RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 TDP2O95551 362 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 MAGOHP61326 146 aaKnown RBP16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 LMBRD2Q68DH5 695 aaPredicted RBP16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 LRRC8BQ6P9F7 803 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 SYDE1Q6ZW31 735 aaPredicted RBP16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 WWP1Q9H0M0 922 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 AKR1B1P15121 316 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 CDC27P30260 824 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 SGSM1Q2NKQ1 1148 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 HES6Q96HZ4 224 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 GOLGA8TH3BQL2 631 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 FAM107AO95990 144 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 FCGRTP55899 365 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 CATSPER1Q8NEC5 780 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 NEDD1Q8NHV4 660 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 CALML6Q8TD86 181 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 C1orf54Q8WWF1 131 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 ECT2Q9H8V3 914 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 KDM6AO15550 1401 aaPredicted RBP16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 PPP2R2AP63151 447 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 HIST2H2ACQ16777 129 aaPredicted RBP16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 HIST2H2AA3Q6FI13 130 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 ZNF513Q8N8E2 541 aaPredicted RBP16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 HSPBP1Q9NZL4 362 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 HDAC6Q9UBN7 1215 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 FOXP2O15409 715 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 CENPAP49450 140 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 CLCN6P51797 869 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 MRPS25P82663 173 aaKnown RBP16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 TWF1Q12792 350 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 NCAPHQ15003 741 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 SARM1Q6SZW1 724 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 AURKCQ9UQB9 309 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 SUPT3HB4E1H0 165 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 STAG3L1P0CL83 205 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 RNF180Q86T96 592 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 AGR3Q8TD06 166 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 OSBPL9Q96SU4 736 aa16.5■□□□□ 0.23
NUCKS1-201ENST00000367142 CEP170Q5SW79 1584 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 PDXKO00764 312 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 HNRNPRO43390 633 aaKnown RBP16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 ORC4O43929 436 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 C16orf72Q14CZ0 275 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 CENPPQ6IPU0 288 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 CDK12Q9NYV4 1490 aaPredicted RBP16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 CCDC78A2IDD5 438 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 CYP26A1O43174 497 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 CHGBP05060 677 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 RGS7P49802 495 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 TADA1Q96BN2 335 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 SENP7Q9BQF6 1050 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 RFX7Q2KHR2 1363 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 SERPINB10P48595 397 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 TMEM132BQ14DG7 1078 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 ALX1Q15699 326 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 LRRC23Q53EV4 343 aaPredicted RBP16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 TMEM143Q96AN5 459 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 ARL8AQ96BM9 186 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 DTNAQ9Y4J8 743 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 PDGFRAP16234 1089 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 NUDT12Q9BQG2 462 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 COPG1Q9Y678 874 aaKnown RBP16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 CYP19A1P11511 503 aaPredicted RBP16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 SCP2P22307 547 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 SERPINB4P48594 390 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 EMC2Q15006 297 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 GPRC5AQ8NFJ5 357 aa16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 GJD4Q96KN9 370 aaPredicted RBP16.49■□□□□ 0.23
NUCKS1-201ENST00000367142 APOA1P02647 267 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 CARSP49589 748 aaKnown RBP16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 DGKDQ16760 1214 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 STRIP1Q5VSL9 837 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 TDRD10Q5VZ19 366 aaKnown RBP16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 AGAP3Q96P47 875 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 MRPL28Q13084 256 aaKnown RBP16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 STAT4Q14765 748 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 HS6ST3Q8IZP7 471 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 BPIFA3Q9BQP9 254 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 CCL15-CCL14A0A0B4J2E2 113 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 H0Y626 953 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 H2AFYO75367 372 aaKnown RBP16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 TRIM16O95361 564 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 BAATQ14032 418 aaPredicted RBP16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 CCL15Q16663 113 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 CACNA2D2Q9NY47 1150 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 SOAT1P35610 550 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 USP10Q14694 798 aaKnown RBP16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 BBS7Q8IWZ6 715 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 SHCBP1Q8NEM2 672 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 GRAMD1AQ96CP6 724 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 SLITRK1Q96PX8 696 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 GPR63Q9BZJ6 419 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 ADGBQ8N7X0 1667 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 NBPF26B4DH59 902 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 NCK2O43639 380 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 SCARF1Q14162 830 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 C6orf10Q5SRN2 563 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 ATL2Q8NHH9 583 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 SPACA6W5XKT8 324 aa16.48■□□□□ 0.23
NUCKS1-201ENST00000367142 POLRMTO00411 1230 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms