RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 ARL4AP40617 200 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 MAGEA8P43361 318 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 CDK17Q00537 523 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 ARHGEF16Q5VV41 709 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 CLEC4GQ6UXB4 293 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 FBXL13Q8NEE6 735 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 WDR60Q8WVS4 1066 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 ATG4AQ8WYN0 398 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 SYN2Q92777 582 aaPredicted RBP13.36□□□□□ -0.27
GPC4-201ENST00000370828 ATP6V1E2Q96A05 226 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 FAM111AQ96PZ2 611 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 SEPT9Q9UHD8 586 aaPredicted RBP13.36□□□□□ -0.27
GPC4-201ENST00000370828 ATP6V1G1O75348 118 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 KPNA2P52292 529 aaKnown RBP13.35□□□□□ -0.27
GPC4-201ENST00000370828 TMEM117Q9H0C3 514 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 MYLK2Q9H1R3 596 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 CRB1P82279 1406 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 KLHL2O95198 593 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 MYL2P10916 166 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 ANXA13P27216 316 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 MTA1Q13330 715 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 C16orf72Q14CZ0 275 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 SLC13A5Q86YT5 568 aaPredicted RBP13.35□□□□□ -0.27
GPC4-201ENST00000370828 MKNK1Q9BUB5 465 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 NACA2Q9H009 215 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 THAP2Q9H0W7 228 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 RAD21L1Q9H4I0 556 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 C20orf96Q9NUD7 363 aaPredicted RBP13.35□□□□□ -0.27
GPC4-201ENST00000370828 FOXP2O15409 715 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 STRNO43815 780 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 FOXO4P98177 505 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 PPIDQ08752 370 aaKnown RBP13.35□□□□□ -0.27
GPC4-201ENST00000370828 OASLQ15646 514 aaKnown RBP13.35□□□□□ -0.27
GPC4-201ENST00000370828 CHI3L2Q15782 390 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 ARMC3Q5W041 872 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 POTEAQ6S8J7 498 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 ZBTB8OSQ8IWT0 167 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 RIBC1Q8N443 379 aaPredicted RBP13.35□□□□□ -0.27
GPC4-201ENST00000370828 E2F7Q96AV8 911 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 SLC9A2Q9UBY0 812 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 PDXKO00764 312 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 SERPINB8P50452 374 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 GRM4Q14833 912 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 FIGNQ5HY92 759 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 CEP78Q5JTW2 689 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 ADCK1Q86TW2 530 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 CMTM5Q96DZ9 223 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 APEX2Q9UBZ4 518 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 GGA2Q9UJY4 613 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 APPL1Q9UKG1 709 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 PNMA3Q9UL41 463 aa13.35□□□□□ -0.27
GPC4-201ENST00000370828 WBP4O75554 376 aaKnown RBP13.34□□□□□ -0.27
GPC4-201ENST00000370828 IL10P22301 178 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 TFDP2Q14188 446 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 CDR2LQ86X02 465 aaPredicted RBP13.34□□□□□ -0.27
GPC4-201ENST00000370828 TMEM35BQ8NCS4 154 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 DDI1Q8WTU0 396 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 SLC38A10Q9HBR0 1119 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 BTG4Q9NY30 223 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 CYP39A1Q9NYL5 469 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 GOLGA8CPA6NN73 597 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 SARSP49591 514 aaKnown RBP13.34□□□□□ -0.27
GPC4-201ENST00000370828 PEX5P50542 639 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 QPCTQ16769 361 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 GORASP1Q9BQQ3 440 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 OSGEPQ9NPF4 335 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 DCP1AQ9NPI6 582 aaPredicted RBP13.34□□□□□ -0.27
GPC4-201ENST00000370828 SERPINB1P30740 379 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 COPAP53621 1224 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 ZNF200P98182 395 aaPredicted RBP13.34□□□□□ -0.27
GPC4-201ENST00000370828 ATP1A4Q13733 1029 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 RPAP3Q9H6T3 665 aaPredicted RBP13.34□□□□□ -0.27
GPC4-201ENST00000370828 FAM196BA6NMK8 535 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 SNX3O60493 162 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 PTDSS1P48651 473 aaKnown RBP13.34□□□□□ -0.27
GPC4-201ENST00000370828 FMO5P49326 533 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 KCTD19Q17RG1 926 aaPredicted RBP13.34□□□□□ -0.27
GPC4-201ENST00000370828 TMTC4Q5T4D3 741 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 TUBA3EQ6PEY2 450 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 PEX5LQ8IYB4 626 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 PPP2R3CQ969Q6 453 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 NCLNQ969V3 563 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 NGLY1Q96IV0 654 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 DACH2Q96NX9 599 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 DDX50Q9BQ39 737 aaKnown RBP13.34□□□□□ -0.27
GPC4-201ENST00000370828 KLHL4Q9C0H6 718 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 IP6K2Q9UHH9 426 aa13.34□□□□□ -0.27
GPC4-201ENST00000370828 HERC5Q9UII4 1024 aaKnown RBP13.34□□□□□ -0.27
GPC4-201ENST00000370828 ATP2B4P23634 1241 aa13.33□□□□□ -0.27
GPC4-201ENST00000370828 PRDX5P30044 214 aa13.33□□□□□ -0.27
GPC4-201ENST00000370828 SOX11P35716 441 aa13.33□□□□□ -0.27
GPC4-201ENST00000370828 OSTNP61366 133 aa13.33□□□□□ -0.27
GPC4-201ENST00000370828 NDUFA5Q16718 116 aa13.33□□□□□ -0.27
GPC4-201ENST00000370828 ZNF786Q8N393 782 aa13.33□□□□□ -0.27
GPC4-201ENST00000370828 GIPC2Q8TF65 315 aa13.33□□□□□ -0.27
GPC4-201ENST00000370828 ATXN2LQ8WWM7 1075 aaKnown RBP13.33□□□□□ -0.27
GPC4-201ENST00000370828 PBXIP1Q96AQ6 731 aa13.33□□□□□ -0.27
GPC4-201ENST00000370828 SENP7Q9BQF6 1050 aa13.33□□□□□ -0.27
GPC4-201ENST00000370828 WDR37Q9Y2I8 494 aa13.33□□□□□ -0.27
GPC4-201ENST00000370828 E2F8A0AVK6 867 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms