RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 PALB2Q86YC2 1186 aa16.9■□□□□ 0.3
NIPAL3-204ENST00000374399 UBR7Q8N806 425 aa16.9■□□□□ 0.3
NIPAL3-204ENST00000374399 SLC20A1Q8WUM9 679 aa16.9■□□□□ 0.3
NIPAL3-204ENST00000374399 IFIH1Q9BYX4 1025 aaKnown RBP16.9■□□□□ 0.3
NIPAL3-204ENST00000374399 NXF3Q9H4D5 531 aaKnown RBP16.9■□□□□ 0.3
NIPAL3-204ENST00000374399 PAK6Q9NQU5 681 aaPredicted RBP16.9■□□□□ 0.3
NIPAL3-204ENST00000374399 NOCTQ9UK39 431 aaKnown RBP16.9■□□□□ 0.3
NIPAL3-204ENST00000374399 CYP26A1O43174 497 aa16.89■□□□□ 0.29
NIPAL3-204ENST00000374399 SGPL1O95470 568 aa16.89■□□□□ 0.29
NIPAL3-204ENST00000374399 ANXA13P27216 316 aa16.89■□□□□ 0.29
NIPAL3-204ENST00000374399 NOP14P78316 857 aaKnown RBP16.89■□□□□ 0.29
NIPAL3-204ENST00000374399 DNAAF5Q86Y56 855 aa16.89■□□□□ 0.29
NIPAL3-204ENST00000374399 JAKMIP2Q96AA8 810 aa16.89■□□□□ 0.29
NIPAL3-204ENST00000374399 SNX27Q96L92 541 aa16.89■□□□□ 0.29
NIPAL3-204ENST00000374399 ZMAT2Q96NC0 199 aaKnown RBP16.89■□□□□ 0.29
NIPAL3-204ENST00000374399 PACSIN1Q9BY11 444 aa16.89■□□□□ 0.29
NIPAL3-204ENST00000374399 RNF39Q9H2S5 420 aa16.89■□□□□ 0.29
NIPAL3-204ENST00000374399 AGO3Q9H9G7 860 aaKnown RBP16.89■□□□□ 0.29
NIPAL3-204ENST00000374399 C1orf112Q9NSG2 853 aa16.89■□□□□ 0.29
NIPAL3-204ENST00000374399 SALL4Q9UJQ4 1053 aa16.89■□□□□ 0.29
NIPAL3-204ENST00000374399 NAGPAQ9UK23 515 aa16.89■□□□□ 0.29
NIPAL3-204ENST00000374399 PHF24Q9UPV7 400 aa16.89■□□□□ 0.29
NIPAL3-204ENST00000374399 KIF2AO00139 706 aaPredicted RBP16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 PHACTR2O75167 634 aa16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 TMEM191BP0C7N4 346 aa16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 CHRNB2P17787 502 aa16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 THPOP40225 353 aa16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 MAGEA1P43355 309 aa16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 NCBP1Q09161 790 aaKnown RBP16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 PTK7Q13308 1070 aa16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 CUL2Q13617 745 aa16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 ZBTB6Q15916 424 aa16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 ARHGAP29Q52LW3 1261 aa16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 WDR44Q5JSH3 913 aa16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 TRAF7Q6Q0C0 670 aa16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 ENOSF1Q7L5Y1 443 aa16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 RSPH3Q86UC2 560 aa16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 SLC47A2Q86VL8 602 aa16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 DNAJC5GQ8N7S2 189 aa16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 SMG8Q8ND04 991 aaKnown RBP16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 EPS8L1Q8TE68 723 aa16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 GLT1D1Q96MS3 346 aa16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 ST3GAL5Q9UNP4 418 aa16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 C2CD2Q9Y426 696 aa16.88■□□□□ 0.29
NIPAL3-204ENST00000374399 GUCY2FP51841 1108 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 GNG11P61952 73 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 BMS1Q14692 1282 aaKnown RBP16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 FAM26DQ5JW98 314 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 KIAA1328Q86T90 577 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 NOP9Q86U38 636 aaKnown RBP16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 GLYCTKQ8IVS8 523 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 DDX1Q92499 740 aaKnown RBP16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 ANKRD36BP1Q96IX9 119 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 BEGAINQ9BUH8 593 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 CCDC94Q9BW85 323 aaPredicted RBP16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 TRPV6Q9H1D0 765 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 CNTN6Q9UQ52 1028 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 RPS6KA5O75582 802 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 RECQL4O94761 1208 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 IPO7O95373 1038 aaKnown RBP16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 CALCAP01258 141 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 TNNC2P02585 160 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 TUBB4AP04350 444 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 AKAP5P24588 427 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 TMEM132DQ14C87 1099 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 NAB2Q15742 525 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 SGSM1Q2NKQ1 1148 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 XKR4Q5GH76 650 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 FBXO47Q5MNV8 452 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 CCDC122Q5T0U0 273 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 FMNL3Q8IVF7 1028 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 ARRDC4Q8NCT1 418 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 PCDHB18PQ96TA0 734 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 AGPAT1Q99943 283 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 PLEKHA5Q9HAU0 1116 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 DNAI1Q9UI46 699 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 GUCA1BQ9UMX6 200 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 IPPQ9Y573 584 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 SCN1AP35498 2009 aa16.87■□□□□ 0.29
NIPAL3-204ENST00000374399 MYH10P35580 1976 aa16.86■□□□□ 0.29
NIPAL3-204ENST00000374399 M0QZ92 97 aa16.86■□□□□ 0.29
NIPAL3-204ENST00000374399 ITGB3P05106 788 aa16.86■□□□□ 0.29
NIPAL3-204ENST00000374399 RPLP2P05387 115 aaKnown RBP16.86■□□□□ 0.29
NIPAL3-204ENST00000374399 CYP11B1P15538 503 aa16.86■□□□□ 0.29
NIPAL3-204ENST00000374399 USP8P40818 1118 aa16.86■□□□□ 0.29
NIPAL3-204ENST00000374399 ASPAP45381 313 aa16.86■□□□□ 0.29
NIPAL3-204ENST00000374399 ALKBH5Q6P6C2 394 aaKnown RBP16.86■□□□□ 0.29
NIPAL3-204ENST00000374399 CD302Q8IX05 232 aa16.86■□□□□ 0.29
NIPAL3-204ENST00000374399 ZNF592Q92610 1267 aa16.86■□□□□ 0.29
NIPAL3-204ENST00000374399 FAM81BQ96LP2 452 aa16.86■□□□□ 0.29
NIPAL3-204ENST00000374399 ERVK-5Q9HDB9 667 aa16.86■□□□□ 0.29
NIPAL3-204ENST00000374399 STARD7Q9NQZ5 370 aa16.86■□□□□ 0.29
NIPAL3-204ENST00000374399 TAS2R14Q9NYV8 317 aa16.86■□□□□ 0.29
NIPAL3-204ENST00000374399 CNTN3Q9P232 1028 aa16.86■□□□□ 0.29
NIPAL3-204ENST00000374399 MYCP01106 439 aaPredicted RBP16.85■□□□□ 0.29
NIPAL3-204ENST00000374399 CCDC172P0C7W6 258 aa16.85■□□□□ 0.29
NIPAL3-204ENST00000374399 CDK7P50613 346 aa16.85■□□□□ 0.29
NIPAL3-204ENST00000374399 LPIN1Q14693 890 aa16.85■□□□□ 0.29
NIPAL3-204ENST00000374399 ZNF618Q5T7W0 954 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms