RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 NBL1P41271 181 aa16.2■□□□□ 0.18
CTSD-202ENST00000367196 SOX4Q06945 474 aaPredicted RBP16.2■□□□□ 0.18
CTSD-202ENST00000367196 VARS2Q5ST30 1063 aaKnown RBP16.2■□□□□ 0.18
CTSD-202ENST00000367196 LARP1BQ659C4 914 aaKnown RBP16.2■□□□□ 0.18
CTSD-202ENST00000367196 SLC8B1Q6J4K2 584 aa16.2■□□□□ 0.18
CTSD-202ENST00000367196 C3orf58Q8NDZ4 430 aa16.2■□□□□ 0.18
CTSD-202ENST00000367196 APPL2Q8NEU8 664 aa16.2■□□□□ 0.18
CTSD-202ENST00000367196 GPR152Q8TDT2 470 aa16.2■□□□□ 0.18
CTSD-202ENST00000367196 KCNN1Q92952 543 aa16.2■□□□□ 0.18
CTSD-202ENST00000367196 SHDQ96IW2 340 aa16.2■□□□□ 0.18
CTSD-202ENST00000367196 PNMA5Q96PV4 448 aa16.2■□□□□ 0.18
CTSD-202ENST00000367196 PLEKHA5Q9HAU0 1116 aa16.2■□□□□ 0.18
CTSD-202ENST00000367196 ARHGEF3Q9NR81 526 aa16.2■□□□□ 0.18
CTSD-202ENST00000367196 CA14Q9ULX7 337 aa16.2■□□□□ 0.18
CTSD-202ENST00000367196 I3L4J1 428 aa16.19■□□□□ 0.18
CTSD-202ENST00000367196 PRRG1O14668 218 aa16.19■□□□□ 0.18
CTSD-202ENST00000367196 XPOTO43592 962 aaKnown RBP16.19■□□□□ 0.18
CTSD-202ENST00000367196 MCM4P33991 863 aa16.19■□□□□ 0.18
CTSD-202ENST00000367196 BRCC3P46736 316 aa16.19■□□□□ 0.18
CTSD-202ENST00000367196 ROR1Q01973 937 aa16.19■□□□□ 0.18
CTSD-202ENST00000367196 MCL1Q07820 350 aa16.19■□□□□ 0.18
CTSD-202ENST00000367196 ZNF280DQ6N043 979 aa16.19■□□□□ 0.18
CTSD-202ENST00000367196 PHLDB3Q6NSJ2 640 aa16.19■□□□□ 0.18
CTSD-202ENST00000367196 CD300LGQ6UXG3 332 aa16.19■□□□□ 0.18
CTSD-202ENST00000367196 DTWD2Q8NBA8 298 aa16.19■□□□□ 0.18
CTSD-202ENST00000367196 ZNF461Q8TAF7 563 aa16.19■□□□□ 0.18
CTSD-202ENST00000367196 FGF13Q92913 245 aa16.19■□□□□ 0.18
CTSD-202ENST00000367196 ZMAT2Q96NC0 199 aaKnown RBP16.19■□□□□ 0.18
CTSD-202ENST00000367196 TSPAN18Q96SJ8 248 aa16.19■□□□□ 0.18
CTSD-202ENST00000367196 PLIN2Q99541 437 aa16.19■□□□□ 0.18
CTSD-202ENST00000367196 TBC1D17Q9HA65 648 aa16.19■□□□□ 0.18
CTSD-202ENST00000367196 MAFFQ9ULX9 164 aa16.19■□□□□ 0.18
CTSD-202ENST00000367196 MYH15Q9Y2K3 1946 aa16.19■□□□□ 0.18
CTSD-202ENST00000367196 KRBA1A5PL33 1030 aa16.18■□□□□ 0.18
CTSD-202ENST00000367196 HNRNPDLO14979 420 aaKnown RBP16.18■□□□□ 0.18
CTSD-202ENST00000367196 CLTAP09496 248 aa16.18■□□□□ 0.18
CTSD-202ENST00000367196 MARCKSP29966 332 aaPredicted RBP16.18■□□□□ 0.18
CTSD-202ENST00000367196 LONP1P36776 959 aaKnown RBP16.18■□□□□ 0.18
CTSD-202ENST00000367196 LIG4P49917 911 aa16.18■□□□□ 0.18
CTSD-202ENST00000367196 NCKAP1LP55160 1127 aa16.18■□□□□ 0.18
CTSD-202ENST00000367196 PFKPQ01813 784 aa16.18■□□□□ 0.18
CTSD-202ENST00000367196 PPP2R3AQ06190 1150 aa16.18■□□□□ 0.18
CTSD-202ENST00000367196 TPGS2Q68CL5 300 aa16.18■□□□□ 0.18
CTSD-202ENST00000367196 ELMOD1Q8N336 334 aa16.18■□□□□ 0.18
CTSD-202ENST00000367196 SUSD3Q96L08 255 aa16.18■□□□□ 0.18
CTSD-202ENST00000367196 OXCT2Q9BYC2 517 aaPredicted RBP16.18■□□□□ 0.18
CTSD-202ENST00000367196 PARVGQ9HBI0 331 aa16.18■□□□□ 0.18
CTSD-202ENST00000367196 AVENQ9NQS1 362 aaPredicted RBP16.18■□□□□ 0.18
CTSD-202ENST00000367196 MRPS23Q9Y3D9 190 aaKnown RBP16.18■□□□□ 0.18
CTSD-202ENST00000367196 DOCK6Q96HP0 2047 aa16.18■□□□□ 0.18
CTSD-202ENST00000367196 USP34Q70CQ2 3546 aa16.17■□□□□ 0.18
CTSD-202ENST00000367196 ARHGEF37A1IGU5 675 aa16.17■□□□□ 0.18
CTSD-202ENST00000367196 K7ENM7 598 aa16.17■□□□□ 0.18
CTSD-202ENST00000367196 ABLIM3O94929 683 aa16.17■□□□□ 0.18
CTSD-202ENST00000367196 FAM13AO94988 1023 aa16.17■□□□□ 0.18
CTSD-202ENST00000367196 KRT18P05783 430 aaKnown RBP16.17■□□□□ 0.18
CTSD-202ENST00000367196 ATF2P15336 505 aa16.17■□□□□ 0.18
CTSD-202ENST00000367196 PTPN2P17706 415 aa16.17■□□□□ 0.18
CTSD-202ENST00000367196 PDCP20941 246 aa16.17■□□□□ 0.18
CTSD-202ENST00000367196 NTHL1P78549 312 aa16.17■□□□□ 0.18
CTSD-202ENST00000367196 CTXN3Q4LDR2 81 aa16.17■□□□□ 0.18
CTSD-202ENST00000367196 HAUS6Q7Z4H7 955 aa16.17■□□□□ 0.18
CTSD-202ENST00000367196 GPBP1Q86WP2 473 aa16.17■□□□□ 0.18
CTSD-202ENST00000367196 TCEAL8Q8IYN2 117 aa16.17■□□□□ 0.18
CTSD-202ENST00000367196 FGF14Q92915 247 aa16.17■□□□□ 0.18
CTSD-202ENST00000367196 NKD2Q969F2 451 aaPredicted RBP16.17■□□□□ 0.18
CTSD-202ENST00000367196 ZBTB45Q96K62 511 aaPredicted RBP16.17■□□□□ 0.18
CTSD-202ENST00000367196 REEP2Q9BRK0 252 aa16.17■□□□□ 0.18
CTSD-202ENST00000367196 GDE1Q9NZC3 331 aa16.17■□□□□ 0.18
CTSD-202ENST00000367196 UBQLN1Q9UMX0 589 aaKnown RBP16.17■□□□□ 0.18
CTSD-202ENST00000367196 MYO15AQ9UKN7 3530 aa16.17■□□□□ 0.18
CTSD-202ENST00000367196 ZFHX2Q9C0A1 2572 aaPredicted RBP16.16■□□□□ 0.18
CTSD-202ENST00000367196 WDR27A2RRH5 827 aa16.16■□□□□ 0.18
CTSD-202ENST00000367196 PI15O43692 258 aa16.16■□□□□ 0.18
CTSD-202ENST00000367196 TBCAO75347 108 aaKnown RBP16.16■□□□□ 0.18
CTSD-202ENST00000367196 CD2BP2O95400 341 aaKnown RBP16.16■□□□□ 0.18
CTSD-202ENST00000367196 RHOP08100 348 aa16.16■□□□□ 0.18
CTSD-202ENST00000367196 CXCL8P10145 99 aa16.16■□□□□ 0.18
CTSD-202ENST00000367196 CYP3A5P20815 502 aa16.16■□□□□ 0.18
CTSD-202ENST00000367196 ANGPT1Q15389 498 aa16.16■□□□□ 0.18
CTSD-202ENST00000367196 SLC10A6Q3KNW5 377 aa16.16■□□□□ 0.18
CTSD-202ENST00000367196 PARM1Q6UWI2 310 aa16.16■□□□□ 0.18
CTSD-202ENST00000367196 RSPO2Q6UXX9 243 aaPredicted RBP16.16■□□□□ 0.18
CTSD-202ENST00000367196 NPAS3Q8IXF0 933 aa16.16■□□□□ 0.18
CTSD-202ENST00000367196 MYCT1Q8N699 235 aa16.16■□□□□ 0.18
CTSD-202ENST00000367196 ITFG1Q8TB96 612 aa16.16■□□□□ 0.18
CTSD-202ENST00000367196 C18orf25Q96B23 403 aaPredicted RBP16.16■□□□□ 0.18
CTSD-202ENST00000367196 TBC1D32Q96NH3 1257 aa16.16■□□□□ 0.18
CTSD-202ENST00000367196 CYP4F11Q9HBI6 524 aa16.16■□□□□ 0.18
CTSD-202ENST00000367196 DNMT3BQ9UBC3 853 aaKnown RBP16.16■□□□□ 0.18
CTSD-202ENST00000367196 PCDHB8Q9UN66 801 aa16.16■□□□□ 0.18
CTSD-202ENST00000367196 SIT1Q9Y3P8 196 aa16.16■□□□□ 0.18
CTSD-202ENST00000367196 PRR23AA6NEV1 266 aa16.15■□□□□ 0.18
CTSD-202ENST00000367196 ZNF197O14709 1029 aa16.15■□□□□ 0.18
CTSD-202ENST00000367196 CPB1P15086 417 aa16.15■□□□□ 0.18
CTSD-202ENST00000367196 PAX3P23760 479 aa16.15■□□□□ 0.18
CTSD-202ENST00000367196 IGFBP6P24592 240 aaPredicted RBP16.15■□□□□ 0.18
CTSD-202ENST00000367196 LRPAP1P30533 357 aa16.15■□□□□ 0.18
CTSD-202ENST00000367196 ZNF131P52739 623 aa16.15■□□□□ 0.18
CTSD-202ENST00000367196 ARPP19P56211 112 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms