RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 CLEC18BQ6UXF7 455 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 CLEC18CQ8NCF0 446 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 C2orf15Q8WU43 125 aaKnown RBP6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 KIF12Q96FN5 646 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 APOL6Q9BWW8 343 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 INSL5Q9Y5Q6 135 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 BACH1O14867 736 aa6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 APBB3O95704 486 aa6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 NTRK1P04629 796 aa6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 EIF2DP41214 584 aaKnown RBP6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 NECTIN1Q15223 517 aa6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 DCAF4L1Q3SXM0 396 aa6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 DHX32Q7L7V1 743 aaKnown RBP6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 CATSPER4Q7RTX7 472 aa6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 LRRC71Q8N4P6 559 aa6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 BBC3Q96PG8 261 aaPredicted RBP6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 FAM205CA6NFA0 338 aa6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 N4BP3O15049 544 aa6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 KIF4AO95239 1232 aa6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 PROZP22891 400 aa6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 SMARCB1Q12824 385 aa6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 PKDCCQ504Y2 493 aa6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 XKR5Q6UX68 686 aa6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 TMEM87AQ8NBN3 555 aa6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 SPATA18Q8TC71 538 aa6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 PSPC1Q8WXF1 523 aaKnown RBP6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 SUSD3Q96L08 255 aa6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 SLC32A1Q9H598 525 aa6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 XPNPEP1Q9NQW7 623 aa6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 MRPS23Q9Y3D9 190 aaKnown RBP6.65□□□□□ -1.34
CDC42SE2-201ENST00000360515 SMCO2A6NFE2 343 aa6.65□□□□□ -1.35
CDC42SE2-201ENST00000360515 NRG2O14511 850 aaPredicted RBP6.65□□□□□ -1.35
CDC42SE2-201ENST00000360515 ADAM12O43184 909 aa6.65□□□□□ -1.35
CDC42SE2-201ENST00000360515 SCP2P22307 547 aa6.65□□□□□ -1.35
CDC42SE2-201ENST00000360515 MCM2P49736 904 aa6.65□□□□□ -1.35
CDC42SE2-201ENST00000360515 AK2P54819 239 aa6.65□□□□□ -1.35
CDC42SE2-201ENST00000360515 NTHL1P78549 312 aa6.65□□□□□ -1.35
CDC42SE2-201ENST00000360515 SHKBP1Q8TBC3 707 aa6.65□□□□□ -1.35
CDC42SE2-201ENST00000360515 ACDQ96AP0 544 aa6.65□□□□□ -1.35
CDC42SE2-201ENST00000360515 EIF2AQ9BY44 585 aaKnown RBP6.65□□□□□ -1.35
CDC42SE2-201ENST00000360515 ZDHHC5Q9C0B5 715 aa6.65□□□□□ -1.35
CDC42SE2-201ENST00000360515 OSGEPQ9NPF4 335 aa6.65□□□□□ -1.35
CDC42SE2-201ENST00000360515 PILRBQ9UKJ0 227 aa6.65□□□□□ -1.35
CDC42SE2-201ENST00000360515 THADAQ6YHU6 1953 aa6.65□□□□□ -1.35
CDC42SE2-201ENST00000360515 GCN1Q92616 2671 aaKnown RBP6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 MEFVO15553 781 aaPredicted RBP6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 EPB41L2O43491 1005 aaKnown RBP6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 CDK4P11802 303 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 GCFC2P16383 781 aaKnown RBP6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 CYP3A5P20815 502 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 GNA11P29992 359 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 NOVA1P51513 510 aaKnown RBP6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 C19orf57Q0VDD7 668 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 TFDP1Q14186 410 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 EPHA7Q15375 998 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 NPY5RQ15761 445 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 APOA5Q6Q788 366 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 PRR23BQ6ZRT6 265 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 METTL3Q86U44 580 aaKnown RBP6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 METTL13Q8N6R0 699 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 SLC7A14Q8TBB6 771 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 BRD9Q9H8M2 597 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 PTPRHQ9HD43 1115 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 CNTN3Q9P232 1028 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 CAVIN2O95810 425 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 P4HBP07237 508 aaKnown RBP6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 CD59P13987 128 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 SRSF1Q07955 248 aaKnown RBP eCLIP6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 NTRK3Q16288 839 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 IGF2-ASQ6U949 168 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 RUFY2Q8WXA3 655 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 PRMT7Q9NVM4 692 aaPredicted RBP6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 PCDHB8Q9UN66 801 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 ATG2BQ96BY7 2078 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 CYP11A1P05108 521 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 ARF4P18085 180 aaPredicted RBP6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 CHMLP26374 656 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 LRPAP1P30533 357 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 MLH1P40692 756 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 P2RY2P41231 377 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 SCNN1GP51170 649 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 ROR1Q01973 937 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 SP4Q02446 784 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 USP4Q13107 963 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 PDGFRLQ15198 375 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 PRPF31Q8WWY3 499 aaKnown RBP6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 PSMG2Q969U7 264 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 GAD1Q99259 594 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 RNF26Q9BY78 433 aaPredicted RBP6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 CCSER1Q9C0I3 900 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 LSG1Q9H089 658 aaKnown RBP6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 KLK13Q9UKR3 277 aa6.64□□□□□ -1.35
CDC42SE2-201ENST00000360515 HEPACAM2A8MVW5 462 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 STK25O00506 426 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 ABLIM1O14639 778 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 KHNYNO15037 678 aaKnown RBP6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 AXIN1O15169 862 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 TRAPPC3O43617 180 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 IGLV3-19P01714 112 aa6.63□□□□□ -1.35
CDC42SE2-201ENST00000360515 TYMPP19971 482 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms