RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 NRXN1Q9ULB1 1477 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 CNGA3Q16281 694 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 TTC8Q8TAM2 541 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 DNAJC7Q99615 494 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 FUCA2Q9BTY2 467 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 ADA2Q9NZK5 511 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 BLOC1S6Q9UL45 172 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 ZHX2Q9Y6X8 837 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 SERPINB1P30740 379 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 DUOXA2Q1HG44 320 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 TMEM154Q6P9G4 183 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 ROPN1BQ9BZX4 212 aaPredicted RBP14.96□□□□□ -0.01
LMX1B-202ENST00000373474 ROPN1Q9HAT0 212 aaPredicted RBP14.96□□□□□ -0.01
LMX1B-202ENST00000373474 ENO4A6NNW6 628 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 DNAL1Q4LDG9 190 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 JAMLQ86YT9 394 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 ACAD9Q9H845 621 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 PPCSQ9HAB8 311 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 DIP2CQ9Y2E4 1556 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 PHF20L1A8MW92 1017 aa14.96□□□□□ -0.02
LMX1B-202ENST00000373474 HNRNPRO43390 633 aaKnown RBP14.96□□□□□ -0.02
LMX1B-202ENST00000373474 SUPT3HO75486 399 aa14.96□□□□□ -0.02
LMX1B-202ENST00000373474 CDH6P55285 790 aa14.96□□□□□ -0.02
LMX1B-202ENST00000373474 ZNF772Q68DY9 489 aaPredicted RBP14.96□□□□□ -0.02
LMX1B-202ENST00000373474 PLD3Q8IV08 490 aa14.96□□□□□ -0.02
LMX1B-202ENST00000373474 OR2W6PQ8NHA6 318 aa14.96□□□□□ -0.02
LMX1B-202ENST00000373474 TUBGCP3Q96CW5 907 aa14.96□□□□□ -0.02
LMX1B-202ENST00000373474 MAD2L2Q9UI95 211 aa14.96□□□□□ -0.02
LMX1B-202ENST00000373474 DBR1Q9UK59 544 aaKnown RBP14.96□□□□□ -0.02
LMX1B-202ENST00000373474 FNDC3AQ9Y2H6 1198 aaKnown RBP14.96□□□□□ -0.02
LMX1B-202ENST00000373474 MYL3P08590 195 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 RASA1P20936 1047 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 PGM1P36871 562 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 CYFIP1Q7L576 1253 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 TRAPPC11Q7Z392 1133 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 SLC30A5Q8TAD4 765 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 CPA5Q8WXQ8 436 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 CAMTA2O94983 1202 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 PDHBP11177 359 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 ERVK-24P63145 666 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 CAPRIN1Q14444 709 aaKnown RBP14.95□□□□□ -0.02
LMX1B-202ENST00000373474 INPP5AQ14642 412 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 EFHC2Q5JST6 749 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 KLHDC7AQ5VTJ3 777 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 FBXW10Q5XX13 1052 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 INPP5FQ9Y2H2 1132 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 SESN1Q9Y6P5 492 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 EFNA5P52803 228 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 CCDC85BQ15834 202 aaPredicted RBP14.95□□□□□ -0.02
LMX1B-202ENST00000373474 TRAF7Q6Q0C0 670 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 CCDC134Q9H6E4 229 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 OLA1Q9NTK5 396 aaKnown RBP14.95□□□□□ -0.02
LMX1B-202ENST00000373474 PRR23D1E9PI22 279 aaPredicted RBP14.95□□□□□ -0.02
LMX1B-202ENST00000373474 F5H423 210 aaPredicted RBP14.95□□□□□ -0.02
LMX1B-202ENST00000373474 SNX2O60749 519 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 PRR23D2P0DMB1 279 aaPredicted RBP14.95□□□□□ -0.02
LMX1B-202ENST00000373474 SLC9A1P19634 815 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 FRA10AC1Q70Z53 315 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 KCTD17Q8N5Z5 321 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 CYFIP2Q96F07 1278 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 IFT43Q96FT9 208 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 WRNIP1Q96S55 665 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 KLHL11Q9NVR0 708 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 NYAP2Q9P242 653 aa14.95□□□□□ -0.02
LMX1B-202ENST00000373474 SNRPFP62306 86 aaKnown RBP14.94□□□□□ -0.02
LMX1B-202ENST00000373474 DHX35Q9H5Z1 703 aaKnown RBP14.94□□□□□ -0.02
LMX1B-202ENST00000373474 PSMC3IPQ9P2W1 217 aaPredicted RBP14.94□□□□□ -0.02
LMX1B-202ENST00000373474 CDH16O75309 829 aa14.94□□□□□ -0.02
LMX1B-202ENST00000373474 NSUN2Q08J23 767 aaKnown RBP eCLIP14.94□□□□□ -0.02
LMX1B-202ENST00000373474 ZNF555Q8NEP9 628 aa14.94□□□□□ -0.02
LMX1B-202ENST00000373474 NR1H4Q96RI1 486 aaPredicted RBP14.94□□□□□ -0.02
LMX1B-202ENST00000373474 MAGEB5Q9BZ81 275 aa14.94□□□□□ -0.02
LMX1B-202ENST00000373474 HPSEQ9Y251 543 aa14.94□□□□□ -0.02
LMX1B-202ENST00000373474 ANP32DO95626 131 aa14.94□□□□□ -0.02
LMX1B-202ENST00000373474 SERPINB3P29508 390 aa14.94□□□□□ -0.02
LMX1B-202ENST00000373474 IRAK1P51617 712 aa14.94□□□□□ -0.02
LMX1B-202ENST00000373474 OLFML2BQ68BL8 750 aa14.94□□□□□ -0.02
LMX1B-202ENST00000373474 LONP2Q86WA8 852 aa14.94□□□□□ -0.02
LMX1B-202ENST00000373474 RNF217Q8TC41 542 aa14.94□□□□□ -0.02
LMX1B-202ENST00000373474 SGSM3Q96HU1 749 aa14.94□□□□□ -0.02
LMX1B-202ENST00000373474 RBM15Q96T37 977 aaKnown RBP eCLIP14.94□□□□□ -0.02
LMX1B-202ENST00000373474 PNKPQ96T60 521 aa14.94□□□□□ -0.02
LMX1B-202ENST00000373474 MRPS26Q9BYN8 205 aaKnown RBP14.94□□□□□ -0.02
LMX1B-202ENST00000373474 C1orf167Q5SNV9 1468 aa14.94□□□□□ -0.02
LMX1B-202ENST00000373474 LMBRD2Q68DH5 695 aaPredicted RBP14.94□□□□□ -0.02
LMX1B-202ENST00000373474 CATSPER3Q86XQ3 398 aa14.94□□□□□ -0.02
LMX1B-202ENST00000373474 TBC1D16Q8TBP0 767 aa14.94□□□□□ -0.02
LMX1B-202ENST00000373474 JPH1Q9HDC5 661 aaPredicted RBP14.94□□□□□ -0.02
LMX1B-202ENST00000373474 PDP2Q9P2J9 529 aa14.94□□□□□ -0.02
LMX1B-202ENST00000373474 GGT7Q9UJ14 662 aa14.94□□□□□ -0.02
LMX1B-202ENST00000373474 KDM6AO15550 1401 aaPredicted RBP14.94□□□□□ -0.02
LMX1B-202ENST00000373474 TTLL4Q14679 1199 aa14.94□□□□□ -0.02
LMX1B-202ENST00000373474 NFIXQ14938 502 aa14.94□□□□□ -0.02
LMX1B-202ENST00000373474 NKX1-1Q15270 411 aaPredicted RBP14.94□□□□□ -0.02
LMX1B-202ENST00000373474 SNRNP35Q16560 246 aaKnown RBP14.94□□□□□ -0.02
LMX1B-202ENST00000373474 PTGISQ16647 500 aa14.94□□□□□ -0.02
LMX1B-202ENST00000373474 FOXP3Q9BZS1 431 aa14.94□□□□□ -0.02
LMX1B-202ENST00000373474 TMCC1O94876 653 aa14.93□□□□□ -0.02
LMX1B-202ENST00000373474 CD44P16070 742 aaKnown RBP14.93□□□□□ -0.02
LMX1B-202ENST00000373474 ADORA2BP29275 332 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms