RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 ARMCX5Q6P1M9 558 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 CERS5Q8N5B7 392 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 SMIM22K7EJ46 135 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 MEIS1O00470 390 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 RTN3O95197 1032 aaPredicted RBP6.95□□□□□ -1.3
CHD6-203ENST00000373233 PLA2G4BP0C869 781 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 GAP43P17677 238 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 CBX3Q13185 183 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 RSBN1Q5VWQ0 802 aaPredicted RBP6.95□□□□□ -1.3
CHD6-203ENST00000373233 LRRC8BQ6P9F7 803 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 EXOC8Q8IYI6 725 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 ERP27Q96DN0 273 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 RPS6KC1Q96S38 1066 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 FAM217BQ9NTX9 383 aaPredicted RBP6.95□□□□□ -1.3
CHD6-203ENST00000373233 HDAC6Q9UBN7 1215 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 COL4A3BPQ9Y5P4 624 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 POC1B-GALNT4F8VUJ3 575 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 ATG16L1Q676U5 607 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 SFR1Q86XK3 245 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 GMCL1P1Q8NEA9 526 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 DDI1Q8WTU0 396 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 FAM163AQ96GL9 167 aaPredicted RBP6.95□□□□□ -1.3
CHD6-203ENST00000373233 WDR11Q9BZH6 1224 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 SEL1LQ9UBV2 794 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 CFAP99D6REC4 459 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 H3BRJ5 948 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 TSC22D2O75157 780 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 IMPDH2P12268 514 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 XRCC5P13010 732 aaKnown RBP6.95□□□□□ -1.3
CHD6-203ENST00000373233 ALOX15P16050 662 aaPredicted RBP6.95□□□□□ -1.3
CHD6-203ENST00000373233 SCNN1BP51168 640 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 DEPDC1Q5TB30 811 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 TRIM59Q8IWR1 403 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 RAD54LQ92698 747 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 PBKQ96KB5 322 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 RNPEPQ9H4A4 650 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 L2HGDHQ9H9P8 463 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 PITPNM2Q9BZ72 1349 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 PP2D1A8MPX8 630 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 FAM25AB3EWG3 89 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 FAM25CB3EWG5 89 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 FAM25GB3EWG6 89 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 RGS20O76081 388 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 NDUFA10O95299 355 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 HLA-DPA1P20036 260 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 ABL2P42684 1182 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 LRIG3Q6UXM1 1119 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 NCAPG2Q86XI2 1143 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 ANKS1AQ92625 1134 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 HSPA6P17066 643 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 OSBPP22059 807 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 ERFP50548 548 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 ANGPT1Q15389 498 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 BSPRYQ5W0U4 402 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 SNRNP48Q6IEG0 339 aaKnown RBP6.95□□□□□ -1.3
CHD6-203ENST00000373233 MYCBPAPQ8TBZ2 947 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 PKD2L2Q9NZM6 624 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 MOCS3O95396 460 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 PRLP01236 227 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 CASP1P29466 404 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 FAM26FQ5R3K3 315 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 ANGEL2Q5VTE6 544 aaKnown RBP6.95□□□□□ -1.3
CHD6-203ENST00000373233 ATP8B4Q8TF62 1192 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 PRMT6Q96LA8 375 aaPredicted RBP6.95□□□□□ -1.3
CHD6-203ENST00000373233 FUT8Q9BYC5 575 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 ARHGEF38Q9NXL2 777 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 ROBO3Q96MS0 1386 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 DNALI1O14645 258 aaPredicted RBP6.94□□□□□ -1.3
CHD6-203ENST00000373233 CCDC22O60826 627 aa6.94□□□□□ -1.3
CHD6-203ENST00000373233 MMP14P50281 582 aa6.94□□□□□ -1.3
CHD6-203ENST00000373233 SPDYE2Q495Y8 402 aa6.94□□□□□ -1.3
CHD6-203ENST00000373233 SRRM1Q8IYB3 904 aaKnown RBP6.94□□□□□ -1.3
CHD6-203ENST00000373233 DEPDC7Q96QD5 511 aa6.94□□□□□ -1.3
CHD6-203ENST00000373233 CAMKK2Q96RR4 588 aa6.94□□□□□ -1.3
CHD6-203ENST00000373233 OSBPL10Q9BXB5 764 aa6.94□□□□□ -1.3
CHD6-203ENST00000373233 JMJD4Q9H9V9 463 aa6.94□□□□□ -1.3
CHD6-203ENST00000373233 FOXN1O15353 648 aa6.94□□□□□ -1.3
CHD6-203ENST00000373233 EIF2S1P05198 315 aaKnown RBP6.94□□□□□ -1.3
CHD6-203ENST00000373233 NCF2P19878 526 aaPredicted RBP6.94□□□□□ -1.3
CHD6-203ENST00000373233 CYP2J2P51589 502 aa6.94□□□□□ -1.3
CHD6-203ENST00000373233 CCZ1BP86790 482 aa6.94□□□□□ -1.3
CHD6-203ENST00000373233 CCZ1P86791 482 aaPredicted RBP6.94□□□□□ -1.3
CHD6-203ENST00000373233 PTPAQ15257 358 aa6.94□□□□□ -1.3
CHD6-203ENST00000373233 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.94□□□□□ -1.3
CHD6-203ENST00000373233 TDP2O95551 362 aa6.94□□□□□ -1.3
CHD6-203ENST00000373233 RFC5P40937 340 aa6.94□□□□□ -1.3
CHD6-203ENST00000373233 FAAH2Q6GMR7 532 aa6.94□□□□□ -1.3
CHD6-203ENST00000373233 EPM2AIP1Q7L775 607 aaPredicted RBP6.94□□□□□ -1.3
CHD6-203ENST00000373233 ZFRQ96KR1 1074 aaKnown RBP6.94□□□□□ -1.3
CHD6-203ENST00000373233 PRMT1Q99873 361 aaKnown RBP6.94□□□□□ -1.3
CHD6-203ENST00000373233 IMPG2Q9BZV3 1241 aa6.94□□□□□ -1.3
CHD6-203ENST00000373233 NLRC4Q9NPP4 1024 aa6.94□□□□□ -1.3
CHD6-203ENST00000373233 RNF103-CHMP3A0A140T963 221 aa6.94□□□□□ -1.3
CHD6-203ENST00000373233 COPB2P35606 906 aa6.94□□□□□ -1.3
CHD6-203ENST00000373233 DMP1Q13316 513 aaPredicted RBP6.94□□□□□ -1.3
CHD6-203ENST00000373233 CTTNQ14247 550 aaKnown RBP6.94□□□□□ -1.3
CHD6-203ENST00000373233 C16orf72Q14CZ0 275 aa6.94□□□□□ -1.3
CHD6-203ENST00000373233 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.94□□□□□ -1.34e-7■□□□□ 11.1
CHD6-203ENST00000373233 P2RX5Q93086 422 aa6.94□□□□□ -1.3
CHD6-203ENST00000373233 LBHD1Q9BQE6 289 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms