RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 SERTAD1Q9UHV2 236 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 CPSF3Q9UKF6 684 aaKnown RBP10.74□□□□□ -0.69
CD48-202ENST00000368046 BARX2Q9UMQ3 279 aaPredicted RBP10.74□□□□□ -0.69
CD48-202ENST00000368046 HPSEQ9Y251 543 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 FAM237AA0A1B0GTK4 181 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 PVALEFA0A1B0GWK0 134 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 A0A1W2PQ27 194 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 A0A1W2PQ64 194 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 A0A1W2PQD8 194 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 LACTBL1A8MY62 500 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 C2CD2LO14523 706 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 MEFVO15553 781 aaPredicted RBP10.73□□□□□ -0.69
CD48-202ENST00000368046 FAM189A1O60320 539 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 KIF4AO95239 1232 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 LDHAP00338 332 aaKnown RBP10.73□□□□□ -0.69
CD48-202ENST00000368046 CYP3A5P20815 502 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 ADSSP30520 456 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 TNFSF9P41273 254 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 AFMP43652 599 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 ASIC1P78348 528 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 SOX4Q06945 474 aaPredicted RBP10.73□□□□□ -0.69
CD48-202ENST00000368046 SMAD4Q13485 552 aaKnown RBP10.73□□□□□ -0.69
CD48-202ENST00000368046 SMAD2Q15796 467 aaKnown RBP10.73□□□□□ -0.69
CD48-202ENST00000368046 CLUL1Q15846 466 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 TPRNQ4KMQ1 711 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 FAM171A1Q5VUB5 890 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 STXBP4Q6ZWJ1 553 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 UNC13DQ70J99 1090 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 CEP57Q86XR8 500 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 SYCP3Q8IZU3 236 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 SMRP1Q8NCR6 262 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 ZNF507Q8TCN5 953 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 POMGNT1Q8WZA1 660 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 KCTD12Q96CX2 325 aaKnown RBP10.73□□□□□ -0.69
CD48-202ENST00000368046 TTPALQ9BTX7 342 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 ASB7Q9H672 318 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 GOLGA2P5Q9HBQ8 144 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 FNIP2Q9P278 1114 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 PRKAG3Q9UGI9 489 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 AGO2Q9UKV8 859 aaKnown RBP10.73□□□□□ -0.69
CD48-202ENST00000368046 PCDHGA4Q9Y5G9 962 aa10.73□□□□□ -0.69
CD48-202ENST00000368046 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.73□□□□□ -0.69
CD48-202ENST00000368046 SF3B1O75533 1304 aaKnown RBP eCLIP10.73□□□□□ -0.69
CD48-202ENST00000368046 KIAA1671Q9BY89 1806 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 PLXNA4Q9HCM2 1894 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 VCANP13611 3396 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 TISP43B9A030 160 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 TNFRSF10AO00220 468 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 PODXLO00592 558 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 TEX28O15482 410 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 XPOTO43592 962 aaKnown RBP10.72□□□□□ -0.69
CD48-202ENST00000368046 PRPF6O94906 941 aaKnown RBP10.72□□□□□ -0.69
CD48-202ENST00000368046 ADH1AP07327 375 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 CXCL8P10145 99 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 MYBP10242 640 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 PFKFB1P16118 471 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 EPCAMP16422 314 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 GARTP22102 1010 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 IGFBP6P24592 240 aaPredicted RBP10.72□□□□□ -0.69
CD48-202ENST00000368046 ACOT2P49753 483 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 CLCN4P51793 760 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 CASP5P51878 434 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 ITIH3Q06033 890 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 PPP2R3AQ06190 1150 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 CUL4BQ13620 913 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 ENOX2Q16206 610 aaKnown RBP10.72□□□□□ -0.69
CD48-202ENST00000368046 PDXDC1Q6P996 788 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 SYCE2Q6PIF2 218 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 CD300LGQ6UXG3 332 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 LNX1Q8TBB1 728 aaPredicted RBP10.72□□□□□ -0.69
CD48-202ENST00000368046 HASPINQ8TF76 798 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 HDAC7Q8WUI4 952 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 RIN2Q8WYP3 895 aaPredicted RBP10.72□□□□□ -0.69
CD48-202ENST00000368046 C18orf25Q96B23 403 aaPredicted RBP10.72□□□□□ -0.69
CD48-202ENST00000368046 PAGE5Q96GU1 130 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 B3GALT6Q96L58 329 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 BLZF1Q9H2G9 400 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 IKZF4Q9H2S9 585 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 ADAM7Q9H2U9 754 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 DPP7Q9UHL4 492 aa10.72□□□□□ -0.69
CD48-202ENST00000368046 UBQLN1Q9UMX0 589 aaKnown RBP10.72□□□□□ -0.69
CD48-202ENST00000368046 HRO43593 1189 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 ACTN4O43707 911 aaKnown RBP10.71□□□□□ -0.69
CD48-202ENST00000368046 MYL1P05976 194 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 FGFR3P22607 806 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 CASP1P29466 404 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 SYKP43405 635 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 BRCC3P46736 316 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 NDUFA8P51970 172 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 CREMQ03060 361 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 SPAG1Q07617 926 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 EHHADHQ08426 723 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 PSMD2Q13200 908 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 RTP2Q5QGT7 225 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 FAM26FQ5R3K3 315 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 ZBTB41Q5SVQ8 909 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 CES5AQ6NT32 575 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 LILRA6Q6PI73 481 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 CRELD2Q6UXH1 353 aaPredicted RBP10.71□□□□□ -0.69
CD48-202ENST00000368046 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms