RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 PPP2R2AP63151 447 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 FBXO33Q7Z6M2 555 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 SPDYE1Q8NFV5 336 aaPredicted RBP14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 SEPT1Q8WYJ6 367 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 GDAQ9Y2T3 454 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 LSM1O15116 133 aaKnown RBP14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 CLDN3O15551 220 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 CTIFO43310 598 aaKnown RBP14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 HSPA1AP0DMV8 641 aaKnown RBP14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 HSPA1BP0DMV9 641 aaKnown RBP14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 PGM1P36871 562 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 KLC3Q6P597 504 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 LY9Q9HBG7 655 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 KIF28PB7ZC32 967 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 BAIAP3O94812 1187 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 CD58P19256 250 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 ANGPTL8Q6UXH0 198 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 SMYD4Q8IYR2 804 aaPredicted RBP14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 MICU2Q8IYU8 434 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 TCAIMQ8N3R3 496 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 NARS2Q96I59 477 aaKnown RBP14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 TAC1P20366 129 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 AP1S2P56377 157 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 FOXD4Q12950 439 aaPredicted RBP14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 C16orf72Q14CZ0 275 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 PADI6Q6TGC4 694 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.8□□□□□ -0.047e-7■■■□□ 18.6
RAPGEF1-202ENST00000372190 TMEM131LA2VDJ0 1609 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 A0A087WWV3 80 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 UBTFL6P0CB48 400 aaPredicted RBP14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 FCHO2Q0JRZ9 810 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 ARL6IP4Q66PJ3 421 aaKnown RBP14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 TTC30AQ86WT1 665 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 INPP5DQ92835 1189 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 PPP2R3CQ969Q6 453 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 NHEJ1Q9H9Q4 299 aaPredicted RBP14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 TRIM13O60858 407 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 GH1P01241 217 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 P4HBP07237 508 aaKnown RBP14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 ARHGAP17Q68EM7 881 aa14.8□□□□□ -0.04
RAPGEF1-202ENST00000372190 TRIM24O15164 1050 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 SRGNP10124 158 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 PPP4R4Q6NUP7 873 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 C11orf88Q6PI97 169 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 BEST2Q8NFU1 509 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 MTMR4Q9NYA4 1195 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 WDR19Q8NEZ3 1342 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 IMPDH2P12268 514 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 CDC27P30260 824 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 QARSP47897 775 aaKnown RBP14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 SGO2Q562F6 1265 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 TTBK2Q6IQ55 1244 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 EPM2AIP1Q7L775 607 aaPredicted RBP14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 GANCQ8TET4 914 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 RGL1Q9NZL6 768 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 NYAP2Q9P242 653 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 SRPRBQ9Y5M8 271 aaKnown RBP14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 PFASO15067 1338 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 SMARCA1P28370 1054 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 MAN2A1Q16706 1144 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 FAM47EQ6ZV65 393 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 TAB3Q8N5C8 712 aaPredicted RBP14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 DEPDC1BQ8WUY9 529 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 VCPKMTQ9H867 229 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 POLLQ9UGP5 575 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 HSPA13P48723 471 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 PSMC5P62195 406 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 MESDQ14696 234 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 MAPRE2Q15555 327 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 POTEEQ6S8J3 1075 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 PIGUQ9H490 435 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 BARHL2Q9NY43 387 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 SCN3BQ9NY72 215 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 COPEO14579 308 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 TRIM66O15016 1216 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 DDNO94850 711 aaPredicted RBP14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 SOX6P35712 828 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 MMP14P50281 582 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 BTKQ06187 659 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 RESTQ13127 1097 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 TSTA3Q13630 321 aaPredicted RBP14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 CC2D1AQ6P1N0 951 aaPredicted RBP14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 GPR141Q7Z602 305 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 MFN1Q8IWA4 741 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 TTC17Q96AE7 1141 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 TTC25Q96NG3 672 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 FHDC1Q9C0D6 1143 aaPredicted RBP14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 THAP9Q9H5L6 903 aa14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 SAMSN1Q9NSI8 373 aaKnown RBP14.79□□□□□ -0.04
RAPGEF1-202ENST00000372190 MFN2O95140 757 aa14.78□□□□□ -0.04
RAPGEF1-202ENST00000372190 ANP32DO95626 131 aa14.78□□□□□ -0.04
RAPGEF1-202ENST00000372190 RCAN1P53805 252 aa14.78□□□□□ -0.04
RAPGEF1-202ENST00000372190 BAATQ14032 418 aaPredicted RBP14.78□□□□□ -0.04
RAPGEF1-202ENST00000372190 GRAMD1CQ8IYS0 662 aa14.78□□□□□ -0.04
RAPGEF1-202ENST00000372190 ZKSCAN4Q969J2 545 aaPredicted RBP14.78□□□□□ -0.04
RAPGEF1-202ENST00000372190 POLR3FQ9H1D9 316 aaPredicted RBP14.78□□□□□ -0.04
RAPGEF1-202ENST00000372190 KPNA7A9QM74 516 aa14.78□□□□□ -0.04
RAPGEF1-202ENST00000372190 XPO1O14980 1071 aaKnown RBP14.78□□□□□ -0.04
RAPGEF1-202ENST00000372190 NDUFB10O96000 172 aa14.78□□□□□ -0.04
RAPGEF1-202ENST00000372190 S100A6P06703 90 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms