RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 REXO4Q9GZR2 422 aaKnown RBP0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 GFRA4Q9GZZ7 299 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 NCKIPSDQ9NZQ3 722 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 USP25Q9UHP3 1055 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 PRRC2AP48634 2157 aaKnown RBP0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 VWC2LB2RUY7 222 aa0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 GSPT1P15170 499 aaKnown RBP0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 CASP7P55210 303 aa0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 CD69Q07108 199 aa0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 PAK1Q13153 545 aa0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 CRY1Q16526 586 aa0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 ZNF618Q5T7W0 954 aa0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 FSTL4Q6MZW2 842 aa0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 C16orf59Q7L2K0 433 aa0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 HS2ST1Q7LGA3 356 aa0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 DGLUCYQ7Z3D6 616 aa0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 CHSY1Q86X52 802 aa0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 SPATA2LQ8IUW3 424 aaPredicted RBP0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 NOSTRINQ8IVI9 506 aa0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 LMO3Q8TAP4 145 aa0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 LPIN2Q92539 896 aa0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 ATP2A3Q93084 1043 aa0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 FERMT2Q96AC1 680 aa0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 MED30Q96HR3 178 aa0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 EXOC2Q96KP1 924 aa0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 SPRY4Q9C004 299 aa0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 HEY2Q9UBP5 337 aa0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 PCDHB6Q9Y5E3 794 aa0.53□□□□□ -2.32
RNU6-340P-201ENST00000364005 WDR27A2RRH5 827 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 BLACEA4D250 179 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 ZNF213O14771 459 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 TULP3O75386 442 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 URI1O94763 535 aaPredicted RBP0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 SP1P08047 785 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 EBLN1P0CF75 366 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 CYP19A1P11511 503 aaPredicted RBP0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 ZNF10P21506 573 aaPredicted RBP0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 COMPP49747 757 aaPredicted RBP0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 HNRNPA3P51991 378 aaKnown RBP0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 BCAR1P56945 870 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 SRSF1Q07955 248 aaKnown RBP eCLIP0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 UBXN2BQ14CS0 331 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 NTRK3Q16288 839 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 FAM76BQ5HYJ3 339 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 STYK1Q6J9G0 422 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 FBXO33Q7Z6M2 555 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 RBM23Q86U06 439 aaKnown RBP0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 UNC5BQ8IZJ1 945 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 FANCBQ8NB91 859 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 OR6P1Q8NGX9 317 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 SLC35B2Q8TB61 432 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 MYCBPAPQ8TBZ2 947 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 ASB5Q8WWX0 329 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 SSH1Q8WYL5 1049 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 DLG3Q92796 817 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 NEUROG1Q92886 237 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 CUL5Q93034 780 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 E2F7Q96AV8 911 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 CEP95Q96GE4 821 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 MAML3Q96JK9 1138 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 ASB2Q96Q27 587 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 CDC5LQ99459 802 aaKnown RBP0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 FAM118BQ9BPY3 351 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 ANO3Q9BYT9 981 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 ARHGAP39Q9C0H5 1083 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 RMI1Q9H9A7 625 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 MRS2Q9HD23 443 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 INTS13Q9NVM9 706 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 MRPS18AQ9NVS2 196 aaKnown RBP0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 SCAF8Q9UPN6 1271 aaKnown RBP0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 GNEQ9Y223 722 aaKnown RBP0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 HS3ST3B1Q9Y662 390 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 ASXL2Q76L83 1435 aa0.52□□□□□ -2.33
RNU6-340P-201ENST00000364005 A0A0A6YYJ9 748 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 FZD9O00144 591 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 PAK4O96013 591 aaPredicted RBP0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 FAM163BP0C2L3 166 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 SRGAP2CP0DJJ0 459 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 NR2F6P10588 404 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 GCSHP23434 173 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 GATA3P23771 443 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 CDC25AP30304 524 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 CLRN1P58418 232 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 PPP2R2AP63151 447 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 LACTBP83111 547 aaPredicted RBP0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 FCN2Q15485 313 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 TCEA2Q15560 299 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 MST1LQ2TV78 715 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 C14orf177Q52M58 125 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 ZNF318Q5VUA4 2279 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 PRAMEF9Q5VWM5 478 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 CC2D1AQ6P1N0 951 aaPredicted RBP0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 PDXDC1Q6P996 788 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 PNPLA7Q6ZV29 1317 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 SLC29A4Q7RTT9 530 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 TAS1R1Q7RTX1 841 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 LYG1Q8N1E2 194 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 ARFGAP1Q8N6T3 406 aa0.51□□□□□ -2.33
RNU6-340P-201ENST00000364005 PCDH19Q8TAB3 1148 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms