RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 PRR29P0C7W0 189 aa21.35■■□□□ 1.01
SMURF1-202ENST00000361368 STK33Q9BYT3 514 aa21.35■■□□□ 1.01
SMURF1-202ENST00000361368 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.35■■□□□ 1.01
SMURF1-202ENST00000361368 SESN2P58004 480 aaPredicted RBP21.34■■□□□ 1.01
SMURF1-202ENST00000361368 NCOA4Q13772 614 aa21.34■■□□□ 1.01
SMURF1-202ENST00000361368 RARS2Q5T160 578 aaKnown RBP21.34■■□□□ 1.01
SMURF1-202ENST00000361368 C16orf87Q6PH81 154 aa21.34■■□□□ 1.01
SMURF1-202ENST00000361368 GOLPH3LQ9H4A5 285 aa21.34■■□□□ 1.01
SMURF1-202ENST00000361368 DAGLAQ9Y4D2 1042 aa21.34■■□□□ 1.01
SMURF1-202ENST00000361368 SAMD9LQ8IVG5 1584 aa21.34■■□□□ 1.01
SMURF1-202ENST00000361368 NR3C2P08235 984 aa21.34■■□□□ 1.01
SMURF1-202ENST00000361368 NMT1P30419 496 aaKnown RBP21.34■■□□□ 1.01
SMURF1-202ENST00000361368 CPT1AP50416 773 aa21.34■■□□□ 1.01
SMURF1-202ENST00000361368 EMC2Q15006 297 aa21.34■■□□□ 1.01
SMURF1-202ENST00000361368 HHIPL2Q6UWX4 724 aa21.34■■□□□ 1.01
SMURF1-202ENST00000361368 ICA1LQ8NDH6 482 aa21.34■■□□□ 1.01
SMURF1-202ENST00000361368 FAM161BQ96MY7 647 aa21.34■■□□□ 1.01
SMURF1-202ENST00000361368 GIMAP4Q9NUV9 329 aa21.34■■□□□ 1.01
SMURF1-202ENST00000361368 PRMT7Q9NVM4 692 aaPredicted RBP21.34■■□□□ 1.01
SMURF1-202ENST00000361368 LATS2Q9NRM7 1088 aa21.34■■□□□ 1.01
SMURF1-202ENST00000361368 APEX2Q9UBZ4 518 aa21.34■■□□□ 1.01
SMURF1-202ENST00000361368 LRRIQ3A6PVS8 624 aaPredicted RBP21.34■■□□□ 1.01
SMURF1-202ENST00000361368 CHGBP05060 677 aa21.34■■□□□ 1.01
SMURF1-202ENST00000361368 MRPS25P82663 173 aaKnown RBP21.34■■□□□ 1.01
SMURF1-202ENST00000361368 GPRC5AQ8NFJ5 357 aa21.34■■□□□ 1.01
SMURF1-202ENST00000361368 PTPRN2Q92932 1015 aa21.34■■□□□ 1.01
SMURF1-202ENST00000361368 PPCSQ9HAB8 311 aa21.34■■□□□ 1.01
SMURF1-202ENST00000361368 TTC26A0AVF1 554 aa21.34■■□□□ 1.01
SMURF1-202ENST00000361368 ALDH1A3P47895 512 aa21.34■■□□□ 1.01
SMURF1-202ENST00000361368 TMEM143Q96AN5 459 aa21.34■■□□□ 1.01
SMURF1-202ENST00000361368 ARHGEF9O43307 516 aa21.33■■□□□ 1.01
SMURF1-202ENST00000361368 UPP2O95045 317 aa21.33■■□□□ 1.01
SMURF1-202ENST00000361368 NSUN4Q96CB9 384 aaKnown RBP21.33■■□□□ 1.01
SMURF1-202ENST00000361368 PP2D1A8MPX8 630 aa21.33■■□□□ 1.01
SMURF1-202ENST00000361368 HARS2P49590 506 aaKnown RBP21.33■■□□□ 1.01
SMURF1-202ENST00000361368 SBK1Q52WX2 424 aa21.33■■□□□ 1.01
SMURF1-202ENST00000361368 AARS2Q5JTZ9 985 aaKnown RBP21.33■■□□□ 1.01
SMURF1-202ENST00000361368 SPDYAQ5MJ70 313 aa21.33■■□□□ 1.01
SMURF1-202ENST00000361368 LMBRD2Q68DH5 695 aaPredicted RBP21.33■■□□□ 1.01
SMURF1-202ENST00000361368 CCSER1Q9C0I3 900 aa21.33■■□□□ 1.01
SMURF1-202ENST00000361368 NCK2O43639 380 aa21.33■■□□□ 1
SMURF1-202ENST00000361368 CYP2B6P20813 491 aa21.33■■□□□ 1
SMURF1-202ENST00000361368 LRRC8BQ6P9F7 803 aa21.33■■□□□ 1
SMURF1-202ENST00000361368 ARHGEF26Q96DR7 871 aa21.33■■□□□ 1
SMURF1-202ENST00000361368 RNPC3Q96LT9 517 aaKnown RBP21.33■■□□□ 1
SMURF1-202ENST00000361368 ZNF70Q9UC06 446 aaPredicted RBP21.33■■□□□ 1
SMURF1-202ENST00000361368 H0Y3Z8 333 aa21.33■■□□□ 1
SMURF1-202ENST00000361368 HNRNPRO43390 633 aaKnown RBP21.33■■□□□ 1
SMURF1-202ENST00000361368 PNMA6AP0CW24 399 aaPredicted RBP21.33■■□□□ 1
SMURF1-202ENST00000361368 DGKDQ16760 1214 aa21.33■■□□□ 1
SMURF1-202ENST00000361368 PRUNE1Q86TP1 453 aa21.33■■□□□ 1
SMURF1-202ENST00000361368 OOSP2Q86WS3 158 aa21.33■■□□□ 1
SMURF1-202ENST00000361368 PABPC5Q96DU9 382 aaKnown RBP21.33■■□□□ 1
SMURF1-202ENST00000361368 NT5C1AQ9BXI3 368 aa21.33■■□□□ 1
SMURF1-202ENST00000361368 SMAPO00193 183 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 DAB2P98082 770 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 NUDT12Q9BQG2 462 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 UNC45AQ9H3U1 944 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 ERAP1Q9NZ08 941 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 SMG5Q9UPR3 1016 aaKnown RBP21.32■■□□□ 1
SMURF1-202ENST00000361368 PKP3Q9Y446 797 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 KIF1BO60333 1816 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 HBP1O60381 514 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 HMBSP08397 361 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 RPS12P25398 132 aaKnown RBP21.32■■□□□ 1
SMURF1-202ENST00000361368 CHRNA5P30532 468 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 PNPLA4P41247 253 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 MGAT5BQ3V5L5 792 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 SLC7A14Q8TBB6 771 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 FAM151AQ8WW52 585 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 PLA2G12BQ9BX93 195 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 PCDHB7Q9Y5E2 793 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 GOLGA8TH3BQL2 631 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 GGCXP38435 758 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 CUL3Q13618 768 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 OTULINQ96BN8 352 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 SLITRK1Q96PX8 696 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 JCADQ9P266 1359 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 SPATA31E1Q6ZUB1 1445 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 SHROOM2Q13796 1616 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 MTSS1O43312 755 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 CYP2C9P11712 490 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 PDK1Q15118 436 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 KDELC2Q7Z4H8 507 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 STAG2Q8N3U4 1231 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 OPTNQ96CV9 577 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 CLMNQ96JQ2 1002 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 RGL1Q9NZL6 768 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 HDAC6Q9UBN7 1215 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 HECW2Q9P2P5 1572 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 ZNF521Q96K83 1311 aa21.32■■□□□ 1
SMURF1-202ENST00000361368 NDUFB10O96000 172 aa21.31■■□□□ 1
SMURF1-202ENST00000361368 STAG3L1P0CL83 205 aa21.31■■□□□ 1
SMURF1-202ENST00000361368 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.31■■□□□ 1
SMURF1-202ENST00000361368 MEFVO15553 781 aaPredicted RBP21.31■■□□□ 1
SMURF1-202ENST00000361368 C4orf22Q6V702 233 aa21.31■■□□□ 1
SMURF1-202ENST00000361368 RNF180Q86T96 592 aa21.31■■□□□ 1
SMURF1-202ENST00000361368 ELMO2Q96JJ3 720 aa21.31■■□□□ 1
SMURF1-202ENST00000361368 ATP6V1G3Q96LB4 118 aa21.31■■□□□ 1
SMURF1-202ENST00000361368 VCPKMTQ9H867 229 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms