479 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 ZCCHC17Q9NP64 241 aaKnown RBP11.58□□□□□ -0.56
MDC1-201ENST00000376406 TMCC1O94876 653 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 ST8SIA6P61647 398 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 AMPD2Q01433 879 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 SNRNP35Q16560 246 aaKnown RBP11.58□□□□□ -0.56
MDC1-201ENST00000376406 HIF1AQ16665 826 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 ZNF484Q5JVG2 852 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 TRIM67Q6ZTA4 783 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 PARP9Q8IXQ6 854 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 RNF149Q8NC42 400 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 DNERQ8NFT8 737 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 MMTAG2Q9BU76 263 aaKnown RBP11.58□□□□□ -0.56
MDC1-201ENST00000376406 CHUKO15111 745 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 CAP2P40123 477 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 FAM47EQ6ZV65 393 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 MKNK1Q9BUB5 465 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 POLR3CQ9BUI4 534 aaPredicted RBP11.58□□□□□ -0.56
MDC1-201ENST00000376406 COLEC11Q9BWP8 271 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 C17orf102A2RUQ5 167 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 ITIH2P19823 946 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 HSD17B4P51659 736 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 FAM102AQ5T9C2 384 aaPredicted RBP11.58□□□□□ -0.56
MDC1-201ENST00000376406 SCG3Q8WXD2 468 aaKnown RBP11.58□□□□□ -0.56
MDC1-201ENST00000376406 MOV10L1Q9BXT6 1211 aaKnown RBP11.58□□□□□ -0.56
MDC1-201ENST00000376406 ZBTB12Q9Y330 459 aaPredicted RBP11.58□□□□□ -0.56
MDC1-201ENST00000376406 DLG5Q8TDM6 1919 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 RPA1P27694 616 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 MMGT1Q8N4V1 131 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 SPDYE1Q8NFV5 336 aaPredicted RBP11.58□□□□□ -0.56
MDC1-201ENST00000376406 UPF3AQ9H1J1 476 aaKnown RBP11.58□□□□□ -0.56
MDC1-201ENST00000376406 FAM217BQ9NTX9 383 aaPredicted RBP11.58□□□□□ -0.56
MDC1-201ENST00000376406 HPSEQ9Y251 543 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 BCL9O00512 1426 aa11.58□□□□□ -0.56
MDC1-201ENST00000376406 PPP1R12AO14974 1030 aaPredicted RBP11.57□□□□□ -0.56
MDC1-201ENST00000376406 CDR2Q01850 454 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 AP1B1Q10567 949 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 BTBD8Q5XKL5 378 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 USP49Q70CQ1 688 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 DCP1BQ8IZD4 617 aaKnown RBP11.57□□□□□ -0.56
MDC1-201ENST00000376406 EPAS1Q99814 870 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 PPCSQ9HAB8 311 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 PRRG1O14668 218 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 PEX19P40855 299 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 GUCY1A3Q02108 690 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 ST13P4Q8IZP2 240 aaPredicted RBP11.57□□□□□ -0.56
MDC1-201ENST00000376406 DNAJC7Q99615 494 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 FAM129AQ9BZQ8 928 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 PCSK1NQ9UHG2 260 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 FAF1Q9UNN5 650 aaPredicted RBP11.57□□□□□ -0.56
MDC1-201ENST00000376406 H3BRJ5 948 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 EIF3HO15372 352 aaKnown RBP eCLIP11.57□□□□□ -0.561e-6■■□□□ 12.1
MDC1-201ENST00000376406 DYNC1LI2O43237 492 aaPredicted RBP11.57□□□□□ -0.56
MDC1-201ENST00000376406 HNRNPLLQ8WVV9 542 aaKnown RBP11.57□□□□□ -0.56
MDC1-201ENST00000376406 MXRA8Q9BRK3 442 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 RBM12Q9NTZ6 932 aaKnown RBP11.57□□□□□ -0.56
MDC1-201ENST00000376406 SPATS2LQ9NUQ6 558 aaKnown RBP11.57□□□□□ -0.56
MDC1-201ENST00000376406 PSD3Q9NYI0 1048 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.57□□□□□ -0.56
MDC1-201ENST00000376406 CREB3O43889 395 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 FKBP1BP68106 108 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 PIGHQ14442 188 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms