RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 POLR3CQ9BUI4 534 aaPredicted RBP12.89□□□□□ -0.35
DNMT1-202ENST00000359526 RAVER2Q9HCJ3 691 aaKnown RBP12.89□□□□□ -0.35
DNMT1-202ENST00000359526 WDR35Q9P2L0 1181 aa12.89□□□□□ -0.35
DNMT1-202ENST00000359526 M0QYV0 167 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 ZNF185O15231 689 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 CHRNA5P30532 468 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 ARSEP51690 589 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 EFTUD2Q15029 972 aaKnown RBP eCLIP12.88□□□□□ -0.352e-7■■■■□ 25.9
DNMT1-202ENST00000359526 ZNF394Q53GI3 561 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 RARS2Q5T160 578 aaKnown RBP12.88□□□□□ -0.35
DNMT1-202ENST00000359526 LDHDQ86WU2 507 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 IRX2Q9BZI1 471 aaPredicted RBP12.88□□□□□ -0.35
DNMT1-202ENST00000359526 SMYD3Q9H7B4 428 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 MRGBPQ9NV56 204 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 A0A0G2JLW4 131 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 UCHL3P15374 230 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 ZNF157P51786 506 aaPredicted RBP12.88□□□□□ -0.35
DNMT1-202ENST00000359526 LAMC2Q13753 1193 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 ZNF746Q6NUN9 644 aaPredicted RBP12.88□□□□□ -0.35
DNMT1-202ENST00000359526 NUDT18Q6ZVK8 323 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 COL23A1Q86Y22 540 aaPredicted RBP12.88□□□□□ -0.35
DNMT1-202ENST00000359526 RYBPQ8N488 228 aaPredicted RBP12.88□□□□□ -0.35
DNMT1-202ENST00000359526 ERGIC2Q96RQ1 377 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 PRMT1Q99873 361 aaKnown RBP12.88□□□□□ -0.35
DNMT1-202ENST00000359526 POLR3FQ9H1D9 316 aaPredicted RBP12.88□□□□□ -0.35
DNMT1-202ENST00000359526 TCP11X1B4DZS4 312 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 P4HA2O15460 535 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 HUS1O60921 280 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 TMEM253P0C7T8 217 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 CHN1P15882 459 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 GALCP54803 685 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 LRRC14Q15048 493 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 DNAL1Q4LDG9 190 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 GPC2Q8N158 579 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 TEX9Q8N6V9 391 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 NUDT12Q9BQG2 462 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 MKNK1Q9BUB5 465 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 FSD1LQ9BXM9 530 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 H3BRJ5 948 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 HOXA2O43364 376 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 GYPCP04921 128 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 RFX5P48382 616 aaPredicted RBP12.88□□□□□ -0.35
DNMT1-202ENST00000359526 MTHFD1LQ6UB35 978 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 SLC38A7Q9NVC3 462 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 GTSE1Q9NYZ3 720 aa12.88□□□□□ -0.35
DNMT1-202ENST00000359526 CFAP69A5D8W1 941 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 PIK3R2O00459 728 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 DGAT1O75907 488 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 TRIM49P0CI25 452 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 TRIM49CP0CI26 452 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 CRYMQ14894 314 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 RWDD4Q6NW29 188 aaKnown RBP12.87□□□□□ -0.35
DNMT1-202ENST00000359526 RASSF3Q86WH2 238 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 CEP19Q96LK0 163 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 SNX5Q9Y5X3 404 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 EIF3DO15371 548 aaKnown RBP eCLIP12.87□□□□□ -0.356e-7■■□□□ 13.8
DNMT1-202ENST00000359526 SNX2O60749 519 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 SPAG6O75602 509 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 FGFR4P22455 802 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 FMO5P49326 533 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 DUOXA2Q1HG44 320 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 ZC4H2Q9NQZ6 224 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 RBAKQ9NYW8 714 aaPredicted RBP12.87□□□□□ -0.35
DNMT1-202ENST00000359526 SUCLA2Q9P2R7 463 aaPredicted RBP12.87□□□□□ -0.35
DNMT1-202ENST00000359526 GABBR1Q9UBS5 961 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 AGO2Q9UKV8 859 aaKnown RBP12.87□□□□□ -0.35
DNMT1-202ENST00000359526 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.87□□□□□ -0.35
DNMT1-202ENST00000359526 SLC26A2P50443 739 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 HIC1Q14526 733 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 EFHC2Q5JST6 749 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 SH3TC2Q8TF17 1288 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 AGPAT5Q9NUQ2 364 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 APOL1O14791 398 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 FDPSP14324 419 aaKnown RBP12.87□□□□□ -0.35
DNMT1-202ENST00000359526 CCND1P24385 295 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 SERPINB9P50453 376 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 TRADDQ15628 312 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 CEP55Q53EZ4 464 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 IER5Q5VY09 327 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 SH2D3CQ8N5H7 860 aa12.87□□□□□ -0.35
DNMT1-202ENST00000359526 RANBP17Q9H2T7 1088 aaKnown RBP12.87□□□□□ -0.35
DNMT1-202ENST00000359526 PARP4Q9UKK3 1724 aaKnown RBP12.87□□□□□ -0.35
DNMT1-202ENST00000359526 KITP10721 976 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 LSP1P33241 339 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 ANTXR2P58335 489 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 RBM43Q6ZSC3 357 aaKnown RBP12.86□□□□□ -0.35
DNMT1-202ENST00000359526 SPATA33Q96N06 139 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 ACAP3Q96P50 834 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 ING2Q9H160 280 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 JPH1Q9HDC5 661 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-202ENST00000359526 ANKEF1Q9NU02 776 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 DNAJC6O75061 913 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 IL18RAPO95256 599 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 PGM1P36871 562 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 TSTA3Q13630 321 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-202ENST00000359526 HP1BP3Q5SSJ5 553 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-202ENST00000359526 LRRC31Q6UY01 552 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 USP38Q8NB14 1042 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 OR6J1Q8NGC5 347 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 SEC16BQ96JE7 1060 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms