RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 SCARA3Q6AZY7 606 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 PLPPR4Q7Z2D5 763 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 TPCN2Q8NHX9 752 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 EPS8L1Q8TE68 723 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 MAGOHBQ96A72 148 aaKnown RBP12.42□□□□□ -0.42
HPS1-204ENST00000361490 NTPCRQ9BSD7 190 aaKnown RBP12.42□□□□□ -0.42
HPS1-204ENST00000361490 TUBB2BQ9BVA1 445 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 CDT1Q9H211 546 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 DMGDHQ9UI17 866 aaKnown RBP12.42□□□□□ -0.42
HPS1-204ENST00000361490 PTPRJQ12913 1337 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 A0A0B4J269 797 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 TLDC2A0PJX2 215 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 GPR25O00155 361 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 TREHO43280 583 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 IFNB1P01574 187 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 ZBTB48P10074 688 aaPredicted RBP12.42□□□□□ -0.42
HPS1-204ENST00000361490 ZSCAN20P17040 1043 aaPredicted RBP12.42□□□□□ -0.42
HPS1-204ENST00000361490 EDNRBP24530 442 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 CETN2P41208 172 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 CCDC62Q6P9F0 684 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 DDX42Q86XP3 938 aaKnown RBP eCLIP12.42□□□□□ -0.42
HPS1-204ENST00000361490 C1orf131Q8NDD1 294 aaKnown RBP12.42□□□□□ -0.42
HPS1-204ENST00000361490 RAET1EQ8TD07 263 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 TMC2Q8TDI7 906 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 DNAJC17Q9NVM6 304 aaKnown RBP12.42□□□□□ -0.42
HPS1-204ENST00000361490 VPS18Q9P253 973 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 PCSK1NQ9UHG2 260 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 NFU1Q9UMS0 254 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 MYH10P35580 1976 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 STBD1O95210 358 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 COMTP21964 271 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 SLC26A2P50443 739 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 FKBP1BP68106 108 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 TMEM132DQ14C87 1099 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 C10orf76Q5T2E6 689 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 OLFML2BQ68BL8 750 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 JADE1Q6IE81 842 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 TAPT1Q6NXT6 567 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 ERICH1Q86X53 443 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 SHCBP1Q8NEM2 672 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 PCDHB18PQ96TA0 734 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 MIS12Q9H081 205 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 FER1L6Q2WGJ9 1857 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 PGRMC1O00264 195 aaKnown RBP12.41□□□□□ -0.42
HPS1-204ENST00000361490 MMP3P08254 477 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 MYBPC2Q14324 1141 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 MFSD10Q14728 455 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 FSCN1Q16658 493 aaKnown RBP12.41□□□□□ -0.42
HPS1-204ENST00000361490 ZNF792Q3KQV3 632 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 MTHFD1LQ6UB35 978 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 SAPCD2Q86UD0 394 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 CPNE8Q86YQ8 564 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 BORCS6Q96GS4 357 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 CELF4Q9BZC1 486 aaKnown RBP12.41□□□□□ -0.42
HPS1-204ENST00000361490 TRIM7Q9C029 511 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 ZWILCHQ9H900 591 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 CISHQ9NSE2 258 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 PCDHB2Q9Y5E7 798 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 RTN2O75298 545 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 SMIM10L2AP0DMW4 78 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 SMIM10L2BP0DMW5 78 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 PTENP60484 403 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 PSMD6Q15008 389 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 IQSEC1Q6DN90 963 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 DNAJC24Q6P3W2 148 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 UBLCP1Q8WVY7 318 aaPredicted RBP12.41□□□□□ -0.42
HPS1-204ENST00000361490 RPS6KC1Q96S38 1066 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 CGRRF1Q99675 332 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 HAPLN2Q9GZV7 340 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 KCND1Q9NSA2 647 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 ASAP2O43150 1006 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 ABCD1P33897 745 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 GHRHRQ02643 423 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 IFFO1Q0D2I5 559 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 SREBF2Q12772 1141 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 MOGSQ13724 837 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 SGSM1Q2NKQ1 1148 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 ZACNQ401N2 412 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 C1orf220Q5T0J3 134 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 OR6B2Q6IFH4 312 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 CC2D1AQ6P1N0 951 aaPredicted RBP12.41□□□□□ -0.42
HPS1-204ENST00000361490 HDXQ7Z353 690 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 PPTC7Q8NI37 304 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 FAM149B1Q96BN6 582 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 MRRFQ96E11 262 aaKnown RBP12.41□□□□□ -0.42
HPS1-204ENST00000361490 HPDLQ96IR7 371 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 FGD4Q96M96 766 aa12.41□□□□□ -0.42
HPS1-204ENST00000361490 NOC2LQ9Y3T9 749 aaKnown RBP12.41□□□□□ -0.42
HPS1-204ENST00000361490 M0QYV0 167 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 P4HA2O15460 535 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 ATG7O95352 703 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 ITGA4P13612 1032 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 P4HA1P13674 534 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 KCNJ1P48048 391 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 CDHR5Q9HBB8 845 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 CACNG4Q9UBN1 327 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 ASIC3Q9UHC3 531 aa12.4□□□□□ -0.42
HPS1-204ENST00000361490 DIS3Q9Y2L1 958 aaKnown RBP12.4□□□□□ -0.42
HPS1-204ENST00000361490 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.4□□□□□ -0.42
HPS1-204ENST00000361490 DNAH12Q6ZR08 3092 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms