RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CHID1Q9BWS9 393 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 ERAP1Q9NZ08 941 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.99■□□□□ 0.15
COL5A1-201ENST00000371817 SPDYE5A6NIY4 337 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 INO80B-WBP1J3KQ70 363 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 FTLP02792 175 aaPredicted RBP15.99■□□□□ 0.15
COL5A1-201ENST00000371817 APRTP07741 180 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 SPDYE7PQ495Y7 208 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 INO80BQ9C086 356 aaPredicted RBP15.99■□□□□ 0.15
COL5A1-201ENST00000371817 BTBD3Q9Y2F9 522 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 TLR2O60603 784 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 CBFA2T3O75081 653 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 PURAQ00577 322 aaKnown RBP15.99■□□□□ 0.15
COL5A1-201ENST00000371817 ROR2Q01974 943 aaKnown RBP15.99■□□□□ 0.15
COL5A1-201ENST00000371817 STX5Q13190 355 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 RASGRP2Q7LDG7 609 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 ZNF579Q8NAF0 562 aaKnown RBP15.99■□□□□ 0.15
COL5A1-201ENST00000371817 TBCKQ8TEA7 893 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 RNF25Q96BH1 459 aaPredicted RBP15.99■□□□□ 0.15
COL5A1-201ENST00000371817 EDC3Q96F86 508 aaKnown RBP15.99■□□□□ 0.15
COL5A1-201ENST00000371817 RXFP1Q9HBX9 757 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 AKT3Q9Y243 479 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 PLXNC1O60486 1568 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 EVPLLA8MZ36 301 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 ALOX12P18054 663 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 ITIH2P19823 946 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 SERPINB9P50453 376 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 KCNH2Q12809 1159 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 DGUOKQ16854 277 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 C4orf33Q8N1A6 199 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 TSPAN17Q96FV3 270 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 DCAF5Q96JK2 942 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 RBBP8Q99708 897 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 C15orf41Q9Y2V0 281 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 CTTNBP2Q8WZ74 1663 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 UBXN8O00124 270 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 JAK1P23458 1154 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 TAP1Q03518 808 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 SLFN12LQ6IEE8 588 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 HES6Q96HZ4 224 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 CNOT3O75175 753 aaKnown RBP15.99■□□□□ 0.15
COL5A1-201ENST00000371817 S100A1P23297 94 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 FAM83BQ5T0W9 1011 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 PPP2R3CQ969Q6 453 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 CTNNAL1Q9UBT7 734 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 PCDHGA3Q9Y5H0 932 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 TNFRSF21O75509 655 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 DGKIO75912 1065 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 SLC20A2Q08357 652 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 NFIL3Q16649 462 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 SCARA5Q6ZMJ2 495 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 SMARCAD1Q9H4L7 1026 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 RERGLQ9H628 205 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 CCDC59Q9P031 241 aaKnown RBP15.99■□□□□ 0.15
COL5A1-201ENST00000371817 ABCC4O15439 1325 aa15.99■□□□□ 0.15
COL5A1-201ENST00000371817 CPA2P48052 419 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 PEX5P50542 639 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 SLC10A5Q5PT55 438 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 TMEM35BQ8NCS4 154 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 WDR17Q8IZU2 1322 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 KCNK10P57789 538 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 CACNB1Q02641 598 aaPredicted RBP15.98■□□□□ 0.15
COL5A1-201ENST00000371817 TRIM72Q6ZMU5 477 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 TINF2Q9BSI4 451 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 VTA1Q9NP79 307 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 MYO3BQ8WXR4 1341 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 UBA6A0AVT1 1052 aaPredicted RBP15.98■□□□□ 0.15
COL5A1-201ENST00000371817 FCGR1AP12314 374 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 KCNB1Q14721 858 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 GPATCH4Q5T3I0 446 aaKnown RBP15.98■□□□□ 0.15
COL5A1-201ENST00000371817 JADE3Q92613 823 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 PTK7Q13308 1070 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 LRRC74BQ6ZQY2 392 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 UNC13DQ70J99 1090 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 RNFT2Q96EX2 444 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 PCMTD2Q9NV79 361 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 CLEC11AQ9Y240 323 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 TTC26A0AVF1 554 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 TRIM43BA6NCK2 446 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 A8MXQ7 604 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 O00370 1275 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 GSTT1P30711 240 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 BCAP31P51572 246 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 ZNF713Q8N859 430 aaPredicted RBP15.98■□□□□ 0.15
COL5A1-201ENST00000371817 UXS1Q8NBZ7 420 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 PGBD4Q96DM1 585 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 DNAJC3Q13217 504 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 COBLL1Q53SF7 1204 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 CDKL3Q8IVW4 592 aaPredicted RBP15.98■□□□□ 0.15
COL5A1-201ENST00000371817 CENPTQ96BT3 561 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 MAGEB18Q96M61 343 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 DMAP1Q9NPF5 467 aaPredicted RBP15.98■□□□□ 0.15
COL5A1-201ENST00000371817 GCKRQ14397 625 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 LCORLQ8N3X6 602 aa15.98■□□□□ 0.15
COL5A1-201ENST00000371817 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.98■□□□□ 0.15
COL5A1-201ENST00000371817 ZBTB39O15060 712 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 PRCPP42785 496 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 GRM1Q13255 1194 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 AKIRIN2Q53H80 203 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 TUBGCP4Q9UGJ1 667 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms