RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 BRD2P25440 801 aaKnown RBP10.33□□□□□ -0.76
COL4A6-202ENST00000372216 IFNA8P32881 189 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 THPOP40225 353 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 BCAR1P56945 870 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 TPI1P60174 286 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 TMED1Q13445 227 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 PKN3Q6P5Z2 889 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 RHOT1Q8IXI2 618 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 OPTNQ96CV9 577 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 DACH2Q96NX9 599 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 CCSER1Q9C0I3 900 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 IGFLR1Q9H665 355 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 EIF4E1BA6NMX2 242 aaKnown RBP10.33□□□□□ -0.76
COL4A6-202ENST00000372216 SRGNP10124 158 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 PBLDP30039 288 aaPredicted RBP10.33□□□□□ -0.76
COL4A6-202ENST00000372216 PPP4CP60510 307 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 RAD51Q06609 339 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 ZC2HC1CQ53FD0 456 aaPredicted RBP10.33□□□□□ -0.76
COL4A6-202ENST00000372216 SPDYAQ5MJ70 313 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 SDE2Q6IQ49 451 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 ANKS3Q6ZW76 656 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 SPATS2Q86XZ4 545 aaKnown RBP10.33□□□□□ -0.76
COL4A6-202ENST00000372216 ACER1Q8TDN7 264 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 SCG3Q8WXD2 468 aaKnown RBP10.33□□□□□ -0.76
COL4A6-202ENST00000372216 TRIM9Q9C026 710 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 MAP3K13O43283 966 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 ZFXP17010 805 aaPredicted RBP10.32□□□□□ -0.76
COL4A6-202ENST00000372216 KIZQ2M2Z5 673 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 SGSM1Q2NKQ1 1148 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 NBPF9Q3BBW0 867 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 XRRA1Q6P2D8 792 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 RINLQ6ZS11 566 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 METTL16Q86W50 562 aaKnown RBP10.32□□□□□ -0.76
COL4A6-202ENST00000372216 ARHGAP18Q8N392 663 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 OR6P1Q8NGX9 317 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 CPA5Q8WXQ8 436 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 GPRASP2Q96D09 838 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 PARD6BQ9BYG5 372 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 RTN2O75298 545 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 MAPK9P45984 424 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 SEMA3FQ13275 785 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 C6orf118Q5T5N4 469 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 ERO1BQ86YB8 467 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 ATP11CQ8NB49 1132 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 MLXIPLQ9NP71 852 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 FAN1Q9Y2M0 1017 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 PGK2P07205 417 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 ADCY2Q08462 1091 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 WASHC5Q12768 1159 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 E2F5Q15329 346 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 MDH1BQ5I0G3 518 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 RASIP1Q5U651 963 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 ALKBH2Q6NS38 261 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 GIPC2Q8TF65 315 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 RIT2Q99578 217 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 FBXO28Q9NVF7 368 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 SELENONQ9NZV5 590 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 MYMKA6NI61 221 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 COPEO14579 308 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 BACE1P56817 501 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 ZSCAN26Q16670 478 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 IL31Q6EBC2 164 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 ARMC6Q6NXE6 501 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 NOTUMQ6P988 496 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 SPATA31D1Q6ZQQ2 1576 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 L3MBTL3Q96JM7 780 aaPredicted RBP10.32□□□□□ -0.76
COL4A6-202ENST00000372216 MAP3K14Q99558 947 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 ADAM33Q9BZ11 813 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 CNOT10Q9H9A5 744 aaKnown RBP10.32□□□□□ -0.76
COL4A6-202ENST00000372216 KRT37O76014 449 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 WEE1P30291 646 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 ERFP50548 548 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 EIF3BP55884 814 aaKnown RBP10.32□□□□□ -0.76
COL4A6-202ENST00000372216 DPYDQ12882 1025 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 GPS1Q13098 491 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 NUDCD3Q8IVD9 361 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 TTC8Q8TAM2 541 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 GLT1D1Q96MS3 346 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 SLC13A1Q9BZW2 595 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 CPA4Q9UI42 421 aa10.32□□□□□ -0.76
COL4A6-202ENST00000372216 PACSIN2Q9UNF0 486 aaPredicted RBP10.32□□□□□ -0.76
COL4A6-202ENST00000372216 TNS2Q63HR2 1409 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 A0A0G2JND7 137 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 TTC26A0AVF1 554 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 SMARCA1P28370 1054 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 PRKCQQ04759 706 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 IFT88Q13099 833 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 TCEA2Q15560 299 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 PLAAQ9Y263 795 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 RGL2O15211 777 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 SKAP2O75563 359 aaPredicted RBP10.31□□□□□ -0.76
COL4A6-202ENST00000372216 KRT14P02533 472 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 ACTR2P61160 394 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 NFRKBQ6P4R8 1299 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 CHMP1BQ7LBR1 199 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 AGAP3Q96P47 875 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 APEX2Q9UBZ4 518 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 SUN2Q9UH99 717 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 SH3BP1Q9Y3L3 701 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 PPP2R3BQ9Y5P8 575 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms