RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 ARMCX5Q6P1M9 558 aa17.36■□□□□ 0.37
C11orf88-202ENST00000375618 PRSS55Q6UWB4 352 aaPredicted RBP17.36■□□□□ 0.37
C11orf88-202ENST00000375618 STXBP4Q6ZWJ1 553 aa17.36■□□□□ 0.37
C11orf88-202ENST00000375618 BRSK2Q8IWQ3 736 aa17.36■□□□□ 0.37
C11orf88-202ENST00000375618 SLC22A17Q8WUG5 538 aa17.36■□□□□ 0.37
C11orf88-202ENST00000375618 MSLNLQ96KJ4 702 aa17.36■□□□□ 0.37
C11orf88-202ENST00000375618 UROC1Q96N76 676 aa17.36■□□□□ 0.37
C11orf88-202ENST00000375618 KLHL5Q96PQ7 755 aa17.36■□□□□ 0.37
C11orf88-202ENST00000375618 HCFC2Q9Y5Z7 792 aa17.36■□□□□ 0.37
C11orf88-202ENST00000375618 VWA8A3KMH1 1905 aa17.36■□□□□ 0.37
C11orf88-202ENST00000375618 SF3B1O75533 1304 aaKnown RBP eCLIP17.36■□□□□ 0.37
C11orf88-202ENST00000375618 EXTL3O43909 919 aa17.35■□□□□ 0.37
C11orf88-202ENST00000375618 URODP06132 367 aa17.35■□□□□ 0.37
C11orf88-202ENST00000375618 BMP1P13497 986 aa17.35■□□□□ 0.37
C11orf88-202ENST00000375618 RPL17P18621 184 aaKnown RBP17.35■□□□□ 0.37
C11orf88-202ENST00000375618 LRPAP1P30533 357 aa17.35■□□□□ 0.37
C11orf88-202ENST00000375618 MRPS5P82675 430 aaKnown RBP17.35■□□□□ 0.37
C11orf88-202ENST00000375618 KNOP1Q1ED39 458 aaKnown RBP17.35■□□□□ 0.37
C11orf88-202ENST00000375618 LEXMQ3ZCV2 418 aa17.35■□□□□ 0.37
C11orf88-202ENST00000375618 SPATA1Q5VX52 437 aa17.35■□□□□ 0.37
C11orf88-202ENST00000375618 CBWD2Q8IUF1 395 aa17.35■□□□□ 0.37
C11orf88-202ENST00000375618 PPP2R3CQ969Q6 453 aa17.35■□□□□ 0.37
C11orf88-202ENST00000375618 IPO9Q96P70 1041 aaKnown RBP17.35■□□□□ 0.37
C11orf88-202ENST00000375618 CDCA3Q99618 268 aaPredicted RBP17.35■□□□□ 0.37
C11orf88-202ENST00000375618 KCTD10Q9H3F6 313 aa17.35■□□□□ 0.37
C11orf88-202ENST00000375618 RXFP1Q9HBX9 757 aa17.35■□□□□ 0.37
C11orf88-202ENST00000375618 MRPL17Q9NRX2 175 aaKnown RBP17.35■□□□□ 0.37
C11orf88-202ENST00000375618 HSPBP1Q9NZL4 362 aa17.35■□□□□ 0.37
C11orf88-202ENST00000375618 UBQLN1Q9UMX0 589 aaKnown RBP17.35■□□□□ 0.37
C11orf88-202ENST00000375618 TEX28O15482 410 aa17.34■□□□□ 0.37
C11orf88-202ENST00000375618 EPCAMP16422 314 aa17.34■□□□□ 0.37
C11orf88-202ENST00000375618 FGFR3P22607 806 aa17.34■□□□□ 0.37
C11orf88-202ENST00000375618 TKTP29401 623 aaKnown RBP17.34■□□□□ 0.37
C11orf88-202ENST00000375618 PTPRJQ12913 1337 aa17.34■□□□□ 0.37
C11orf88-202ENST00000375618 PSMD2Q13200 908 aa17.34■□□□□ 0.37
C11orf88-202ENST00000375618 KCNB1Q14721 858 aa17.34■□□□□ 0.37
C11orf88-202ENST00000375618 USP41Q3LFD5 358 aa17.34■□□□□ 0.37
C11orf88-202ENST00000375618 KANK3Q6NY19 840 aa17.34■□□□□ 0.37
C11orf88-202ENST00000375618 TMEM184AQ6ZMB5 413 aa17.34■□□□□ 0.37
C11orf88-202ENST00000375618 CEP57Q86XR8 500 aa17.34■□□□□ 0.37
C11orf88-202ENST00000375618 SMYD4Q8IYR2 804 aaPredicted RBP17.34■□□□□ 0.37
C11orf88-202ENST00000375618 GPD1LQ8N335 351 aa17.34■□□□□ 0.37
C11orf88-202ENST00000375618 NOC3LQ8WTT2 800 aaKnown RBP17.34■□□□□ 0.37
C11orf88-202ENST00000375618 RIN2Q8WYP3 895 aaPredicted RBP17.34■□□□□ 0.37
C11orf88-202ENST00000375618 DDX27Q96GQ7 796 aaKnown RBP17.34■□□□□ 0.37
C11orf88-202ENST00000375618 ASB7Q9H672 318 aa17.34■□□□□ 0.37
C11orf88-202ENST00000375618 RBAKQ9NYW8 714 aaPredicted RBP17.34■□□□□ 0.37
C11orf88-202ENST00000375618 MAPK8IP1Q9UQF2 711 aa17.34■□□□□ 0.37
C11orf88-202ENST00000375618 GRXCR2A6NFK2 248 aa17.33■□□□□ 0.36
C11orf88-202ENST00000375618 ADAM12O43184 909 aa17.33■□□□□ 0.36
C11orf88-202ENST00000375618 NCK2O43639 380 aa17.33■□□□□ 0.36
C11orf88-202ENST00000375618 CYP3A5P20815 502 aa17.33■□□□□ 0.36
C11orf88-202ENST00000375618 RPL9P32969 192 aaKnown RBP17.33■□□□□ 0.36
C11orf88-202ENST00000375618 NDUFV1P49821 464 aa17.33■□□□□ 0.36
C11orf88-202ENST00000375618 CYP2J2P51589 502 aa17.33■□□□□ 0.36
C11orf88-202ENST00000375618 CLCN4P51793 760 aa17.33■□□□□ 0.36
C11orf88-202ENST00000375618 POU5F1Q01860 360 aaKnown RBP17.33■□□□□ 0.36
C11orf88-202ENST00000375618 TMEM132DQ14C87 1099 aa17.33■□□□□ 0.36
C11orf88-202ENST00000375618 SYCE2Q6PIF2 218 aa17.33■□□□□ 0.36
C11orf88-202ENST00000375618 RSPO2Q6UXX9 243 aaPredicted RBP17.33■□□□□ 0.36
C11orf88-202ENST00000375618 CD302Q8IX05 232 aa17.33■□□□□ 0.36
C11orf88-202ENST00000375618 LNX1Q8TBB1 728 aaPredicted RBP17.33■□□□□ 0.36
C11orf88-202ENST00000375618 FBXL18Q96ME1 805 aa17.33■□□□□ 0.36
C11orf88-202ENST00000375618 TIGD1Q96MW7 591 aa17.33■□□□□ 0.36
C11orf88-202ENST00000375618 GZF1Q9H116 711 aaPredicted RBP17.33■□□□□ 0.36
C11orf88-202ENST00000375618 PDE11AQ9HCR9 933 aa17.33■□□□□ 0.36
C11orf88-202ENST00000375618 STK39Q9UEW8 545 aa17.33■□□□□ 0.36
C11orf88-202ENST00000375618 CDH22Q9UJ99 828 aa17.33■□□□□ 0.36
C11orf88-202ENST00000375618 DERAQ9Y315 318 aa17.33■□□□□ 0.36
C11orf88-202ENST00000375618 PCDHA5Q9Y5H7 936 aa17.33■□□□□ 0.36
C11orf88-202ENST00000375618 PLXNA3P51805 1871 aa17.33■□□□□ 0.36
C11orf88-202ENST00000375618 ANO9A1A5B4 782 aa17.32■□□□□ 0.36
C11orf88-202ENST00000375618 SPTLC1O15269 473 aa17.32■□□□□ 0.36
C11orf88-202ENST00000375618 PRPF40AO75400 957 aaKnown RBP17.32■□□□□ 0.36
C11orf88-202ENST00000375618 LDHAP00338 332 aaKnown RBP17.32■□□□□ 0.36
C11orf88-202ENST00000375618 IL9P15248 144 aa17.32■□□□□ 0.36
C11orf88-202ENST00000375618 KIAA1841Q6NSI8 718 aa17.32■□□□□ 0.36
C11orf88-202ENST00000375618 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.32■□□□□ 0.36
C11orf88-202ENST00000375618 CLEC17AQ6ZS10 378 aa17.32■□□□□ 0.36
C11orf88-202ENST00000375618 GLYCTKQ8IVS8 523 aa17.32■□□□□ 0.36
C11orf88-202ENST00000375618 CXorf38Q8TB03 319 aa17.32■□□□□ 0.36
C11orf88-202ENST00000375618 SPATA20Q8TB22 786 aa17.32■□□□□ 0.36
C11orf88-202ENST00000375618 PIK3R5Q8WYR1 880 aa17.32■□□□□ 0.36
C11orf88-202ENST00000375618 NECAB3Q96P71 396 aaPredicted RBP17.32■□□□□ 0.36
C11orf88-202ENST00000375618 TTPALQ9BTX7 342 aa17.32■□□□□ 0.36
C11orf88-202ENST00000375618 C2CD2Q9Y426 696 aa17.32■□□□□ 0.36
C11orf88-202ENST00000375618 PIRO00625 290 aa17.31■□□□□ 0.36
C11orf88-202ENST00000375618 IL18RAPO95256 599 aa17.31■□□□□ 0.36
C11orf88-202ENST00000375618 KLRC2P26717 231 aa17.31■□□□□ 0.36
C11orf88-202ENST00000375618 AARSP49588 968 aaKnown RBP eCLIP17.31■□□□□ 0.36
C11orf88-202ENST00000375618 BMS1Q14692 1282 aaKnown RBP17.31■□□□□ 0.36
C11orf88-202ENST00000375618 TJAP1Q5JTD0 557 aa17.31■□□□□ 0.36
C11orf88-202ENST00000375618 C9orf57Q5W0N0 161 aa17.31■□□□□ 0.36
C11orf88-202ENST00000375618 LMBRD2Q68DH5 695 aaPredicted RBP17.31■□□□□ 0.36
C11orf88-202ENST00000375618 ANKRD54Q6NXT1 300 aa17.31■□□□□ 0.36
C11orf88-202ENST00000375618 C12orf56Q8IXR9 622 aa17.31■□□□□ 0.36
C11orf88-202ENST00000375618 RDH13Q8NBN7 331 aa17.31■□□□□ 0.36
C11orf88-202ENST00000375618 BEST2Q8NFU1 509 aa17.31■□□□□ 0.36
C11orf88-202ENST00000375618 PLEKHO2Q8TD55 490 aa17.31■□□□□ 0.36
C11orf88-202ENST00000375618 SUSD3Q96L08 255 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms