RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 GDF3Q9NR23 364 aa18.21■□□□□ 0.51
VEGFA-205ENST00000372067 TMOD1P28289 359 aa18.21■□□□□ 0.51
VEGFA-205ENST00000372067 CDR2Q01850 454 aa18.21■□□□□ 0.51
VEGFA-205ENST00000372067 ZBTB41Q5SVQ8 909 aa18.21■□□□□ 0.51
VEGFA-205ENST00000372067 SLFN12LQ6IEE8 588 aa18.21■□□□□ 0.51
VEGFA-205ENST00000372067 LLGL2Q6P1M3 1020 aa18.21■□□□□ 0.51
VEGFA-205ENST00000372067 SLC39A4Q6P5W5 647 aa18.21■□□□□ 0.51
VEGFA-205ENST00000372067 ANKRD23Q86SG2 305 aa18.21■□□□□ 0.51
VEGFA-205ENST00000372067 DRAXINQ8NBI3 349 aaPredicted RBP18.21■□□□□ 0.51
VEGFA-205ENST00000372067 TRAPPC12Q8WVT3 735 aa18.21■□□□□ 0.51
VEGFA-205ENST00000372067 PRPF31Q8WWY3 499 aaKnown RBP18.21■□□□□ 0.51
VEGFA-205ENST00000372067 SEPT1Q8WYJ6 367 aa18.21■□□□□ 0.51
VEGFA-205ENST00000372067 G3BP2Q9UN86 482 aaKnown RBP18.21■□□□□ 0.51
VEGFA-205ENST00000372067 GLRA2P23416 452 aa18.2■□□□□ 0.5
VEGFA-205ENST00000372067 SF3A3Q12874 501 aaKnown RBP eCLIP18.2■□□□□ 0.59e-12■■■■■ 32
VEGFA-205ENST00000372067 SPATA33Q96N06 139 aa18.2■□□□□ 0.5
VEGFA-205ENST00000372067 ISCUQ9H1K1 167 aa18.2■□□□□ 0.5
VEGFA-205ENST00000372067 MIF4GDA9UHW6 222 aaKnown RBP18.2■□□□□ 0.5
VEGFA-205ENST00000372067 EIF3HO15372 352 aaKnown RBP eCLIP18.2■□□□□ 0.52e-7■■■□□ 15.1
VEGFA-205ENST00000372067 FAM71AQ8IYT1 594 aa18.2■□□□□ 0.5
VEGFA-205ENST00000372067 TMC2Q8TDI7 906 aa18.2■□□□□ 0.5
VEGFA-205ENST00000372067 C1orf54Q8WWF1 131 aa18.2■□□□□ 0.5
VEGFA-205ENST00000372067 C18orf8Q96DM3 657 aa18.2■□□□□ 0.5
VEGFA-205ENST00000372067 HES6Q96HZ4 224 aa18.2■□□□□ 0.5
VEGFA-205ENST00000372067 FMO2Q99518 471 aa18.2■□□□□ 0.5
VEGFA-205ENST00000372067 SLITRK6Q9H5Y7 841 aa18.2■□□□□ 0.5
VEGFA-205ENST00000372067 TMEM191BP0C7N4 346 aa18.2■□□□□ 0.5
VEGFA-205ENST00000372067 GARTP22102 1010 aa18.2■□□□□ 0.5
VEGFA-205ENST00000372067 FMO1Q01740 532 aa18.2■□□□□ 0.5
VEGFA-205ENST00000372067 FBXO16Q8IX29 292 aaPredicted RBP18.2■□□□□ 0.5
VEGFA-205ENST00000372067 KIAA1586Q9HCI6 787 aa18.2■□□□□ 0.5
VEGFA-205ENST00000372067 FAM114A2Q9NRY5 505 aa18.2■□□□□ 0.5
VEGFA-205ENST00000372067 DNAJC17Q9NVM6 304 aaKnown RBP18.2■□□□□ 0.5
VEGFA-205ENST00000372067 ZNF112Q9UJU3 913 aa18.2■□□□□ 0.5
VEGFA-205ENST00000372067 PFASO15067 1338 aa18.2■□□□□ 0.5
VEGFA-205ENST00000372067 CSDE1O75534 798 aaKnown RBP18.19■□□□□ 0.5
VEGFA-205ENST00000372067 CALCOCO2Q13137 446 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 ACCSLQ4AC99 568 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 ZNF572Q7Z3I7 529 aaPredicted RBP18.19■□□□□ 0.5
VEGFA-205ENST00000372067 REPS2Q8NFH8 660 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.19■□□□□ 0.51e-6■□□□□ 11.1
VEGFA-205ENST00000372067 SCFD2Q8WU76 684 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 SHC3Q92529 594 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 FAM118BQ9BPY3 351 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 SYNCQ9H7C4 482 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 ADAM22Q9P0K1 906 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 SNCAIPQ9Y6H5 919 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 GNA15P30679 374 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 KAZNQ674X7 775 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 GSTA5Q7RTV2 222 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 RUBCNQ92622 972 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 CARD9Q9H257 536 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 ST6GALNAC4Q9H4F1 302 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 MTRF1LQ9UGC7 380 aaKnown RBP18.19■□□□□ 0.5
VEGFA-205ENST00000372067 NCANO14594 1321 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 SYNGAP1Q96PV0 1343 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 MEFVO15553 781 aaPredicted RBP18.19■□□□□ 0.5
VEGFA-205ENST00000372067 CDC25CP30307 473 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 BPIFB4P59827 614 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 DAB2IPQ5VWQ8 1189 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 DCUN1D2Q6PH85 259 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 TAX1BP1Q86VP1 789 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 PSPC1Q8WXF1 523 aaKnown RBP18.19■□□□□ 0.5
VEGFA-205ENST00000372067 MMP19Q99542 508 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 ZSWIM1Q9BR11 485 aa18.19■□□□□ 0.5
VEGFA-205ENST00000372067 ASCC2Q9H1I8 757 aaPredicted RBP18.19■□□□□ 0.5
VEGFA-205ENST00000372067 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.19■□□□□ 0.5
VEGFA-205ENST00000372067 STAM2O75886 525 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 DRP2Q13474 957 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 RBBP5Q15291 538 aaKnown RBP18.18■□□□□ 0.5
VEGFA-205ENST00000372067 HELQQ8TDG4 1101 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 COPS5Q92905 334 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 CAVIN3Q969G5 261 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 CYFIP2Q96F07 1278 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 SLC40A1Q9NP59 571 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 GSTTP1A0A1W2PQM5 241 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 CHRNB2P17787 502 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 RRM1P23921 792 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 MAPK6Q16659 721 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 SGO2Q562F6 1265 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 CCDC137Q6PK04 289 aaKnown RBP18.18■□□□□ 0.5
VEGFA-205ENST00000372067 C12orf42Q96LP6 360 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 SELENOSQ9BQE4 189 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 KLHL11Q9NVR0 708 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 NDUFAB1O14561 156 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 TXNP10599 105 aaKnown RBP18.18■□□□□ 0.5
VEGFA-205ENST00000372067 CETN2P41208 172 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 USP4Q13107 963 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 NCOA4Q13772 614 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 ACAD10Q6JQN1 1059 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 CCDC13Q8IYE1 715 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 ERVK-5Q9HDB9 667 aa18.18■□□□□ 0.5
VEGFA-205ENST00000372067 PPANQ9NQ55 473 aaKnown RBP18.18■□□□□ 0.5
VEGFA-205ENST00000372067 LDHAP00338 332 aaKnown RBP18.17■□□□□ 0.5
VEGFA-205ENST00000372067 GJB1P08034 283 aa18.17■□□□□ 0.5
VEGFA-205ENST00000372067 PYGMP11217 842 aa18.17■□□□□ 0.5
VEGFA-205ENST00000372067 HSD17B3P37058 310 aa18.17■□□□□ 0.5
VEGFA-205ENST00000372067 NAMPTP43490 491 aa18.17■□□□□ 0.5
VEGFA-205ENST00000372067 GPC3P51654 580 aa18.17■□□□□ 0.5
VEGFA-205ENST00000372067 CDR1P51861 262 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms