RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 MMP14P50281 582 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 ACTR2P61160 394 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 MAGOHP61326 146 aaKnown RBP10.16□□□□□ -0.78
CUX1-203ENST00000360264 PDCLQ13371 301 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 PROSER3Q2NL68 480 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 DAB2IPQ5VWQ8 1189 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 PARD6BQ9BYG5 372 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 RIC8BQ9NVN3 520 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 ZNF335Q9H4Z2 1342 aaPredicted RBP10.16□□□□□ -0.78
CUX1-203ENST00000360264 H2AFYO75367 372 aaKnown RBP10.16□□□□□ -0.78
CUX1-203ENST00000360264 FAM9CQ8IZT9 166 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 SLC7A14Q8TBB6 771 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 DTNBP1Q96EV8 351 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 DPP7Q9UHL4 492 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 CDHR2Q9BYE9 1310 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 CARNS1A5YM72 827 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 GPSM2P81274 684 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 GFPT1Q06210 699 aaPredicted RBP10.16□□□□□ -0.78
CUX1-203ENST00000360264 C6orf10Q5SRN2 563 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 TRPC5OSA6NMA1 111 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 EGFRP00533 1210 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 BLVRAP53004 296 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 SCN3BQ9NY72 215 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 ZNF229Q9UJW7 825 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 EVPLLA8MZ36 301 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 KRR1Q13601 381 aaKnown RBP10.16□□□□□ -0.78
CUX1-203ENST00000360264 LATS2Q9NRM7 1088 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 TMEM132BQ14DG7 1078 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 CATSPER3Q86XQ3 398 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 TERB1Q8NA31 727 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 PIGOQ8TEQ8 1089 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 UCMAQ8WVF2 138 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 STRBPQ96SI9 672 aaKnown RBP10.16□□□□□ -0.78
CUX1-203ENST00000360264 WDR47O94967 919 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 CPT1AP50416 773 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 STAT5BP51692 787 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 RBP5P82980 135 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 ARHGAP15Q53QZ3 475 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 PASD1Q8IV76 773 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 EIF2AK1Q9BQI3 630 aaKnown RBP10.16□□□□□ -0.78
CUX1-203ENST00000360264 DTNAQ9Y4J8 743 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 IFNA14P01570 189 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 LLGL1Q15334 1064 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 CDK5RAP1Q96SZ6 601 aaKnown RBP10.16□□□□□ -0.78
CUX1-203ENST00000360264 TUBGCP4Q9UGJ1 667 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 GAS2O43903 313 aaKnown RBP10.16□□□□□ -0.78
CUX1-203ENST00000360264 TWF1Q12792 350 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 ZNF394Q53GI3 561 aa10.16□□□□□ -0.78
CUX1-203ENST00000360264 RRAGDQ9NQL2 400 aaPredicted RBP10.16□□□□□ -0.78
CUX1-203ENST00000360264 NFKBIL1Q9UBC1 381 aaPredicted RBP10.16□□□□□ -0.78
CUX1-203ENST00000360264 H7C4K7 107 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 MAPK1P28482 360 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 PPP3CCP48454 512 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 PKP1Q13835 747 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 HAUS6Q7Z4H7 955 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 CD302Q8IX05 232 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 HIPK4Q8NE63 616 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 VPS50Q96JG6 964 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 APPL1Q9UKG1 709 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 PJA2O43164 708 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 PLEKHA8P1O95397 391 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 MRPS15P82914 257 aaKnown RBP10.15□□□□□ -0.78
CUX1-203ENST00000360264 AMPD2Q01433 879 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 RNF135Q8IUD6 432 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 PAPOLBQ9NRJ5 636 aaKnown RBP10.15□□□□□ -0.78
CUX1-203ENST00000360264 F5H6K3 240 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 KLRC3Q07444 240 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 ADGRF4Q8IZF3 695 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 C11orf70Q9BRQ4 267 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 SNX24Q9Y343 169 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 IPPQ9Y573 584 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 UBA6A0AVT1 1052 aaPredicted RBP10.15□□□□□ -0.78
CUX1-203ENST00000360264 SFI1A8K8P3 1242 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 GRIN3BO60391 1043 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 NOTUMQ6P988 496 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 ZNF512Q96ME7 567 aaPredicted RBP10.15□□□□□ -0.78
CUX1-203ENST00000360264 CAMKK2Q96RR4 588 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 PKP3Q9Y446 797 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 TK2O00142 265 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 FTLP02792 175 aaPredicted RBP10.15□□□□□ -0.78
CUX1-203ENST00000360264 ADCK2Q7Z695 626 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 C18orf8Q96DM3 657 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 ZFYVE28Q9HCC9 887 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 CDY2AQ9Y6F7 541 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 CDY1Q9Y6F8 540 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 POTECB2RU33 542 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 TBX3O15119 743 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 EIF2S1P05198 315 aaKnown RBP10.15□□□□□ -0.78
CUX1-203ENST00000360264 PRKCBP05771 671 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 CUL3Q13618 768 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 PREPLQ4J6C6 727 aaPredicted RBP10.15□□□□□ -0.78
CUX1-203ENST00000360264 ZNF544Q6NX49 715 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 FAM161BQ96MY7 647 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 ELAC2Q9BQ52 826 aaKnown RBP10.15□□□□□ -0.78
CUX1-203ENST00000360264 INTS2Q9H0H0 1204 aaKnown RBP10.15□□□□□ -0.78
CUX1-203ENST00000360264 FOXD4Q12950 439 aaPredicted RBP10.15□□□□□ -0.78
CUX1-203ENST00000360264 XRRA1Q6P2D8 792 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 APEX2Q9UBZ4 518 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 APRTP07741 180 aa10.15□□□□□ -0.78
CUX1-203ENST00000360264 LCP1P13796 627 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms