RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 RNF19AQ9NV58 838 aa0.67□□□□□ -2.3
RNU6-228P-201ENST00000362700 LRP2BPQ9P2M1 347 aa0.67□□□□□ -2.3
RNU6-228P-201ENST00000362700 HEY2Q9UBP5 337 aa0.67□□□□□ -2.3
RNU6-228P-201ENST00000362700 ZMYM2Q9UBW7 1377 aa0.67□□□□□ -2.3
RNU6-228P-201ENST00000362700 FCHO1O14526 889 aa0.66□□□□□ -2.3
RNU6-228P-201ENST00000362700 GSPT1P15170 499 aaKnown RBP0.66□□□□□ -2.3
RNU6-228P-201ENST00000362700 KRT15P19012 456 aa0.66□□□□□ -2.3
RNU6-228P-201ENST00000362700 CRIP2P52943 208 aaPredicted RBP0.66□□□□□ -2.3
RNU6-228P-201ENST00000362700 POU5F1BQ06416 359 aa0.66□□□□□ -2.3
RNU6-228P-201ENST00000362700 LMAN2Q12907 356 aa0.66□□□□□ -2.3
RNU6-228P-201ENST00000362700 PSMD2Q13200 908 aa0.66□□□□□ -2.3
RNU6-228P-201ENST00000362700 BFSP2Q13515 415 aa0.66□□□□□ -2.3
RNU6-228P-201ENST00000362700 IZUMO4Q1ZYL8 232 aa0.66□□□□□ -2.3
RNU6-228P-201ENST00000362700 C14orf177Q52M58 125 aa0.66□□□□□ -2.3
RNU6-228P-201ENST00000362700 VHLLQ6RSH7 139 aa0.66□□□□□ -2.3
RNU6-228P-201ENST00000362700 USP53Q70EK8 1073 aa0.66□□□□□ -2.3
RNU6-228P-201ENST00000362700 SLC29A4Q7RTT9 530 aa0.66□□□□□ -2.3
RNU6-228P-201ENST00000362700 ZNF227Q86WZ6 799 aa0.66□□□□□ -2.3
RNU6-228P-201ENST00000362700 LMO3Q8TAP4 145 aa0.66□□□□□ -2.3
RNU6-228P-201ENST00000362700 FUBP3Q96I24 572 aaKnown RBP eCLIP0.66□□□□□ -2.3
RNU6-228P-201ENST00000362700 ZFYVE19Q96K21 471 aa0.66□□□□□ -2.3
RNU6-228P-201ENST00000362700 EXOC2Q96KP1 924 aa0.66□□□□□ -2.3
RNU6-228P-201ENST00000362700 ANO3Q9BYT9 981 aa0.66□□□□□ -2.3
RNU6-228P-201ENST00000362700 OSBPL6Q9BZF3 934 aa0.66□□□□□ -2.3
RNU6-228P-201ENST00000362700 PCDHGB1Q9Y5G3 927 aa0.66□□□□□ -2.3
RNU6-228P-201ENST00000362700 FNDC1Q4ZHG4 1894 aaPredicted RBP0.65□□□□□ -2.3
RNU6-228P-201ENST00000362700 DSCR3O14972 297 aa0.65□□□□□ -2.31
RNU6-228P-201ENST00000362700 MYF6P23409 242 aa0.65□□□□□ -2.31
RNU6-228P-201ENST00000362700 HOXD9P28356 352 aaPredicted RBP0.65□□□□□ -2.31
RNU6-228P-201ENST00000362700 LMO4P61968 165 aa0.65□□□□□ -2.31
RNU6-228P-201ENST00000362700 ROM1Q03395 351 aa0.65□□□□□ -2.31
RNU6-228P-201ENST00000362700 LTBQ06643 244 aa0.65□□□□□ -2.31
RNU6-228P-201ENST00000362700 KCNC3Q14003 757 aa0.65□□□□□ -2.31
RNU6-228P-201ENST00000362700 SPINK14Q6IE38 97 aa0.65□□□□□ -2.31
RNU6-228P-201ENST00000362700 CHSY1Q86X52 802 aa0.65□□□□□ -2.31
RNU6-228P-201ENST00000362700 ZZZ3Q8IYH5 903 aa0.65□□□□□ -2.31
RNU6-228P-201ENST00000362700 FANCBQ8NB91 859 aa0.65□□□□□ -2.31
RNU6-228P-201ENST00000362700 KCTD13Q8WZ19 329 aa0.65□□□□□ -2.31
RNU6-228P-201ENST00000362700 ALG1Q9BT22 464 aa0.65□□□□□ -2.31
RNU6-228P-201ENST00000362700 LCE3DQ9BYE3 92 aa0.65□□□□□ -2.31
RNU6-228P-201ENST00000362700 C6orf106Q9H6K1 298 aaPredicted RBP0.65□□□□□ -2.31
RNU6-228P-201ENST00000362700 SCAF8Q9UPN6 1271 aaKnown RBP0.65□□□□□ -2.31
RNU6-228P-201ENST00000362700 AATKQ6ZMQ8 1374 aa0.65□□□□□ -2.31
RNU6-228P-201ENST00000362700 A0A1W2PQH9 124 aa0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 FZD9O00144 591 aa0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 AMY2AP04746 511 aa0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 RNF224P0DH78 156 aa0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 GAAP10253 952 aa0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 CYP19A1P11511 503 aaPredicted RBP0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 AMY2BP19961 511 aa0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 FXR1P51114 621 aaKnown RBP eCLIP0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 PGGT1BP53609 377 aa0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 HNRNPKP61978 463 aaKnown RBP eCLIP0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 GHRHRQ02643 423 aa0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 SEC23AQ15436 765 aa0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 PMS2CLQ68D20 193 aa0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 TSHZ1Q6ZSZ6 1077 aa0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 MED25Q71SY5 747 aa0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 OSTM1Q86WC4 334 aa0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 C19orf47Q8N9M1 422 aaKnown RBP0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 ASB5Q8WWX0 329 aa0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 SSH1Q8WYL5 1049 aa0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 E2F7Q96AV8 911 aa0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 CCDC97Q96F63 343 aaPredicted RBP0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 ZFYVE21Q9BQ24 234 aa0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 MYLK2Q9H1R3 596 aa0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 TCF7L2Q9NQB0 619 aa0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 CATSPERZQ9NTU4 200 aa0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 USP25Q9UHP3 1055 aa0.64□□□□□ -2.31
RNU6-228P-201ENST00000362700 A0A1B0GUV1 79 aa0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 RASSF10A6NK89 507 aa0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 A8MU10 97 aa0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 KCNK3O14649 394 aa0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 GPR85P60893 370 aa0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 SLC6A3Q01959 620 aa0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 MAP4K2Q12851 820 aa0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 ZNF268Q14587 947 aaPredicted RBP0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 ZNF718Q3SXZ3 478 aa0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 UNC5BQ8IZJ1 945 aa0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 MUC20Q8N307 709 aaPredicted RBP0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 WDSUB1Q8N9V3 476 aa0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 PUM2Q8TB72 1066 aaKnown RBP eCLIP0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 LPIN2Q92539 896 aa0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 TBC1D5Q92609 795 aa0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 MIB2Q96AX9 1013 aa0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 CRBNQ96SW2 442 aa0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 CDC5LQ99459 802 aaKnown RBP0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 TRAF4Q9BUZ4 470 aaPredicted RBP0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 KCNH7Q9NS40 1196 aa0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 PI4KBQ9UBF8 816 aa0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 PPT2Q9UMR5 302 aa0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 AGRNO00468 2067 aa0.63□□□□□ -2.31
RNU6-228P-201ENST00000362700 ADAMTS9Q9P2N4 1935 aa0.62□□□□□ -2.31
RNU6-228P-201ENST00000362700 DENND3A2RUS2 1198 aa0.62□□□□□ -2.31
RNU6-228P-201ENST00000362700 RASGRP1O95267 797 aa0.62□□□□□ -2.31
RNU6-228P-201ENST00000362700 PKMP14618 531 aaKnown RBP0.62□□□□□ -2.31
RNU6-228P-201ENST00000362700 GLIPR1P48060 266 aa0.62□□□□□ -2.31
RNU6-228P-201ENST00000362700 KIAA1755Q5JYT7 1200 aa0.62□□□□□ -2.31
RNU6-228P-201ENST00000362700 ZNF804AQ7Z570 1209 aa0.62□□□□□ -2.31
RNU6-228P-201ENST00000362700 SLC30A5Q8TAD4 765 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms