RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 METTL13Q8N6R0 699 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 C12orf50Q8NA57 414 aaPredicted RBP9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 BBOF1Q8ND07 529 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 PPTC7Q8NI37 304 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 TAS1R2Q8TE23 839 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 BSNDQ8WZ55 320 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 CCDC102AQ96A19 550 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 OPTNQ96CV9 577 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 ANKRD36BP1Q96IX9 119 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 SH3GL2Q99962 352 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 ZSWIM1Q9BR11 485 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 SYT17Q9BSW7 474 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 PACSIN1Q9BY11 444 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 INO80BQ9C086 356 aaPredicted RBP9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 CCDC113Q9H0I3 377 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 VRTNQ9H8Y1 702 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 ELP3Q9H9T3 547 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 CYP3A43Q9HB55 503 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 RBM12Q9NTZ6 932 aaKnown RBP9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 WDR35Q9P2L0 1181 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 ADAM21Q9UKJ8 722 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 HPCAL4Q9UM19 191 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 DERAQ9Y315 318 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 IVNS1ABPQ9Y6Y0 642 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 MYH9P35579 1960 aaKnown RBP9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 MYO1FO00160 1098 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 PSTPIP1O43586 416 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 ZEB2O60315 1214 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 SEC31AO94979 1220 aaKnown RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 ASS1P00966 412 aaKnown RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 TNNC2P02585 160 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 PAEPP09466 180 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 CLTAP09496 248 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 DLATP10515 647 aaKnown RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 TXNP10599 105 aaKnown RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 HOXD8P13378 290 aaPredicted RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 CYP2C19P33261 490 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 RDXP35241 583 aaKnown RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 HSPA9P38646 679 aaKnown RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 PIK3CAP42336 1068 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 TNNT3P45378 269 aaPredicted RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 INHBEP58166 350 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 FMO1Q01740 532 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 CNTN2Q02246 1040 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 C2orf54Q08AI8 447 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 LAMTOR4Q0VGL1 99 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 BIRC3Q13489 604 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 MOGSQ13724 837 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 SLMAPQ14BN4 828 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 ENOX2Q16206 610 aaKnown RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 TAS1R3Q7RTX0 852 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 NOP9Q86U38 636 aaKnown RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 ARHGEF19Q8IW93 802 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 OLIG1Q8TAK6 271 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 ZNF564Q8TBZ8 553 aaPredicted RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 PRPF31Q8WWY3 499 aaKnown RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 DDX1Q92499 740 aaKnown RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 RNPC3Q96LT9 517 aaKnown RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 KREMEN1Q96MU8 473 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 SPATA33Q96N06 139 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 PARK7Q99497 189 aaKnown RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 ACO2Q99798 780 aaKnown RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 FHDC1Q9C0D6 1143 aaPredicted RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 THAP2Q9H0W7 228 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 STMN4Q9H169 189 aaPredicted RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 LHX5Q9H2C1 402 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 ABHD16BQ9H3Z7 469 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 PLEKHA5Q9HAU0 1116 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 EPB41L5Q9HCM4 733 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 PDE11AQ9HCR9 933 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 SEPT11Q9NVA2 429 aaKnown RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 PARVAQ9NVD7 372 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 MTRF1LQ9UGC7 380 aaKnown RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 CPSF3Q9UKF6 684 aaKnown RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 PCDHGC3Q9UN70 934 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 TFR2Q9UP52 801 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 EFR3BQ9Y2G0 817 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 Q9Y3F1 56 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 NOC2LQ9Y3T9 749 aaKnown RBP9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 SIP14410 1827 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 KIAA1217Q5T5P2 1943 aa9.32□□□□□ -0.92
SNRNP40-202ENST00000373720 ADGRA3Q8IWK6 1321 aa9.31□□□□□ -0.92
SNRNP40-202ENST00000373720 CNTNAP2Q9UHC6 1331 aa9.31□□□□□ -0.92
SNRNP40-202ENST00000373720 HMGB1P1B2RPK0 211 aaPredicted RBP9.31□□□□□ -0.92
SNRNP40-202ENST00000373720 SMAPO00193 183 aa9.31□□□□□ -0.92
SNRNP40-202ENST00000373720 DDX3YO15523 660 aaKnown RBP9.31□□□□□ -0.92
SNRNP40-202ENST00000373720 CYP26A1O43174 497 aa9.31□□□□□ -0.92
SNRNP40-202ENST00000373720 PHF2O75151 1096 aa9.31□□□□□ -0.92
SNRNP40-202ENST00000373720 LRRN2O75325 713 aa9.31□□□□□ -0.92
SNRNP40-202ENST00000373720 ZNF189O75820 626 aaPredicted RBP9.31□□□□□ -0.92
SNRNP40-202ENST00000373720 HLA-DRAP01903 254 aa9.31□□□□□ -0.92
SNRNP40-202ENST00000373720 PRKCBP05771 671 aa9.31□□□□□ -0.92
SNRNP40-202ENST00000373720 FAM163BP0C2L3 166 aa9.31□□□□□ -0.92
SNRNP40-202ENST00000373720 DESP17661 470 aa9.31□□□□□ -0.92
SNRNP40-202ENST00000373720 CHRNB2P17787 502 aa9.31□□□□□ -0.92
SNRNP40-202ENST00000373720 AXLP30530 894 aa9.31□□□□□ -0.92
SNRNP40-202ENST00000373720 CXCR5P32302 372 aa9.31□□□□□ -0.92
SNRNP40-202ENST00000373720 CDH5P33151 784 aaPredicted RBP9.31□□□□□ -0.92
SNRNP40-202ENST00000373720 USP8P40818 1118 aa9.31□□□□□ -0.92
SNRNP40-202ENST00000373720 MATR3P43243 847 aaKnown RBP eCLIP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms