RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 NOSTRINQ8IVI9 506 aa16.27■□□□□ 0.2
LMO4-201ENST00000370542 UBALD2Q8IYN6 164 aa16.27■□□□□ 0.2
LMO4-201ENST00000370542 HACE1Q8IYU2 909 aa16.27■□□□□ 0.2
LMO4-201ENST00000370542 FMR1NBQ8N0W7 255 aaPredicted RBP16.27■□□□□ 0.2
LMO4-201ENST00000370542 FEZF2Q8TBJ5 459 aa16.27■□□□□ 0.2
LMO4-201ENST00000370542 KIAA1468Q9P260 1216 aa16.27■□□□□ 0.2
LMO4-201ENST00000370542 SORCS3Q9UPU3 1222 aa16.27■□□□□ 0.2
LMO4-201ENST00000370542 TADA3O75528 432 aa16.26■□□□□ 0.19
LMO4-201ENST00000370542 SMC2O95347 1197 aa16.26■□□□□ 0.19
LMO4-201ENST00000370542 ATP2B1P20020 1258 aa16.26■□□□□ 0.19
LMO4-201ENST00000370542 KLRC2P26717 231 aa16.26■□□□□ 0.19
LMO4-201ENST00000370542 HNRNPH2P55795 449 aaKnown RBP16.26■□□□□ 0.19
LMO4-201ENST00000370542 PDIA5Q14554 519 aa16.26■□□□□ 0.19
LMO4-201ENST00000370542 BRD3Q15059 726 aa16.26■□□□□ 0.19
LMO4-201ENST00000370542 ZNF174Q15697 407 aa16.26■□□□□ 0.19
LMO4-201ENST00000370542 CYP26C1Q6V0L0 522 aa16.26■□□□□ 0.19
LMO4-201ENST00000370542 TMC6Q7Z403 805 aa16.26■□□□□ 0.19
LMO4-201ENST00000370542 CABP7Q86V35 215 aa16.26■□□□□ 0.19
LMO4-201ENST00000370542 PLCD3Q8N3E9 789 aa16.26■□□□□ 0.19
LMO4-201ENST00000370542 GOLGA6L1Q8N7Z2 621 aa16.26■□□□□ 0.19
LMO4-201ENST00000370542 TMEM105Q8N8V8 129 aa16.26■□□□□ 0.19
LMO4-201ENST00000370542 KREMEN2Q8NCW0 462 aa16.26■□□□□ 0.19
LMO4-201ENST00000370542 ERMNQ8TAM6 284 aa16.26■□□□□ 0.19
LMO4-201ENST00000370542 GOLGA5Q8TBA6 731 aa16.26■□□□□ 0.19
LMO4-201ENST00000370542 HDAC7Q8WUI4 952 aa16.26■□□□□ 0.19
LMO4-201ENST00000370542 BSNDQ8WZ55 320 aa16.26■□□□□ 0.19
LMO4-201ENST00000370542 CCDC43Q96MW1 224 aaKnown RBP16.26■□□□□ 0.19
LMO4-201ENST00000370542 CCDC113Q9H0I3 377 aa16.26■□□□□ 0.19
LMO4-201ENST00000370542 C2orf40Q9H1Z8 148 aa16.26■□□□□ 0.19
LMO4-201ENST00000370542 PRG3Q9Y2Y8 225 aaPredicted RBP16.26■□□□□ 0.19
LMO4-201ENST00000370542 TPRP12270 2363 aaKnown RBP16.26■□□□□ 0.19
LMO4-201ENST00000370542 TTLL13PA6NNM8 815 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 TEX28O15482 410 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 ARHGAP6O43182 974 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 URODP06132 367 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 WEE2P0C1S8 567 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 AKAP5P24588 427 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 CA8P35219 290 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 OR1G1P47890 313 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 ME1P48163 572 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 GRIK3Q13003 919 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 ECM1Q16610 540 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 TTC38Q5R3I4 469 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 POTEGQ6S5H5 508 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 PADI6Q6TGC4 694 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 TMC5Q6UXY8 1006 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 ELOA2Q8IYF1 753 aaPredicted RBP16.25■□□□□ 0.19
LMO4-201ENST00000370542 IGSF22Q8N9C0 903 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 RABGGTAQ92696 567 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 COLEC11Q9BWP8 271 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 TRIM6Q9C030 488 aaPredicted RBP16.25■□□□□ 0.19
LMO4-201ENST00000370542 ARFGAP3Q9NP61 516 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 FNIP2Q9P278 1114 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 ACACBO00763 2458 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 MYH15Q9Y2K3 1946 aa16.25■□□□□ 0.19
LMO4-201ENST00000370542 C2orf16Q68DN1 1984 aa16.24■□□□□ 0.19
LMO4-201ENST00000370542 MTCL1Q9Y4B5 1905 aaKnown RBP16.24■□□□□ 0.19
LMO4-201ENST00000370542 ERICH4A6NGS2 130 aa16.24■□□□□ 0.19
LMO4-201ENST00000370542 LRRIQ4A6NIV6 560 aa16.24■□□□□ 0.19
LMO4-201ENST00000370542 F8W810 466 aa16.24■□□□□ 0.19
LMO4-201ENST00000370542 ACKR2O00590 384 aa16.24■□□□□ 0.19
LMO4-201ENST00000370542 NPTXRO95502 500 aa16.24■□□□□ 0.19
LMO4-201ENST00000370542 ADH1AP07327 375 aa16.24■□□□□ 0.19
LMO4-201ENST00000370542 NAMPTP43490 491 aa16.24■□□□□ 0.19
LMO4-201ENST00000370542 GLUD2P49448 558 aa16.24■□□□□ 0.19
LMO4-201ENST00000370542 TOB1P50616 345 aaPredicted RBP16.24■□□□□ 0.19
LMO4-201ENST00000370542 MTMR3Q13615 1198 aa16.24■□□□□ 0.19
LMO4-201ENST00000370542 PUM1Q14671 1186 aaKnown RBP eCLIP16.24■□□□□ 0.19
LMO4-201ENST00000370542 NAB2Q15742 525 aa16.24■□□□□ 0.19
LMO4-201ENST00000370542 HAUS3Q68CZ6 603 aa16.24■□□□□ 0.19
LMO4-201ENST00000370542 LILRA6Q6PI73 481 aa16.24■□□□□ 0.19
LMO4-201ENST00000370542 CDR2LQ86X02 465 aaPredicted RBP16.24■□□□□ 0.19
LMO4-201ENST00000370542 ZBTB8OSQ8IWT0 167 aa16.24■□□□□ 0.19
LMO4-201ENST00000370542 GPR62Q9BZJ7 368 aa16.24■□□□□ 0.19
LMO4-201ENST00000370542 XPO4Q9C0E2 1151 aaKnown RBP16.24■□□□□ 0.19
LMO4-201ENST00000370542 RASSF4Q9H2L5 321 aa16.24■□□□□ 0.19
LMO4-201ENST00000370542 PDZD7Q9H5P4 517 aa16.24■□□□□ 0.19
LMO4-201ENST00000370542 IFNKQ9P0W0 207 aa16.24■□□□□ 0.19
LMO4-201ENST00000370542 DPP7Q9UHL4 492 aa16.24■□□□□ 0.19
LMO4-201ENST00000370542 FRYLO94915 3013 aa16.24■□□□□ 0.19
LMO4-201ENST00000370542 PTGESO14684 152 aa16.23■□□□□ 0.19
LMO4-201ENST00000370542 N4BP3O15049 544 aa16.23■□□□□ 0.19
LMO4-201ENST00000370542 EDN1P05305 212 aa16.23■□□□□ 0.19
LMO4-201ENST00000370542 SSBP05455 408 aaKnown RBP eCLIP16.23■□□□□ 0.19
LMO4-201ENST00000370542 SP100P23497 879 aaPredicted RBP16.23■□□□□ 0.19
LMO4-201ENST00000370542 ARID5BQ14865 1188 aa16.23■□□□□ 0.19
LMO4-201ENST00000370542 SF3A1Q15459 793 aaKnown RBP16.23■□□□□ 0.19
LMO4-201ENST00000370542 MAPK6Q16659 721 aa16.23■□□□□ 0.19
LMO4-201ENST00000370542 ARMCX5Q6P1M9 558 aa16.23■□□□□ 0.19
LMO4-201ENST00000370542 FUT10Q6P4F1 479 aa16.23■□□□□ 0.19
LMO4-201ENST00000370542 MAEAQ7L5Y9 396 aa16.23■□□□□ 0.19
LMO4-201ENST00000370542 TDRD5Q8NAT2 981 aaKnown RBP16.23■□□□□ 0.19
LMO4-201ENST00000370542 GOLPH3LQ9H4A5 285 aa16.23■□□□□ 0.19
LMO4-201ENST00000370542 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.23■□□□□ 0.19
LMO4-201ENST00000370542 ADAM28Q9UKQ2 775 aa16.23■□□□□ 0.19
LMO4-201ENST00000370542 STK24Q9Y6E0 443 aa16.23■□□□□ 0.19
LMO4-201ENST00000370542 ARHGEF35A5YM69 484 aa16.22■□□□□ 0.19
LMO4-201ENST00000370542 CASQ1P31415 396 aa16.22■□□□□ 0.19
LMO4-201ENST00000370542 TUSC3Q13454 348 aa16.22■□□□□ 0.19
LMO4-201ENST00000370542 PPP2R5AQ15172 486 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms