RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 TRIML2Q8N7C3 387 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 STXBP2Q15833 593 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 TMC3Q7Z5M5 1100 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 C18orf8Q96DM3 657 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 SEMA6BQ9H3T3 888 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 RXFP1Q9HBX9 757 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 MCF2P10911 925 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 PHEXP78562 749 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 PASD1Q8IV76 773 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 ATP5BP06576 529 aaKnown RBP12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 CYP11B2P19099 503 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 UGP2Q16851 508 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 SESTD1Q86VW0 696 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 RIOX1Q9H6W3 641 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 DCLRE1BQ9H816 532 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 DUSP10Q9Y6W6 482 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 GPC3P51654 580 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 JMJD4Q9H9V9 463 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 ZFATQ9P243 1243 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 ENTPD3O75355 529 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 MCL1Q07820 350 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 TRADDQ15628 312 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 XAB2Q9HCS7 855 aaKnown RBP12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 FAM217BQ9NTX9 383 aaPredicted RBP12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 ZC3H7BQ9UGR2 993 aaKnown RBP12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 SUN2Q9UH99 717 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 VHLP40337 213 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 THOC1Q96FV9 657 aaKnown RBP12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 KDM3BQ7LBC6 1761 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 GLI1P08151 1106 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 HSPA13P48723 471 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 PPP2R5CQ13362 524 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 HOXC10Q9NYD6 342 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 ZNF200P98182 395 aaPredicted RBP12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 STRIP1Q5VSL9 837 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 ZNF302Q9NR11 478 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 PEAK1Q9H792 1746 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 PAPOLAP51003 745 aaKnown RBP12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 LONRF1Q17RB8 773 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 PPP6R3Q5H9R7 873 aaPredicted RBP12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 MIGA2Q7L4E1 593 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 PAK5Q9P286 719 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 ITGA8P53708 1063 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 GIPC2Q8TF65 315 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 IL1RAPL1Q9NZN1 696 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 DDX20Q9UHI6 824 aaKnown RBP12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 GEMIN4P57678 1058 aaKnown RBP12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 MTHFD1LQ6UB35 978 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 PPIL6Q8IXY8 311 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 NSL1Q96IY1 281 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 SLC24A2Q9UI40 661 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 TRAF3IP3Q9Y228 551 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 SREBF1P36956 1147 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 CDH6P55285 790 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 NLRP11P59045 1033 aaKnown RBP12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 SLC10A5Q5PT55 438 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 CATSPER3Q86XQ3 398 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 YIPF3Q9GZM5 350 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 RGL1Q9NZL6 768 aa12.43□□□□□ -0.42
CDC42BPA-202ENST00000366764 NDUFB10O96000 172 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 MXD4Q14582 209 aaPredicted RBP12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 SIKE1Q9BRV8 207 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 SMARCAL1Q9NZC9 954 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 TRAPPC3O43617 180 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 EIF3EP60228 445 aaKnown RBP12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 EHD4Q9H223 541 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 OCRLQ01968 901 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 AP1B1Q10567 949 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 MED21Q13503 144 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 ZNF568Q3ZCX4 644 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 KIAA0895Q8NCT3 520 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 MTBPQ96DY7 904 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 SNRPAP09012 282 aaKnown RBP12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 PMLP29590 882 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 PPARGP37231 505 aaPredicted RBP12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 RSPH3Q86UC2 560 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 LONP2Q86WA8 852 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 NPHS2Q9NP85 383 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 NSMCE4AQ9NXX6 385 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 GOLGA8MH3BSY2 632 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 TRPA1O75762 1119 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 GPSM2P81274 684 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 SGSM1Q2NKQ1 1148 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 SCARA5Q6ZMJ2 495 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 SMYD3Q9H7B4 428 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 SHOC2Q9UQ13 582 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 TM9SF1O15321 606 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 MYBP10242 640 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 CUL3Q13618 768 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 RASSF3Q86WH2 238 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 EIF2AQ9BY44 585 aaKnown RBP12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 KLHL8Q9P2G9 620 aaPredicted RBP12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 GABBR1Q9UBS5 961 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 NPHP3-ACAD11A0A0J9YXS1 232 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 IL18RAPO95256 599 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 MAPTP10636 758 aaKnown RBP12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 ZNF844Q08AG5 666 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 PDE1CQ14123 709 aaPredicted RBP12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 XKR3Q5GH77 459 aa12.42□□□□□ -0.42
CDC42BPA-202ENST00000366764 NCAPG2Q86XI2 1143 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms