RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 ADGRA3Q8IWK6 1321 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 PLS3P13797 630 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 PAX7P23759 505 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 CNGA1P29973 690 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 PDE6CP51160 858 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 TNFAIP8L3Q5GJ75 292 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 SV2AQ7L0J3 742 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 ERICH1Q86X53 443 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 RPS6KC1Q96S38 1066 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 C11orf70Q9BRQ4 267 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 RAVER2Q9HCJ3 691 aaKnown RBP11.28□□□□□ -0.6
SMC3-201ENST00000361804 A1CFQ9NQ94 594 aaKnown RBP11.28□□□□□ -0.6
SMC3-201ENST00000361804 SUFUQ9UMX1 484 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 USP15Q9Y4E8 981 aaPredicted RBP11.28□□□□□ -0.6
SMC3-201ENST00000361804 USP34Q70CQ2 3546 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 CYP1A2P05177 515 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 CLNS1AP54105 237 aaKnown RBP11.28□□□□□ -0.6
SMC3-201ENST00000361804 NAA25Q14CX7 972 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 ARMC9Q7Z3E5 817 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 SLC9A9Q8IVB4 645 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 FAM213AQ9BRX8 229 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 FHDC1Q9C0D6 1143 aaPredicted RBP11.28□□□□□ -0.6
SMC3-201ENST00000361804 R3HDMLQ9H3Y0 253 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 CNOT7Q9UIV1 285 aaKnown RBP11.28□□□□□ -0.6
SMC3-201ENST00000361804 NAALADL1Q9UQQ1 740 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 DENND3A2RUS2 1198 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 GOLGA8SH3BPF8 625 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 GOLGA8MH3BSY2 632 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 ANP32DO95626 131 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 CCNE2O96020 404 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 GHRP10912 638 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 GBP2P32456 591 aaPredicted RBP11.28□□□□□ -0.6
SMC3-201ENST00000361804 SLMAPQ14BN4 828 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 CYP1B1Q16678 543 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 ZFYVE27Q5T4F4 411 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 C4orf33Q8N1A6 199 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 PARD3BQ8TEW8 1205 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 KLHL29Q96CT2 875 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 TAAR1Q96RJ0 339 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMC3-201ENST00000361804 DIAPH2O60879 1101 aa11.27□□□□□ -0.6
SMC3-201ENST00000361804 EZRP15311 586 aaKnown RBP11.27□□□□□ -0.6
SMC3-201ENST00000361804 NQO1P15559 274 aaKnown RBP11.27□□□□□ -0.6
SMC3-201ENST00000361804 CDR2Q01850 454 aa11.27□□□□□ -0.6
SMC3-201ENST00000361804 GAD2Q05329 585 aa11.27□□□□□ -0.6
SMC3-201ENST00000361804 DNAJC3Q13217 504 aa11.27□□□□□ -0.6
SMC3-201ENST00000361804 ZNF568Q3ZCX4 644 aa11.27□□□□□ -0.6
SMC3-201ENST00000361804 RHBDF2Q6PJF5 856 aa11.27□□□□□ -0.6
SMC3-201ENST00000361804 ANAPC5Q9UJX4 755 aa11.27□□□□□ -0.6
SMC3-201ENST00000361804 ATP8B3O60423 1300 aa11.27□□□□□ -0.61
SMC3-201ENST00000361804 GSTTP1A0A1W2PQM5 241 aa11.27□□□□□ -0.61
SMC3-201ENST00000361804 POC1B-GALNT4F8VUJ3 575 aa11.27□□□□□ -0.61
SMC3-201ENST00000361804 TTC4O95801 387 aa11.27□□□□□ -0.61
SMC3-201ENST00000361804 OAS1P00973 400 aaKnown RBP11.27□□□□□ -0.61
SMC3-201ENST00000361804 HADHBP55084 474 aaKnown RBP11.27□□□□□ -0.61
SMC3-201ENST00000361804 CXCL9Q07325 125 aa11.27□□□□□ -0.61
SMC3-201ENST00000361804 ITIH4Q14624 930 aa11.27□□□□□ -0.61
SMC3-201ENST00000361804 TMX4Q9H1E5 349 aaPredicted RBP11.27□□□□□ -0.61
SMC3-201ENST00000361804 GTF3C4Q9UKN8 822 aa11.27□□□□□ -0.61
SMC3-201ENST00000361804 PTPRJQ12913 1337 aa11.27□□□□□ -0.61
SMC3-201ENST00000361804 TESPA1A2RU30 521 aaPredicted RBP11.27□□□□□ -0.61
SMC3-201ENST00000361804 TBC1D12O60347 775 aa11.27□□□□□ -0.61
SMC3-201ENST00000361804 P4HBP07237 508 aaKnown RBP11.27□□□□□ -0.61
SMC3-201ENST00000361804 STX2P32856 288 aa11.27□□□□□ -0.61
SMC3-201ENST00000361804 NPTX2P47972 431 aa11.27□□□□□ -0.61
SMC3-201ENST00000361804 HSD17B4P51659 736 aa11.27□□□□□ -0.61
SMC3-201ENST00000361804 TKFCQ3LXA3 575 aa11.27□□□□□ -0.61
SMC3-201ENST00000361804 DLK2Q6UY11 383 aa11.27□□□□□ -0.61
SMC3-201ENST00000361804 CYFIP1Q7L576 1253 aa11.27□□□□□ -0.61
SMC3-201ENST00000361804 SPATA21Q7Z572 469 aa11.27□□□□□ -0.61
SMC3-201ENST00000361804 ZNF516Q92618 1163 aa11.27□□□□□ -0.61
SMC3-201ENST00000361804 LRRC19Q9H756 370 aa11.27□□□□□ -0.61
SMC3-201ENST00000361804 RAB20Q9NX57 234 aa11.27□□□□□ -0.61
SMC3-201ENST00000361804 GRID1Q9ULK0 1009 aa11.27□□□□□ -0.61
SMC3-201ENST00000361804 CEP83Q9Y592 693 aa11.27□□□□□ -0.61
SMC3-201ENST00000361804 UMODL1Q5DID0 1318 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 RGS20O76081 388 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 STBD1O95210 358 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 ATF2P15336 505 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 DSG3P32926 999 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 CAP2P40123 477 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 MFAP3P55082 362 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 PPP2R5EQ16537 467 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 ZBTB41Q5SVQ8 909 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 SYCP2LQ5T4T6 812 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 ZNF772Q68DY9 489 aaPredicted RBP11.26□□□□□ -0.61
SMC3-201ENST00000361804 TAOK1Q7L7X3 1001 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 ECHDC2Q86YB7 292 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 TMEM130Q8N3G9 435 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 DCLK3Q9C098 648 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 TAOK3Q9H2K8 898 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 SAE1Q9UBE0 346 aaPredicted RBP11.26□□□□□ -0.61
SMC3-201ENST00000361804 FSCN2O14926 492 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 QARSP47897 775 aaKnown RBP11.26□□□□□ -0.61
SMC3-201ENST00000361804 ACOT2P49753 483 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 WDR4P57081 412 aaKnown RBP11.26□□□□□ -0.61
SMC3-201ENST00000361804 MTMR1Q13613 665 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 KRT39Q6A163 491 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 TXNRD3NBQ6F5E7 133 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 ACAD10Q6JQN1 1059 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms