RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 RPL17P18621 184 aaKnown RBP22.38■■□□□ 1.17
SMNDC1-201ENST00000369592 LRPAP1P30533 357 aa22.38■■□□□ 1.17
SMNDC1-201ENST00000369592 CREMQ03060 361 aa22.38■■□□□ 1.17
SMNDC1-201ENST00000369592 HERC4Q5GLZ8 1057 aaPredicted RBP22.38■■□□□ 1.17
SMNDC1-201ENST00000369592 RARS2Q5T160 578 aaKnown RBP22.38■■□□□ 1.17
SMNDC1-201ENST00000369592 L1TD1Q5T7N2 865 aaKnown RBP22.38■■□□□ 1.17
SMNDC1-201ENST00000369592 STAMQ92783 540 aa22.38■■□□□ 1.17
SMNDC1-201ENST00000369592 CHAMP1Q96JM3 812 aa22.38■■□□□ 1.17
SMNDC1-201ENST00000369592 C7orf25Q9BPX7 421 aa22.38■■□□□ 1.17
SMNDC1-201ENST00000369592 POMKQ9H5K3 350 aa22.38■■□□□ 1.17
SMNDC1-201ENST00000369592 MRPL44Q9H9J2 332 aaKnown RBP22.38■■□□□ 1.17
SMNDC1-201ENST00000369592 PANK4Q9NVE7 773 aa22.38■■□□□ 1.17
SMNDC1-201ENST00000369592 DOCK6Q96HP0 2047 aa22.38■■□□□ 1.17
SMNDC1-201ENST00000369592 ADAM12O43184 909 aa22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 TGM5O43548 720 aa22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 GLUD1P00367 558 aa22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 MYBP10242 640 aa22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 CYP3A5P20815 502 aa22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 MTHFRP42898 656 aa22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 BRCC3P46736 316 aa22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 ME1P48163 572 aa22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 EHHADHQ08426 723 aa22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 SLFN12LQ6IEE8 588 aa22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 CES5AQ6NT32 575 aa22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 CRELD2Q6UXH1 353 aaPredicted RBP22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 RNF135Q8IUD6 432 aa22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 TMEM130Q8N3G9 435 aa22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 LEO1Q8WVC0 666 aaPredicted RBP22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 DHX58Q96C10 678 aa22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 MSTO1Q9BUK6 570 aa22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 MAGEF1Q9HAY2 307 aa22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 MAN1C1Q9NR34 630 aa22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 TBC1D7Q9P0N9 293 aa22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 MTRRQ9UBK8 725 aa22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 TUBGCP4Q9UGJ1 667 aa22.37■■□□□ 1.17
SMNDC1-201ENST00000369592 POLR2DO15514 142 aaKnown RBP22.36■■□□□ 1.17
SMNDC1-201ENST00000369592 TBC1D4O60343 1298 aa22.36■■□□□ 1.17
SMNDC1-201ENST00000369592 IDEP14735 1019 aa22.36■■□□□ 1.17
SMNDC1-201ENST00000369592 ALCAMQ13740 583 aa22.36■■□□□ 1.17
SMNDC1-201ENST00000369592 MRPL58Q14197 206 aaKnown RBP22.36■■□□□ 1.17
SMNDC1-201ENST00000369592 PSMD5Q16401 504 aa22.36■■□□□ 1.17
SMNDC1-201ENST00000369592 RSPO2Q6UXX9 243 aaPredicted RBP22.36■■□□□ 1.17
SMNDC1-201ENST00000369592 TMC5Q6UXY8 1006 aa22.36■■□□□ 1.17
SMNDC1-201ENST00000369592 C15orf39Q6ZRI6 1047 aa22.36■■□□□ 1.17
SMNDC1-201ENST00000369592 RIPOR3Q96MK2 946 aa22.36■■□□□ 1.17
SMNDC1-201ENST00000369592 LRRC27Q9C0I9 530 aa22.36■■□□□ 1.17
SMNDC1-201ENST00000369592 PLEKHA4Q9H4M7 779 aa22.36■■□□□ 1.17
SMNDC1-201ENST00000369592 PCDHB13Q9Y5F0 798 aa22.36■■□□□ 1.17
SMNDC1-201ENST00000369592 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.36■■□□□ 1.17
SMNDC1-201ENST00000369592 BACE2Q9Y5Z0 518 aa22.36■■□□□ 1.17
SMNDC1-201ENST00000369592 TECTAO75443 2155 aa22.36■■□□□ 1.17
SMNDC1-201ENST00000369592 DOCK8Q8NF50 2099 aa22.35■■□□□ 1.17
SMNDC1-201ENST00000369592 I3L4J1 428 aa22.35■■□□□ 1.17
SMNDC1-201ENST00000369592 TRAPPC3O43617 180 aa22.35■■□□□ 1.17
SMNDC1-201ENST00000369592 WEE2P0C1S8 567 aa22.35■■□□□ 1.17
SMNDC1-201ENST00000369592 TKTP29401 623 aaKnown RBP22.35■■□□□ 1.17
SMNDC1-201ENST00000369592 MATR3P43243 847 aaKnown RBP eCLIP22.35■■□□□ 1.17
SMNDC1-201ENST00000369592 AARSP49588 968 aaKnown RBP eCLIP22.35■■□□□ 1.17
SMNDC1-201ENST00000369592 NHLH1Q02575 133 aa22.35■■□□□ 1.17
SMNDC1-201ENST00000369592 PDXDC1Q6P996 788 aa22.35■■□□□ 1.17
SMNDC1-201ENST00000369592 CYP26C1Q6V0L0 522 aa22.35■■□□□ 1.17
SMNDC1-201ENST00000369592 CD302Q8IX05 232 aa22.35■■□□□ 1.17
SMNDC1-201ENST00000369592 CCDC65Q8IXS2 484 aa22.35■■□□□ 1.17
SMNDC1-201ENST00000369592 GLIS3Q8NEA6 775 aa22.35■■□□□ 1.17
SMNDC1-201ENST00000369592 ZNF707Q96C28 371 aaPredicted RBP22.35■■□□□ 1.17
SMNDC1-201ENST00000369592 SUSD3Q96L08 255 aa22.35■■□□□ 1.17
SMNDC1-201ENST00000369592 ACCSQ96QU6 501 aa22.35■■□□□ 1.17
SMNDC1-201ENST00000369592 RPF1Q9H9Y2 349 aaKnown RBP22.35■■□□□ 1.17
SMNDC1-201ENST00000369592 FBXW11Q9UKB1 542 aa22.35■■□□□ 1.17
SMNDC1-201ENST00000369592 AGO2Q9UKV8 859 aaKnown RBP22.35■■□□□ 1.17
SMNDC1-201ENST00000369592 UBQLN1Q9UMX0 589 aaKnown RBP22.35■■□□□ 1.17
SMNDC1-201ENST00000369592 FAM237AA0A1B0GTK4 181 aa22.34■■□□□ 1.17
SMNDC1-201ENST00000369592 HOXD13P35453 343 aa22.34■■□□□ 1.17
SMNDC1-201ENST00000369592 PPP2R3AQ06190 1150 aa22.34■■□□□ 1.17
SMNDC1-201ENST00000369592 SPAG1Q07617 926 aa22.34■■□□□ 1.17
SMNDC1-201ENST00000369592 RAB33AQ14088 237 aa22.34■■□□□ 1.17
SMNDC1-201ENST00000369592 ATAT1Q5SQI0 421 aa22.34■■□□□ 1.17
SMNDC1-201ENST00000369592 SPATA1Q5VX52 437 aa22.34■■□□□ 1.17
SMNDC1-201ENST00000369592 ADALQ6DHV7 355 aa22.34■■□□□ 1.17
SMNDC1-201ENST00000369592 EPM2AIP1Q7L775 607 aaPredicted RBP22.34■■□□□ 1.17
SMNDC1-201ENST00000369592 CEP57Q86XR8 500 aa22.34■■□□□ 1.17
SMNDC1-201ENST00000369592 PALB2Q86YC2 1186 aa22.34■■□□□ 1.17
SMNDC1-201ENST00000369592 KIF12Q96FN5 646 aa22.34■■□□□ 1.17
SMNDC1-201ENST00000369592 RPGRIP1Q96KN7 1286 aa22.34■■□□□ 1.17
SMNDC1-201ENST00000369592 DPP7Q9UHL4 492 aa22.34■■□□□ 1.17
SMNDC1-201ENST00000369592 KCNH3Q9ULD8 1083 aa22.34■■□□□ 1.17
SMNDC1-201ENST00000369592 HPSEQ9Y251 543 aa22.34■■□□□ 1.17
SMNDC1-201ENST00000369592 DERAQ9Y315 318 aa22.34■■□□□ 1.17
SMNDC1-201ENST00000369592 SCN1AP35498 2009 aa22.34■■□□□ 1.17
SMNDC1-201ENST00000369592 SYN3O14994 580 aa22.33■■□□□ 1.17
SMNDC1-201ENST00000369592 DCXO43602 365 aa22.33■■□□□ 1.17
SMNDC1-201ENST00000369592 GCNT3O95395 438 aa22.33■■□□□ 1.17
SMNDC1-201ENST00000369592 SPATA31D3P0C874 917 aa22.33■■□□□ 1.17
SMNDC1-201ENST00000369592 ALADP13716 330 aa22.33■■□□□ 1.17
SMNDC1-201ENST00000369592 CMA1P23946 247 aa22.33■■□□□ 1.17
SMNDC1-201ENST00000369592 ACOT2P49753 483 aa22.33■■□□□ 1.17
SMNDC1-201ENST00000369592 AMPD3Q01432 767 aa22.33■■□□□ 1.17
SMNDC1-201ENST00000369592 POSTNQ15063 836 aa22.33■■□□□ 1.17
SMNDC1-201ENST00000369592 SPATA31D4Q6ZUB0 917 aa22.33■■□□□ 1.17
SMNDC1-201ENST00000369592 KREMEN2Q8NCW0 462 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms